BAC Information

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BAC

Clone NameB6Ng01-193G09
Chromosome5 (Build37)
Map Location 8,248,757 - 8,425,006
singlet/doubletdoublet
Overlap geneAdam22, Dbf4, Slc25a40
Upstream gene4921511H03Rik, LOC242823, LOC667767, EG546855, Steap4, Sri, LOC433840
Downstream geneGm440, Abcb1a, EG330031, Abcb1b, Abcb4, Crot, 4930420K17Rik, Dmtf1, LOC654361, 9330182L06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193G09.bB6Ng01-193G09.g
ACCGA016382GA016383
length1,0751,113
definitionB6Ng01-193G09.b B6Ng01-193G09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,248,757 - 8,249,829)(8,423,910 - 8,425,006)
sequence
gaattccatttctgattctcactagaaaagaataggcttttatgacatac
agacaaatatgacaaaacgtaacaaagcaagatatcacatggaagttgga
tataacaacacaacaggaggaaacgagtcccaagaacaggcacaggggtc
agagatccactccttctcacagtcaggagtaggactaactttaagaagaa
aatgccaaacctatgtcaagatttacctagctttcccattcatgttctag
aagtaagagatttggttataaaaatgaggcagatatggtagggtatgcca
gtaatcttagaacttgtaaagagtggcaggaagatcatgagttcaagctt
cccaacgcatattctataagtaacatatttgggtattaaaatgagccaga
tatggtaggatatgccagtaatcttagtacatagaaagcagagacatgaa
gatcatgagttcaaggccagcacgatacacagtgaggtcttaaaaataaa
gaaaaagactgaactaagaatggttcaaattaactacatttgctgataat
tactatcttttataatactctgatagtaaagagaatctctttacctcatc
atcagaaatgaagaagagccatgcattcaaagtaaaactgtacccacagc
ttcccttcaccttcccaatcttacatgacctcataactgaatgtcaggta
tggactccaaacctggcaagatccatagcaagagagcaccaccaccactt
gcagcttcatcttctccgtctcctttagaatcccaaaggctagtctaacc
aggccctttacatcagtttatgccagttaccttaggaagctcccattgcc
aactctctaatctctatctggctttgtctcctcccacaactcagctgctt
cacagtcatgatgctttctggaattcacacatggcctatccacagaatcc
atcccttagctgcacttttgtttttgttattttcttcatcatcttgtctc
agagtagcacctccaccagtttcttgagtaggggctatataacttgctat
gggggtcttggtgtaagaagagaga
gaattcaaagccagcctaggctagacagtaagccccaggctaggttggac
tacaagggagactgtctcaaaacaagaaacaagaacataaaccacattca
tttagtcctgattactgacaggatgtgtagagacttctgtcttcatacaa
ccaaactcttcttcctgtggctgctgtaaaacttgggttccatggggtac
taggagttgactaaaaacaaaaaaacaaaaaaacactagtacctaggtgg
tgagtagatgttttgcttattcatagtttggaattataccttacatgaca
cataatgagtctaacatggttccaactctttgattgtcttatctcagaag
aaatataaatcacctttcacaagagcataaaacaacttccagttttattt
tccaaagaaacatgattacatcttttccaaattctgaaaacatcaaagag
agagagagagagaagagagaggaagaaagaaattaagaaaaagaaaacaa
ccccctttcccttcggccacctcttcctctccatcatttctttcttcagt
gtgctccaccatagaggtcaggtccacaggttatctattacttagctaga
ttaccactcaaattgtaattacctctattatcattctaactactcttaag
gaagtgggtggcacctcccaagccaccacagatgcctatagttcaggttt
taaccggtttgaactcggttggggacgaagctgagtcaagtcatcaacat
gacagtaattagaatttttcagttccaggcttactgcttccaagcgcatt
ccccttagtccccctaacagctaagaaccagtactctcttcacagactaa
atcgggagcctcggaattatccaattccctagattagctgggaagctggg
aacaaccaattctgtaaaaaaaattcatttcctcccccaccattatttag
attttgtttcccagtctcttccaactcagcttggctcttcccttctcctc
actcgcacttggcctcaatcccctgactctcacgtcatcttacaaggctc
taacttcagggcattcccccttccctcgtggcctttattctatcctctgt
aatagtgcctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_8248757_8249829
seq2: B6Ng01-193G09.b_47_1121

seq1  GAATTCCATTTCTGATTCTCACTAGAAAAGAATAGGCTTTTATGACATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTCTGATTCTCACTAGAAAAGAATAGGCTTTTATGACATAC  50

seq1  AGACAAATATGACAAAACGTAACAAAGCAAGATATCACATGGAAGTTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAATATGACAAAACGTAACAAAGCAAGATATCACATGGAAGTTGGA  100

seq1  TATAACAACACAACAGGAGGAAACGAGTCCCAAGAACAGGCACAGGGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACAACACAACAGGAGGAAACGAGTCCCAAGAACAGGCACAGGGGTC  150

seq1  AGAGATCCACTCCTTCTCACAGTCAGGAGTAGGACTAACTTTAAGAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATCCACTCCTTCTCACAGTCAGGAGTAGGACTAACTTTAAGAAGAA  200

seq1  AATGCCAAACCTATGTCAAGATTTACCTAGCTTTCCCATTCATGTTCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCAAACCTATGTCAAGATTTACCTAGCTTTCCCATTCATGTTCTAG  250

seq1  AAGTAAGAGATTTGGTTATAAAAATGAGGCAGATATGGTAGGGTATGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGAGATTTGGTTATAAAAATGAGGCAGATATGGTAGGGTATGCCA  300

seq1  GTAATCTTAGAACTTGTAAAGAGTGGCAGGAAGATCATGAGTTCAAGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCTTAGAACTTGTAAAGAGTGGCAGGAAGATCATGAGTTCAAGCTT  350

seq1  CCCAACGCATATTCTATAAGTAACATATTTGGGTATTAAAATGAGCCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACGCATATTCTATAAGTAACATATTTGGGTATTAAAATGAGCCAGA  400

seq1  TATGGTAGGATATGCCAGTAATCTTAGTACATAGAAAGCAGAGACATGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTAGGATATGCCAGTAATCTTAGTACATAGAAAGCAGAGACATGAA  450

seq1  GATCATGAGTTCAAGGCCAGCACGATACACAGTGAGGTCTTAAAAATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATGAGTTCAAGGCCAGCACGATACACAGTGAGGTCTTAAAAATAAA  500

seq1  GAAAAAGACTGAACTAAGAATGGTTCAAATTAACTACATTTGCTGATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGACTGAACTAAGAATGGTTCAAATTAACTACATTTGCTGATAAT  550

seq1  TACTATCTTTTATAATACTCTGATAGTAAAGAGAATCTCTTTACCTCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATCTTTTATAATACTCTGATAGTAAAGAGAATCTCTTTACCTCATC  600

seq1  ATCAGAAATGAAGAAGAGCCATGCATTCAAAGTAAAACTGTACCCACAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAATGAAGAAGAGCCATGCATTCAAAGTAAAACTGTACCCACAGC  650

seq1  TTCCCTTCACCTTCCCAATCTTACATGACCTCATAACTGAATGTCAGGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTCACCTTCCCAATCTTACATGACCTCATAACTGAATGTCAGGTA  700

seq1  TGGACTCCAAACCTGGCAAGATCCATAGCAAGAGAGCACCACCACCACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTCCAAACCTGGCAAGATCCATAGCAAGAGAGCACCACCACCACTT  750

seq1  GCAGCTTCATCTTCTCCGTCTCCTTTAGAATCCCAAAGGCTAGTCTAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTTCATCTTCTCCGTCTCCTTTAGAATCCCAAAGGCTAGTCTAACC  800

seq1  AGGCCCTTTACATCAGTTTATGCCAGTTACCTTAGGAAGCTCCCATTGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCTTTACATCAGTTTATGCCAGTTACCTTAGGAAGCTCCCATTGCC  850

seq1  AACTCTCTAATCTCTATCTGGCTTTGTCTCCTCCCACAACTCAGCTGCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCTAATCTCTATCTGGCTTTGTCTCCTCCCACAACTCAGCTGCTT  900

seq1  CACAGTCATGATGCTTTCTGGAATTCACACATGG-CTATCCACAGAATCC  949
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CACAGTCATGATGCTTTCTGGAATTCACACATGGCCTATCCACAGAATCC  950

seq1  ATCCCTTAGCTGCAACTTTTGTTTTTGTTATTTTCTTCATCATCTTGTTC  999
      ||||||||||||| ||||||||||||||||||||||||||||||||| ||
seq2  ATCCCTTAGCTGC-ACTTTTGTTTTTGTTATTTTCTTCATCATCTTG-TC  998

seq1  TCAGAAGTAGCA-CTCCA-CAGTTTCTTGAGTAGGGGCTATATAACTTTG  1047
      |||| ||||||| ||||| ||||||||||||||||||||||||||| |||
seq2  TCAG-AGTAGCACCTCCACCAGTTTCTTGAGTAGGGGCTATATAAC-TTG  1046

seq1  CTAATGGGGGTC-TGGTG---GTAGAGAGA  1073
      || ||||||||| |||||   | |||||||
seq2  CT-ATGGGGGTCTTGGTGTAAGAAGAGAGA  1075

seq1: chr5_8423910_8425006
seq2: B6Ng01-193G09.g_67_1179 (reverse)

seq1  GAGAAGCACTAATACAGAG--TAGAATTAAAGCCACGAGGGAAGGGGGAA  48
      |||| |||||| |||||||  |||||| || |||||||||||||||||||
seq2  GAGAGGCACTATTACAGAGGATAGAATAAAGGCCACGAGGGAAGGGGGAA  50

seq1  TGCCTTGGAG-TAGAG-CTTGTGAGATGAAGTGGAGAGTCAGGGGA-TGA  95
      |||| || || ||||| ||||| |||||| || ||||||||||||| |||
seq2  TGCCCTGAAGTTAGAGCCTTGTAAGATGACGT-GAGAGTCAGGGGATTGA  99

seq1  GGC--AGTGCGAGTGAGGAGA--GGGAGAG-CAAGCTGAGTTGGAAGAGA  140
      |||  ||||||||||||||||  || |||| |||||||||||||||||||
seq2  GGCCAAGTGCGAGTGAGGAGAAGGGAAGAGCCAAGCTGAGTTGGAAGAGA  149

seq1  CTGGGAA--CAAATCTTAATAATGGT-GGGGAGG-AATGGAATTTTTTTA  186
      |||||||   |||||| ||||||||| ||||||| |||| | ||||||||
seq2  CTGGGAAACAAAATCTAAATAATGGTGGGGGAGGAAATGAATTTTTTTTA  199

seq1  CAGAATTGG-TGGTCCCAGCTTCCCAGCTAATCTA-GGAATTGGATAATT  234
      ||||||||| || |||||||||||||||||||||| ||||||||||||||
seq2  CAGAATTGGTTGTTCCCAGCTTCCCAGCTAATCTAGGGAATTGGATAATT  249

seq1  CCGAGGCT-CCGATTTAGTCTGTGAAGAGAGTACTGGTTCTTAGCTGTTA  283
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGGCTCCCGATTTAGTCTGTGAAGAGAGTACTGGTTCTTAGCTGTTA  299

seq1  GGGGGACTAAGGGGAATGCGCTTGGAAGCAGTAAGCCTGGAACTGAAAAA  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGACTAAGGGGAATGCGCTTGGAAGCAGTAAGCCTGGAACTGAAAAA  349

seq1  TTCTAATTACTGTCATGTTGATGACTTGACTCAGCTTCGTCCCCAACCGA  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATTACTGTCATGTTGATGACTTGACTCAGCTTCGTCCCCAACCGA  399

seq1  GTTCAAACCGGTTAAAACCTGAACTATAGGCATCTGTGGTGGCTTGGGAG  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAACCGGTTAAAACCTGAACTATAGGCATCTGTGGTGGCTTGGGAG  449

seq1  GTGCCACCCACTTCCTTAAGAGTAGTTAGAATGATAATAGAGGTAATTAC  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCACCCACTTCCTTAAGAGTAGTTAGAATGATAATAGAGGTAATTAC  499

seq1  AATTTGAGTGGTAATCTAGCTAAGTAATAGATAACCTGTGGACCTGACCT  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGAGTGGTAATCTAGCTAAGTAATAGATAACCTGTGGACCTGACCT  549

seq1  CTATGGTGGAGCACACTGAAGAAAGAAATGATGGAGAGGAAGAGGTGGCC  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGTGGAGCACACTGAAGAAAGAAATGATGGAGAGGAAGAGGTGGCC  599

seq1  GAAGGGAAAGGGGGTTGTTTTCTTTTTCTTAATTTCTTTCTTCCTCTCTC  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGAAAGGGGGTTGTTTTCTTTTTCTTAATTTCTTTCTTCCTCTCTC  649

seq1  TTCTCTCTCTCTCTCTCTTTGATGTTTTCAGAATTTGGAAAAGATGTAAT  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTCTCTCTCTCTTTGATGTTTTCAGAATTTGGAAAAGATGTAAT  699

seq1  CATGTTTCTTTGGAAAATAAAACTGGAAGTTGTTTTATGCTCTTGTGAAA  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTCTTTGGAAAATAAAACTGGAAGTTGTTTTATGCTCTTGTGAAA  749

seq1  GGTGATTTATATTTCTTCTGAGATAAGACAATCAAAGAGTTGGAACCATG  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATTTATATTTCTTCTGAGATAAGACAATCAAAGAGTTGGAACCATG  799

seq1  TTAGACTCATTATGTGTCATGTAAGGTATAATTCCAAACTATGAATAAGC  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACTCATTATGTGTCATGTAAGGTATAATTCCAAACTATGAATAAGC  849

seq1  AAAACATCTACTCACCACCTAGGTACTAGTGTTTTTTTGTTTTTTTGTTT  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATCTACTCACCACCTAGGTACTAGTGTTTTTTTGTTTTTTTGTTT  899

seq1  TTAGTCAACTCCTAGTACCCCATGGAACCCAAGTTTTACAGCAGCCACAG  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCAACTCCTAGTACCCCATGGAACCCAAGTTTTACAGCAGCCACAG  949

seq1  GAAGAAGAGTTTGGTTGTATGAAGACAGAAGTCTCTACACATCCTGTCAG  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGAGTTTGGTTGTATGAAGACAGAAGTCTCTACACATCCTGTCAG  999

seq1  TAATCAGGACTAAATGAATGTGGTTTATGTTCTTGTTTCTTGTTTTGAGA  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGGACTAAATGAATGTGGTTTATGTTCTTGTTTCTTGTTTTGAGA  1049

seq1  CAGTCTCCCTTGTAGTCCAACCTAGCCTGGGGCTTACTGTCTAGCCTAGG  1083
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCCCTTGTAGTCCAACCTAGCCTGGGGCTTACTGTCTAGCCTAGG  1099

seq1  CTGGCTTTGAATTC  1097
      ||||||||||||||
seq2  CTGGCTTTGAATTC  1113