BAC Information

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BAC

Clone NameB6Ng01-193G22
Chromosome5 (Build37)
Map Location 46,583,072 - 46,584,228
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040737, Qdpr, EG624224, Lap3, LOC100040762, Med28, 9630031F12Rik, 9630001P10Rik, 1600023N17Rik, Lcorl, LOC100041576
Downstream geneEG666103
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193G22.bB6Ng01-193G22.g
ACCGA016405GA016406
length1,1441,146
definitionB6Ng01-193G22.b B6Ng01-193G22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcataattgttttcttcctttagcataaatgatcatgttttctttc
agggataatttttattttgaatataataagtattatgttgttaaatccaa
ccacatgacactgtactactacccactaaattattcagtggtcataaagt
gagggctcccaacctgaatcctcaggtctctttcctccatgtggtacagt
tttaatcaatcagaatctttttaatttggtgtttttacagaattgaatta
tttccaggttaagctcacccaagtagagttgtgattgccatcattccagc
tctgtttggatatctgtccagtttggaatcaaactattctccatgtgtgc
aacacacagtgaagtcactttgtaactgatagcttggggatgaagacttc
caacacagatattgttgttcttcatcaatcagtatgtggagctcaggttc
tcactacccttcaatgatgcgaatggactttttaaagaaccaattaggat
ccttagtactaattctcaaggaagatactgtcttttccttttgttttttc
ttagatattttcttgatttacgtttcaactgctatgcagaaagttctccc
tccccccaccctgttcccttacccacccactcccacttcttggccttggc
attcccctgtactggggcatataaagtttgcaagacacaggggcctctct
tcccaatgatggccacctagacactcttctgctaaatatgcagctagaga
catgagctctgcagtactggttagttcatattgttgttccacatataggg
ttacagaccccttcagtttcttgggtactttctctagctcctctatcggg
ggccctgtgctccatttcaatagatgaatgtgagcatccacttctgttat
ttgccagacactggcatgccttcacaaggagagagatatatcagggttct
ttaagcaaaatcttgctggcatatgcatagtgtctgggttttggtggctg
atatgggatggatccctgggtgagtagctcctgaatggtcatcttcatct
aacttcaaccttgtcctgtactctctctatggattttgtcctatttaaaa
gaatgaagatcaacatgcttcactctcatttctggtgtttgcac
gaattctcacagcgaatatgcctatcaagagtgatgcgccagataatcca
aagggcttggacagaggactttctgtgcatttaccctaaagaaaggattc
aaaaaataaaaggagaagactgctgcacgtacttctaattaaacatacaa
gtacacatgggctgaatatcaacatcacatgatactccataaatatgaac
aatctttattgttcatccattagttaaaaatactgatgagaaagtaaggg
aaaatagaggaaaataaagatgttggaaacatgcaaaaaataaaggattg
atgaacaatggtcttacattacaataaaatttaaaaaaaaatagctttct
gaaccaatgggatggtaacaatggaaatctgtctttatacagcacaacat
gggggcccaggaatgttcaatctccgagtaaatataaatgatttctgtct
tatgtgtaaaatgactttatgattgactgaaaaaggcttcattacaaaat
gtcatgggttttatagcaagtataaaaagtagcacttgtcataaatttac
atcactaaagctgaactgaaatagaagtgtgctattgtaaagttcctgtc
catgtgtgaagcagtatcacactacctcacagcattatgatgagtggaat
ttgttctgcaaaatatctaaaatatataatgtttataaaagaagaaaaga
aatcataaaattacaaaaccaacagaataagaataacaaagaaaaggaga
aacagaaatggtaatagattaaataagtcaaaacaaatgccatgtgtatt
aggtactttactgttaatgtggtaaaacatcacaatcaaaagcatcttat
atatattgcagcttaagttccagagtgaagtgcatagtgacaagggagcc
atggagaaagccaatatccaactacatactggtcacaagattatacacta
tcatacaaatgtacatactcagtcctaaacaagcgcatcttacattcacc
tcctccaattatgctccacaagggctaagtgtaagaggagttagcagttt
gtcagagacaatggggatgcgacattcagaagagtgcccttaaacacaac
ggactggacgagtatgaccaaacgactggtagcacaccaggctgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_46583072_46584228
seq2: B6Ng01-193G22.g_67_1212

seq1  GAATTCTCACAGCGAATATGCCTATCAAGAGTGATGCGCCAGATAATCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACAGCGAATATGCCTATCAAGAGTGATGCGCCAGATAATCCA  50

seq1  AAGGGCTTGGACAGAGGACTTTCTGTGCATTTACCCTAAAGAAAGGATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCTTGGACAGAGGACTTTCTGTGCATTTACCCTAAAGAAAGGATTC  100

seq1  AAAAAATAAAAGGAGAAGACTGCTGCACGTACTTCTAATTAAACATACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAAAAGGAGAAGACTGCTGCACGTACTTCTAATTAAACATACAA  150

seq1  GTACACATGGGCTGAATATCAACATCACATGATACTCCATAAATATGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACATGGGCTGAATATCAACATCACATGATACTCCATAAATATGAAC  200

seq1  AATCTTTATTGTTCATCCATTAGTTAAAAATACTGATGAGAAAGTAAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTATTGTTCATCCATTAGTTAAAAATACTGATGAGAAAGTAAGGG  250

seq1  AAAATAGAGGAAAATAAAGATGTTGGAAACATGCAAAAAATAAAGGATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGAGGAAAATAAAGATGTTGGAAACATGCAAAAAATAAAGGATTG  300

seq1  ATGAACAATGGTCTTACATTACAATAAAATTTAAAAAAAAATAGCTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACAATGGTCTTACATTACAATAAAATTTAAAAAAAAATAGCTTTCT  350

seq1  GAACCAATGGGATGGTAACAATGGAAATCTGTCTTTATACAGCACAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAATGGGATGGTAACAATGGAAATCTGTCTTTATACAGCACAACAT  400

seq1  GGGGGCCCAGGAATGTTCAATCTCCGAGTAAATATAAATGATTTCTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCCCAGGAATGTTCAATCTCCGAGTAAATATAAATGATTTCTGTCT  450

seq1  TATGTGTAAAATGACTTTATGATTGACTGAAAAAGGCTTCATTACAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTAAAATGACTTTATGATTGACTGAAAAAGGCTTCATTACAAAAT  500

seq1  GTCATGGGTTTTATAGCAAGTATAAAAAGTAGCACTTGTCATAAATTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGGGTTTTATAGCAAGTATAAAAAGTAGCACTTGTCATAAATTTAC  550

seq1  ATCACTAAAGCTGAACTGAAATAGAAGTGTGCTATTGTAAAGTTCCTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTAAAGCTGAACTGAAATAGAAGTGTGCTATTGTAAAGTTCCTGTC  600

seq1  CATGTGTGAAGCAGTATCACACTACCTCACAGCATTATGATGAGTGGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTGAAGCAGTATCACACTACCTCACAGCATTATGATGAGTGGAAT  650

seq1  TTGTTCTGCAAAATATCTAAAATATATAATGTTTATAAAAGAAGAAAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTGCAAAATATCTAAAATATATAATGTTTATAAAAGAAGAAAAGA  700

seq1  AATCATAAAATTACAAAACCAACAGAATAAGAATAACAAAGAAAAGGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATAAAATTACAAAACCAACAGAATAAGAATAACAAAGAAAAGGAGA  750

seq1  AACAGAAATGGTAATAGATTAAATAAGTCAAAACAAATGCCATGTGTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAATGGTAATAGATTAAATAAGTCAAAACAAATGCCATGTGTATT  800

seq1  AGGTACTTTACTGTTAATGTGGTAAAACATCACAATCAAAAGCATCTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACTTTACTGTTAATGTGGTAAAACATCACAATCAAAAGCATCTTAT  850

seq1  ATATATTGCAGCTTAAGTTCCAGAGTGAAGGTGCATAGTGACAAGGGAGC  900
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATATATTGCAGCTTAAGTTCCAGAGTGAA-GTGCATAGTGACAAGGGAGC  899

seq1  CATGGAGAAAGCCAATATCCAACTACATACTGGTCACAAGA-TATACACT  949
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CATGGAGAAAGCCAATATCCAACTACATACTGGTCACAAGATTATACACT  949

seq1  ATCATACAAATGTACATACTCAGTCCTAAAC-AGCGCATC-TACATTCAA  997
      ||||||||||||||||||||||||||||||| |||||||| |||||||| 
seq2  ATCATACAAATGTACATACTCAGTCCTAAACAAGCGCATCTTACATTCAC  999

seq1  CCTCTCCCATTATGGCTCAC-AGGGCTAAGTGGTAGAGGAGGTAGCAAGT  1046
      |  |||| ||||||   ||| |||||||||||  ||||||| |||| |||
seq2  CTCCTCCAATTATGCTCCACAAGGGCTAAGTGTAAGAGGAGTTAGC-AGT  1048

seq1  TTGTCAGAGACAATGGGGATGGCAGACATCAAGGAAAGAGTG-CCTTAAA  1095
      |||||||||||||||||||||   |||||  ||  ||||||| |||||||
seq2  TTGTCAGAGACAATGGGGATG--CGACATTCAG--AAGAGTGCCCTTAAA  1094

seq1  CACACAACCGGACTGACAGAAGTATGACCAAACAGACTGTGGTAGCACAC  1145
      |||   | |||||||  |  ||||||||||||| |||  |||||||||||
seq2  CAC---AACGGACTG-GACGAGTATGACCAAAC-GAC--TGGTAGCACAC  1137

seq1  ACAGGGCCTGCA  1157
       ||||  |||||
seq2  -CAGG--CTGCA  1146