BAC Information

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BAC

Clone NameB6Ng01-193K17
Chromosome5 (Build37)
Map Location 140,432,132 - 140,432,834
singlet/doubletsinglet
Overlap geneA930017N06Rik
Upstream genePdgfa, Prkar1b, Heatr2, Unc84a, 1110007L15Rik, Centa1, Cox19, Cyp2w1, 3110082I17Rik, D830046C22Rik, Gpr146, C130050O18Rik, Gpr30, Zfand2a, Uncx4.1, LOC100041200, LOC100041209, LOC100041217, Micall2, Ints1, Mafk, BC019731, 1810042K04Rik
Downstream geneLOC100041270, Mad1l1, Ftsj2, Nudt1, Snx8, Eif3s9, LOC100041291, EG231836, Chst12, Grifin, Lfng, Ttyh3, Iqce, AA881470, 6530401C20Rik, Gna12, Card11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193K17.bB6Ng01-193K17.g
ACCGA016577GA016578
length746703
definitionB6Ng01-193K17.b B6Ng01-193K17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ggaattcttttttatcccaggataattgtagtttcttacttttttgtttt
ataggtgtgtggttgagtatgtatatgtgtgagccagttcagcttcaggc
atcagtcctcatagagtctaacatctgccatttgagccagaatctctcaa
tggccaggagctcaccaattggttctcaaccttcttaatactgtgacact
ttagtacagcttgtgttatggtgattcccaaccataaaattattttcatt
gctacttcataactgtaattttgctaccattacaattcctaatgtaaata
tctgtgttttccattggtcttacgtgacccctgtgaaagggttttttgac
acatatcccacaggttgagaaccactgctctagtctcagtctctcccgca
ctgggatcacaagtgcgcatcagcatccccagcttttcatggcagtgctg
gaacaataatgtagctgaattttgctacttagtaggttttcttctaccat
ttcccatccccttttttccctaccatttcaacaccctaacactagataag
agacagagaaagagacaaagagagacagagactcacagagagaagagaaa
ggcacacagagagaaagagagacagaaagagagacagaggggggttgaaa
ggtgggtggtgtttttcatttagactactaaccgctggttagtggtactg
agttccttggggcaaattttgaatcttcctccatcaggaatgtcta
gaattcactttgtagaccaggctggccttgaactcagaaatccgcctgcc
tctgcctcccaagggctgggattaaaggcgtgcgccaccacgctcggcta
cagcctgatcttatggagacattttctccatcgaggcttcctctgctgcg
atgactcttcctgtgtcaagttgacacaaaactagtatatagacagagca
ccatctcctgttctgctcaggatgtctctatgacatcaactgagtatgca
tcttgaagttcgtcttctgtctttctgttccctgcatgtggcatgggggc
cacacttctctgcccacttgtggagcaagttttgttgtgcccgaggactt
gagccactaatccttttggaaggaatatcaccataggatcttcaagcttg
ttacagtgtgcctgggtggggacagcacccacagtctgctcctagagtca
tcaggccaaagagagcgcaagttggggtctgggaggctctccagggtctt
ccaaagcagaggtgggacacaagacaggtacaggacacttggggaatggg
atagtggcctcagaggaaggctgctggccttaaaacctgcctcagctggc
cctgagatcctagcagcagcagcagcagcagcatcatgagtcttcctcag
agagcagaaagaagtatgtgcttttgtgcatgcttttgtgtgtgtgtgtg
tgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_140432132_140432834
seq2: B6Ng01-193K17.g_61_763

seq1  GAATTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAATCCGCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAATCCGCCTGCC  50

seq1  TCTGCCTCCCAAGGGCTGGGATTAAAGGCGTGCGCCACCACGCTCGGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCAAGGGCTGGGATTAAAGGCGTGCGCCACCACGCTCGGCTA  100

seq1  CAGCCTGATCTTATGGAGACATTTTCTCCATCGAGGCTTCCTCTGCTGCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGATCTTATGGAGACATTTTCTCCATCGAGGCTTCCTCTGCTGCG  150

seq1  ATGACTCTTCCTGTGTCAAGTTGACACAAAACTAGTATATAGACAGAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTCTTCCTGTGTCAAGTTGACACAAAACTAGTATATAGACAGAGCA  200

seq1  CCATCTCCTGTTCTGCTCAGGATGTCTCTATGACATCAACTGAGTATGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCCTGTTCTGCTCAGGATGTCTCTATGACATCAACTGAGTATGCA  250

seq1  TCTTGAAGTTCGTCTTCTGTCTTTCTGTTCCCTGCATGTGGCATGGGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAAGTTCGTCTTCTGTCTTTCTGTTCCCTGCATGTGGCATGGGGGC  300

seq1  CACACTTCTCTGCCCACTTGTGGAGCAAGTTTTGTTGTGCCCGAGGACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTCTCTGCCCACTTGTGGAGCAAGTTTTGTTGTGCCCGAGGACTT  350

seq1  GAGCCACTAATCCTTTTGGAAGGAATATCACCATAGGATCTTCAAGCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCACTAATCCTTTTGGAAGGAATATCACCATAGGATCTTCAAGCTTG  400

seq1  TTACAGTGTGCCTGGGTGGGGACAGCACCCACAGTCTGCTCCTAGAGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTGTGCCTGGGTGGGGACAGCACCCACAGTCTGCTCCTAGAGTCA  450

seq1  TCAGGCCAAAGAGAGCGCAAGTTGGGGTCTGGGAGGCTCTCCAGGGTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCCAAAGAGAGCGCAAGTTGGGGTCTGGGAGGCTCTCCAGGGTCTT  500

seq1  CCAAAGCAGAGGTGGGACACAAGACAGGTACAGGACACTTGGGGAATGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGCAGAGGTGGGACACAAGACAGGTACAGGACACTTGGGGAATGGG  550

seq1  ATAGTGGCCTCAGAGGAAGGCTGCTGGCCTTAAAACCTGCCTCAGCTGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGGCCTCAGAGGAAGGCTGCTGGCCTTAAAACCTGCCTCAGCTGGC  600

seq1  CCTGAGATCCTAGCAGCAGCAGCAGCAGCAGCATCATGAGTCTTCCTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGATCCTAGCAGCAGCAGCAGCAGCAGCATCATGAGTCTTCCTCAG  650

seq1  AGAGCAGAAAGAAGTATGTGCTTTTGTGCATGCTTTTGTGTGTGTGTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGAAAGAAGTATGTGCTTTTGTGCATGCTTTTGTGTGTGTGTGTG  700

seq1  TGT  703
      |||
seq2  TGT  703