BAC Information

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BAC

Clone NameB6Ng01-195D07
Chromosome5 (Build37)
Map Location 18,429,654 - 18,430,736
singlet/doubletsinglet
Overlap genenone
Upstream geneGnat3, Gnai1, LOC100041818, LOC668167
Downstream gene4921504A21Rik, Magi2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195D07.bB6Ng01-195D07.g
ACCGA017689GA017690
length1,092961
definitionB6Ng01-195D07.b B6Ng01-195D07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattctgtagtcaatttaaattttctaaagaattatacatttgtg
attccagaatgttctgccctttctctttatcatttaatagagtctgtacc
tcaatacccatgaatagtttaaatgttttactcattagtttttgtggccc
ataagataagaaaaatagcttatagttttctagactggtgctattgtttc
tcttgctggcaccaccctataaactgtggaaggaaacttaagcagaggtt
gtcaaatgtggatttacttcatttgagaagcattaaaaatttataatggc
ctgggtatctgagaaatatggccttatgtgtgtttatggatatcaagtta
ttcttctctgcagagagtgatgagcacaactgagttaagtcatactcatg
ggctgcataaaaaaatagagatttatttctcatactctctataaggaggc
actaacaatccttgctctgtcaaagacttcatcccaaacccactctaagt
gtctccttgtagaactgtggttttcacttcaatgtaaatatttacaaata
aatacaattggaaaagggtaattttcttgtttattttgatgaaatactaa
tgagggattctttgactcactttgtattctctcatattttcctttataaa
aatattagtagttaaccgtgaagctcttccttgacccagggtaagacttt
tagtgacattttgtgatgtaaaaactgtaagtacggttgccagccagtgg
tggcgcactaatcccagtacttgggaggcagaggcagaggcaggtggatt
tctgagttcgagccagcctggtttacaaagtgagttccaggacagccagg
gctacacagagaaaccctctcttgaaacaaaacaaaacaaaacaaaactg
taagtactacaatgaaaatgtctatttcatggtaagtatatattacttaa
atattatgtactattttcaatagtaaatatattattatatatgtttaact
actataacattcaaatggaattctttaaaatgctcccatttcctgatcaa
tttaaatcagtatttaaaacgttctgcctgagtacctatagc

gaattctctgtttaaaattctcaatttttgattgggttgtatgttttttg
gtggttagcttcttgatttctttatatattttgtatattagccctctata
agatgtgtcatttagtgaagatattttccccaatctgtaagttgcagatt
tctccccttggccatgtccttggccttacagaagctttgagtgggggaca
gaactaaaacttggaaggccagcagaaagaatggaaataggcaacctcag
gagataggaggtggggaaaccctctagaatgtgacagagacatgggagat
aagagactctaagaactcaaagggagggaccttagatgaaatgccctaca
gtggggagaggaacttgtagagcccacctccagtaaaaagacagggcatc
aagtgaaggaatggggtttccattcaacagtcaaggactctgacccagaa
tttttcctgtctgaaagaactggagggacaaaatggagaagagcatgaac
aaaaggaagtccagtgacaggcccaaattggtatccatctaaaggggggg
gggcaaggcctgccagtattggtgatactatgctgtgcttacaaacaggg
gcctatcatgcctcccctccaaaagacctaataagcagctgaaagagtca
gatgcagatatttacacccaaccaatagacagaagctgctgacccctgtg
attgaattagggaaaagctggatgaagctgaggaggagggcaatcctata
tcaagaccagcagtcgcaactaacctggaccccagagatctctcagacac
tgagccaccaaccaggcagaatataccagcttgataggaggctcctcaac
attatacagtagaggactgctggtcctggactcagtcagagagatgcacc
taaccctcaagagacttgaggctccaagggagtggggaaggttctgggtg
gtggtggggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_18429654_18430736
seq2: B6Ng01-195D07.b_41_1132 (reverse)

seq1  GCTATA-GTACTCA-GCAG-ACGTTTTAAATACTGATTTAAA-TGATCA-  45
      |||||| ||||||| |||| |||||||||||||||||||||| |||||| 
seq2  GCTATAGGTACTCAGGCAGAACGTTTTAAATACTGATTTAAATTGATCAG  50

seq1  GAAATGGGAGCATTTTTAAAGATCCCATTTGAATGTTAATAGTAGTTAAA  95
      |||||||||||||||| ||  || ||||||||||||| ||||||||||||
seq2  GAAATGGGAGCATTTTAAAGAATTCCATTTGAATGTT-ATAGTAGTTAAA  99

seq1  CATATATA--TATATATTTACTATTG-AAATAGTACAT-ATATTT-AGT-  139
      ||||||||   ||||||||||||||| ||||||||||| |||||| ||| 
seq2  CATATATAATAATATATTTACTATTGAAAATAGTACATAATATTTAAGTA  149

seq1  ATATATACTTACCATTGAAATAGACATTTTCATTGTAGTACTTACAGTTT  189
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATATATACTTACCA-TGAAATAGACATTTTCATTGTAGTACTTACAGTTT  198

seq1  TGTTTTGTTTTGTTTTGTTTCAAGAGAGGGTTTCTCTGTGTAGCCCTGGC  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTTTTGTTTTGTTTCAAGAGAGGGTTTCTCTGTGTAGCCCTGGC  248

seq1  TGTCCTGGAACTCACTTTGTAAACCAGGCTGGCTCGAACTCAGAAATCCA  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGGAACTCACTTTGTAAACCAGGCTGGCTCGAACTCAGAAATCCA  298

seq1  CCTGCCTCTGCCTCTGCCTCCCAAGTACTGGGATTAGTGCGCCACCACTG  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTCTGCCTCTGCCTCCCAAGTACTGGGATTAGTGCGCCACCACTG  348

seq1  GCTGGCAACCGTACTTACAGTTTTTACATCACAAAATGTCACTAAAAGTC  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCAACCGTACTTACAGTTTTTACATCACAAAATGTCACTAAAAGTC  398

seq1  TTACCCTGGGTCAAGGAAGAGCTTCACGGTTAACTACTAATATTTTTATA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCTGGGTCAAGGAAGAGCTTCACGGTTAACTACTAATATTTTTATA  448

seq1  AAGGAAAATATGAGAGAATACAAAGTGAGTCAAAGAATCCCTCATTAGTA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAATATGAGAGAATACAAAGTGAGTCAAAGAATCCCTCATTAGTA  498

seq1  TTTCATCAAAATAAACAAGAAAATTACCCTTTTCCAATTGTATTTATTTG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCAAAATAAACAAGAAAATTACCCTTTTCCAATTGTATTTATTTG  548

seq1  TAAATATTTACATTGAAGTGAAAACCACAGTTCTACAAGGAGACACTTAG  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTTACATTGAAGTGAAAACCACAGTTCTACAAGGAGACACTTAG  598

seq1  AGTGGGTTTGGGATGAAGTCTTTGACAGAGCAAGGATTGTTAGTGCCTCC  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTTTGGGATGAAGTCTTTGACAGAGCAAGGATTGTTAGTGCCTCC  648

seq1  TTATAGAGAGTATGAGAAATAAATCTCTATTTTTTTATGCAGCCCATGAG  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGAGAGTATGAGAAATAAATCTCTATTTTTTTATGCAGCCCATGAG  698

seq1  TATGACTTAACTCAGTTGTGCTCATCACTCTCTGCAGAGAAGAATAACTT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTTAACTCAGTTGTGCTCATCACTCTCTGCAGAGAAGAATAACTT  748

seq1  GATATCCATAAACACACATAAGGCCATATTTCTCAGATACCCAGGCCATT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCCATAAACACACATAAGGCCATATTTCTCAGATACCCAGGCCATT  798

seq1  ATAAATTTTTAATGCTTCTCAAATGAAGTAAATCCACATTTGACAACCTC  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTTTTAATGCTTCTCAAATGAAGTAAATCCACATTTGACAACCTC  848

seq1  TGCTTAAGTTTCCTTCCACAGTTTATAGGGTGGTGCCAGCAAGAGAAACA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAAGTTTCCTTCCACAGTTTATAGGGTGGTGCCAGCAAGAGAAACA  898

seq1  ATAGCACCAGTCTAGAAAACTATAAGCTATTTTTCTTATCTTATGGGCCA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCACCAGTCTAGAAAACTATAAGCTATTTTTCTTATCTTATGGGCCA  948

seq1  CAAAAACTAATGAGTAAAACATTTAAACTATTCATGGGTATTGAGGTACA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACTAATGAGTAAAACATTTAAACTATTCATGGGTATTGAGGTACA  998

seq1  GACTCTATTAAATGATAAAGAGAAAGGGCAGAACATTCTGGAATCACAAA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTATTAAATGATAAAGAGAAAGGGCAGAACATTCTGGAATCACAAA  1048

seq1  TGTATAATTCTTTAGAAAATTTAAATTGACTACAGAATGAATTC  1083
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAATTCTTTAGAAAATTTAAATTGACTACAGAATGAATTC  1092


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