BAC Information

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BAC

Clone NameB6Ng01-201B09
Chromosome5 (Build37)
Map Location 128,572,176 - 128,573,291
singlet/doubletsinglet
Overlap geneTmem132d
Upstream geneTmem132c, Slc15a4, Glt1d1
Downstream geneFzd10, LOC100040398, Piwil1, Rimbp2, Stx2, Ran, LOC100040441
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201B09.bB6Ng01-201B09.g
ACCGA021958GA021959
length8681,115
definitionB6Ng01-201B09.b B6Ng01-201B09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagaggcatgcctggcatcagtgttgagaggtggcccaatcctgt
gtttatcaacaccacgatcacctgaaagcgtggttttgaggcagagaaat
cttgaatgatacattagcatagtcagctgtacattgctgtgataaaacat
caggaccaagagcaacctggggagaaaaggatcatttcagcttacagtcc
attaaccagggaagttaaggcaggaatctggaggcatgaactgatgcaga
ggtccaggaggagtgttgcttactggattgcttctcatggcttgttcaaa
cggctttcttatagcacccaggaccactggcctagggttggcactgccca
cagtgggctgggcatgctcatatcaatcaccaaccaggaaaatgtcccac
agatttgtctaccggccattctgatggagacattttgccaactgagagtc
tgagtcaaattctgtgtgttcatatatgtctatagatcaaaatgtatgtg
tatgttcatgtatgtcagatgcatgtacacatgtgtatgagtagaggtca
gaggtacctctaagtatcatttctcagggccccattaccatatcttttaa
agtatatccatgagtgtttcctgcatgcatgtatgtatgggtacctccaa
aggccaaaagagggtgtcagatcatcaggaactggggttatagatagtag
ttagccaccaggtgggtgctagaaatcaaacttgggtcctagcagcaagt
gatatctgagccatctttccctctccttctccccctacccccctctcccc
ctccccctctccccatctccccctccctcccctgacagttcttccttatc
ggtctcgcccctcaatct

gtttcatttacatggagcctggacatgagggcagggagcctgcatggata
agaaccactgacctcttgatgagcacgactaattggaattttcaatgaat
gcttatgattctctgatcttgtgacattcgaaatcagtgacaaattaagt
ccctcgtcatctgagatgtgaactgcactttactgaagttgaaacacttg
aaaattggttttacaaatgccatctcatccgaacgctcagccgcggtatg
tcacttcagataggtatgaatgtgaaaaccaagtggctttgtatggaggc
agacgtgtttgtttcctgccaaaacagccgcgtcaacactcgagtggtgc
tgatggggaactctggtacagggctggggctaagaggggctggcgctcca
tggctagacaggaggattttggatgactgacagagccctgtggaaaggca
tgcttccctggggaaaccctccctgaagatatctctatttctctacgcct
taactctaactaggcttgtgcgggccagtgcatatgcacaggatctattc
caagctcacattgctctgcgtcgatcagtgctcagtcgcttctgctctca
ctcatgcactcagcacttctgccttacacctcctgcgcctgtgtgcgagc
atctctaatacctgcacaggaattctctctctccataggcttattctgta
tttgttagctacagcctttccacagaattcaacctgtctaagaggctttc
ctccactttcccctctcctctctgctgcatttctgggcaagtcagaagca
gtgtgatgttcacacctcatctttaatcatatctaagcattaattccttc
tgcttggggaaagaaacagttgtcatatacaagaaagaataatacgtgaa
aatccaaaatatctaattttcttatgtggacagtgatttcgggtgtcact
tattgagctctcgatagtggctgggtattcctttcctagctaggcaaggc
ccccacagtttagaggactgtcctcattttctatttctacaggcacatgt
cattgagcaaatgaagaacataggctgaaacctgttcccttatggccagc
actctgtaggttctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_128572176_128573291
seq2: B6Ng01-201B09.g_74_1188

seq1  GTTTCATTTACATGGAGCCTGGACATGAGGGCAGGGAGCCTGCATGGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATTTACATGGAGCCTGGACATGAGGGCAGGGAGCCTGCATGGATA  50

seq1  AGAACCACTGACCTCTTGATGAGCACGACTAATTGGAATTTTCAATGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCACTGACCTCTTGATGAGCACGACTAATTGGAATTTTCAATGAAT  100

seq1  GCTTATGATTCTCTGATCTTGTGACATTCGAAATCAGTGACAAATTAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATGATTCTCTGATCTTGTGACATTCGAAATCAGTGACAAATTAAGT  150

seq1  CCCTCGTCATCTGAGATGTGAACTGCACTTTACTGAAGTTGAAACACTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCGTCATCTGAGATGTGAACTGCACTTTACTGAAGTTGAAACACTTG  200

seq1  AAAATTGGTTTTACAAATGCCATCTCATCCGAACGCTCAGCCGCGGTATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGGTTTTACAAATGCCATCTCATCCGAACGCTCAGCCGCGGTATG  250

seq1  TCACTTCAGATAGGTATGAATGTGAAAACCAAGTGGCTTTGTATGGAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCAGATAGGTATGAATGTGAAAACCAAGTGGCTTTGTATGGAGGC  300

seq1  AGACGTGTTTGTTTCCTGCCAAAACAGCCGCGTCAACACTCGAGTGGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGTGTTTGTTTCCTGCCAAAACAGCCGCGTCAACACTCGAGTGGTGC  350

seq1  TGATGGGGAACTCTGGTACAGGGCTGGGGCTAAGAGGGGCTGGCGCTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGGGAACTCTGGTACAGGGCTGGGGCTAAGAGGGGCTGGCGCTCCA  400

seq1  TGGCTAGACAGGAGGATTTTGGATGACTGACAGAGCCCTGTGGAAAGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAGACAGGAGGATTTTGGATGACTGACAGAGCCCTGTGGAAAGGCA  450

seq1  TGCTTCCCTGGGGAAACCCTCCCTGAAGATATCTCTATTTCTCTACGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCCTGGGGAAACCCTCCCTGAAGATATCTCTATTTCTCTACGCCT  500

seq1  TAACTCTAACTAGGCTTGTGCGGGCCAGTGCATATGCACAGGATCTATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCTAACTAGGCTTGTGCGGGCCAGTGCATATGCACAGGATCTATTC  550

seq1  CAAGCTCACATTGCTCTGCGTCGATCAGTGCTCAGTCGCTTCTGCTCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTCACATTGCTCTGCGTCGATCAGTGCTCAGTCGCTTCTGCTCTCA  600

seq1  CTCATGCACTCAGCACTTCTGCCTTACACCTCCTGCGCCTGTGTGCGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGCACTCAGCACTTCTGCCTTACACCTCCTGCGCCTGTGTGCGAGC  650

seq1  ATCTCTAATACCTGCACAGGAATTCTCTCTCTCCATAGGCTTATTCTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTAATACCTGCACAGGAATTCTCTCTCTCCATAGGCTTATTCTGTA  700

seq1  TTTGTTAGCTACAGCCTTTCCACAGAATTCAACCTGTCTAAGAGGCTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTAGCTACAGCCTTTCCACAGAATTCAACCTGTCTAAGAGGCTTTC  750

seq1  CTCCACTTTCCCCTCTCCTCTCTGCTGCATTTCTGGGCAAGTCAGAAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTTTCCCCTCTCCTCTCTGCTGCATTTCTGGGCAAGTCAGAAGCA  800

seq1  GTGTGATGTTCACACCTCATCTTTAATCATATCTAAGCATTAATTCCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGATGTTCACACCTCATCTTTAATCATATCTAAGCATTAATTCCTTC  850

seq1  TGCTTGGGGAAAGAAACAGTTGTCATATACAAGAAAGAATAATACGTGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGGGGAAAGAAACAGTTGTCATATACAAGAAAGAATAATACGTGAA  900

seq1  AATCCAAAATATCTAA-TTTCTTATGT-GACAGTGATTTCGGGTGTCACT  948
      |||||||||||||||| |||||||||| ||||||||||||||||||||||
seq2  AATCCAAAATATCTAATTTTCTTATGTGGACAGTGATTTCGGGTGTCACT  950

seq1  TATTGAGCTCTCGATAAGTGGCTGGGTA-TCCTTTCCTAGCTAGGCAAGG  997
      ||||||||||||||| |||||||||||| |||||||||||||||||||||
seq2  TATTGAGCTCTCGAT-AGTGGCTGGGTATTCCTTTCCTAGCTAGGCAAGG  999

seq1  -CCCCACAGTTTAGAGGACTGTCCTCA-TTTCTATTTCTACAGGGCAACA  1045
       |||||||||||||||||||||||||| ||||||||||||||||   |||
seq2  CCCCCACAGTTTAGAGGACTGTCCTCATTTTCTATTTCTACAGG--CACA  1047

seq1  TGTCCATTGAGCCAAATG-AGAACAATAGCCTGAAACCTGTTCCCCTTAT  1094
      ||| ||||||| |||||| ||||| |||| |||||||||||| |||||||
seq2  TGT-CATTGAG-CAAATGAAGAAC-ATAGGCTGAAACCTGTT-CCCTTAT  1093

seq1  GGGCAGCACTCTGTAGGTTCTG  1116
      || |||||||||||||||||||
seq2  GGCCAGCACTCTGTAGGTTCTG  1115


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