BAC Information

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BAC

Clone NameB6Ng01-202A15
Chromosome5 (Build37)
Map Location 148,819,831 - 148,820,805
singlet/doubletsinglet
Overlap geneC130038G02Rik
Upstream geneLnx2, Rpo1-3, Gsh1, Pdx1, Cdx2, EG231903, LOC622952, Flt3, Map1lc3-ps3, LOC384254, LOC100039805, Pan3, Flt1, LOC100039825, Pomp, Slc46a3
Downstream geneLOC100041819, Slc7a1, LOC100041842, Ubl3, 2210417A02Rik, LOC100041869, Katnal1, 8430423G03Rik, 1810059H22Rik, LOC667386, LOC100039964
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202A15.g
ACCGA022643
length643
definitionB6Ng01-202A15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcagaagcctggaggcagggagtcaagtagaggccatggag
cagggctgcttactggtttactcctcatggcttgctcaaactattccctt
acacaattcaaggactgcctgcataggggtggtgctgccaacagtgggct
gggcccttccacatcaatcaataatgaagaaaataccccacagaccttgc
ctatggaccagtctgactcccatccagggaaactcgaagaaggctttgcc
tgccacactggattttagtctgtagaaatcgggtatgaagacaaatgggt
gatgagtgtatgtaatgggcgagggttgtaagcacccaggagagcttgat
gtgtgtattcccccccccccaaaaaaaattcatggggttctggaggcgca
gcatgggatattcttggagagttaacgagcttgaatgtcaggtttggaag
tctgggctctctttgtcaggtaatctagagctttagggatgctgctgatg
tatccatcaagagtccgaagaggacagaaaagtggttttgagatgctact
tagtagcgagccaggttacacattcatgaccagaaagacctaatagaaac
agaggttggtagtctttcctcctcctcctcctcctccaccacc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_148819831_148820805
seq2: B6Ng01-202A15.g_68_710

seq1  GAATTCAAGGCAGAAGCCTGGAGGCAGGGAGTCAAGTAGAGGCCATGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCAGAAGCCTGGAGGCAGGGAGTCAAGTAGAGGCCATGGAG  50

seq1  CAGGGCTGCTTACTGGTTTACTCCTCATGGCTTGCTCAAACTATTCCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTGCTTACTGGTTTACTCCTCATGGCTTGCTCAAACTATTCCCTT  100

seq1  ACACAATTCAAGGACTGCCTGCATAGGGGTGGTGCTGCCAACAGTGGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATTCAAGGACTGCCTGCATAGGGGTGGTGCTGCCAACAGTGGGCT  150

seq1  GGGCCCTTCCACATCAATCAATAATGAAGAAAATACCCCACAGACCTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCTTCCACATCAATCAATAATGAAGAAAATACCCCACAGACCTTGC  200

seq1  CTATGGACCAGTCTGACTCCCATCCAGGGAAACTCGAAGAAGGCTTTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGACCAGTCTGACTCCCATCCAGGGAAACTCGAAGAAGGCTTTGCC  250

seq1  TGCCACACTGGATTTTAGTCTGTAGAAATCGGGTATGAAGACAAATGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACACTGGATTTTAGTCTGTAGAAATCGGGTATGAAGACAAATGGGT  300

seq1  GATGAGTGTATGTAATGGGCGAGGGTTGTAAGCACCCAGGAGAGCTTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGTGTATGTAATGGGCGAGGGTTGTAAGCACCCAGGAGAGCTTGAT  350

seq1  GTGTGTATTCCCCCCCCCCCAAAAAAAATTCATGGGGTTCTGGAGGCGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTATTCCCCCCCCCCCAAAAAAAATTCATGGGGTTCTGGAGGCGCA  400

seq1  GCATGGGATATTCTTGGAGAGTTAACGAGCTTGAATGTCAGGTTTGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGGATATTCTTGGAGAGTTAACGAGCTTGAATGTCAGGTTTGGAAG  450

seq1  TCTGGGCTCTCTTTGTCAGGTAATCTAGAGCTTTAGGGATGCTGCTGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGCTCTCTTTGTCAGGTAATCTAGAGCTTTAGGGATGCTGCTGATG  500

seq1  TATCCATCAAGAGTCCGAAGAGGACAGAAAAGTGGTTTTGAGATGCTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCATCAAGAGTCCGAAGAGGACAGAAAAGTGGTTTTGAGATGCTACT  550

seq1  TAGTAGCGAGCCAGGTTACACATTCATGACCAGAAAGACCTAATAGAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGCGAGCCAGGTTACACATTCATGACCAGAAAGACCTAATAGAAAC  600

seq1  AGAGGTTGGTAGTCTTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT  650
      ||||||||||||||||||||||||||||||||||||| || ||       
seq2  AGAGGTTGGTAGTCTTTCCTCCTCCTCCTCCTCCTCCACCACC-------  643

seq1  CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTCCTCCTTCTTCTCCT  700
                                                        
seq2  --------------------------------------------------  643

seq1  CCTCCTCCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC  750
                                                        
seq2  --------------------------------------------------  643

seq1  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  800
                                                        
seq2  --------------------------------------------------  643

seq1  CTTCTTCTTCTTTTTCCTCCTCCTCCTCATCCTCCTCCTTGTTTGTTTTC  850
                                                        
seq2  --------------------------------------------------  643

seq1  AAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTTTGTA  900
                                                        
seq2  --------------------------------------------------  643

seq1  GACCTGGCTGTCCTCGAACTCAGAAATCCACCTGCCTCTGCCCCCCAAGT  950
                                                        
seq2  --------------------------------------------------  643

seq1  GCTGGGATTAAAGGTGTGCACCACC  975
                               
seq2  -------------------------  643