MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-202C23
Chromosome	8 (Build37)	5 (Build37)
Map Location	78,069,547 - 78,069,911	50,136,983 - 50,138,154
singlet/doublet	singlet	singlet
Overlap gene	1700007B14Rik
Upstream gene	Isx, Hmgb2l1, Tom1, LOC100039134, Hmox1, Mcm5, Rasd2, LOC675507, LOC384845, LOC666211, LOC100039229
Downstream gene	LOC666036, LOC100039185, EG631594, LOC666226
Link	Open Mouse BAC browser

Click to get alignment info.

name	Isx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71597 MGI:1918847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hmgb2l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70823 MGI:1918073
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tom1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21968 MGI:1338026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039134 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039134
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins pseudo : _no_value

name	Hmox1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15368 MGI:96163
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mcm5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17218 MGI:103197
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rasd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75141 MGI:1922391
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 ESTs, 35 Proteins

name	LOC675507 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675507
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 10 Proteins pseudo : _no_value

name	LOC384845 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384845
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 Proteins pseudo : _no_value

name	LOC666211 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666211
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 75 ESTs, 9 Proteins pseudo : _no_value

name	LOC100039229 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039229
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 132 mRNAs, 3319 ESTs, 25 Proteins

name	1700007B14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71831 MGI:1919081
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 8 ESTs, 3 Proteins

name	LOC666036 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666036
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 702 ESTs, 15 Proteins pseudo : _no_value

name	LOC100039185 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	EG631594 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:631594 MGI:3645735
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 Proteins pseudo : _no_value

name	LOC666226 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666226
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins pseudo : _no_value

name	Isx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386977 GeneID:71597 MGI:1918847
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : intestine specific homeobox transcript_id : NM_027837.2

name	Hmgb2l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30794253 GeneID:70823 MGI:1918073
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : high mobility group box 2-like 1 transcript_id : NM_178017.1

name	Tom1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130120 GeneID:21968 MGI:1338026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : target of myb1 homolog (chicken) transcript_id : NM_011622.2

name	Hmox1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754211 GeneID:15368 MGI:96163
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heme oxygenase (decycling) 1 transcript_id : NM_010442.1

name	Mcm5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112293272 GeneID:17218 MGI:103197
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae) transcript_id : NM_008566.2

name	Rasd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149258925 GeneID:75141 MGI:1922391
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 ESTs, 35 Proteins product : RASD family, member 2 transcript_id : XM_204287.8

name	LOC100039229 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258935 GeneID:100039229
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 132 mRNAs, 3317 ESTs, 25 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 2 transcript_id : XM_001472534.1

name	LOC100039229 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258933 GeneID:100039229
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 132 mRNAs, 3317 ESTs, 25 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 1 transcript_id : XM_001472515.1

name	LOC100039229 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258937 GeneID:100039229
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 91 mRNAs, 1645 ESTs, 2 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 3 transcript_id : XM_001472559.1

name	1700007B14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383660 GeneID:71831 MGI:1919081
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 3 Proteins product : RIKEN cDNA 1700007B14 gene, transcript variant 1 transcript_id : XM_486134.4

name	1700007B14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149258941 GeneID:71831 MGI:1919081
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 3 Proteins product : RIKEN cDNA 1700007B14 gene, transcript variant 2 transcript_id : XM_899560.3

name	LOC100039185 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258928 GeneID:100039185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Ubtf protein transcript_id : XM_001472414.1

name	Isx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119964706 GeneID:71597 MGI:1918847
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 exception : mismatches in translation product : intestine specific homeobox protein_id : NP_082113.1

name	Hmgb2l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794254 CCDS:CCDS22422.1 GeneID:70823 MGI:1918073
definition	GO_component : GO:0000785 - chromatin [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : high mobility group box 2-like 1 protein_id : NP_821136.1

name	Tom1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755847 GeneID:21968 MGI:1338026
definition	GO_component : GO:0005829 - cytosol [Evidence ISS]; GO:0005769 - early endosome [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence ISS] [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0006897 - endocytosis [Evidence ISS]; GO:0016197 - endosome transport [Evidence ISS]; GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : target of myb1 homolog protein_id : NP_035752.1

name	Hmox1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754212 CCDS:CCDS22423.1 GeneID:15368 MGI:96163
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005792 - microsome [Evidence IEA] GO_function : GO:0004392 - heme oxygenase (decyclizing) activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006788 - heme oxidation [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IDA] codon_start : 1 note : heme oxygenase 1; hemoxygenase product : heme oxygenase (decycling) 1 protein_id : NP_034572.1

name	Mcm5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112293273 CCDS:CCDS22424.1 GeneID:17218 MGI:103197
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0008094 - DNA-dependent ATPase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0051301 - cell division [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : DNA replication licensing factor; mini chromosome maintenance deficient 5 product : minichromosome maintenance deficient 5, cell division cycle 46 protein_id : NP_032592.2

name	Rasd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149258926 GeneID:75141 MGI:1922391
definition	codon_start : 1 product : RASD family, member 2 protein_id : XP_204287.7

name	LOC100039229 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258938 GeneID:100039229
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 3 protein_id : XP_001472609.1

name	LOC100039229 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258934 GeneID:100039229
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 1 protein_id : XP_001472565.1

name	LOC100039229 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258936 GeneID:100039229
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 2 protein_id : XP_001472584.1

name	1700007B14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63578696 GeneID:71831 MGI:1919081
definition	codon_start : 1 product : hypothetical protein LOC71831 isoform 1 protein_id : XP_486134.2

name	1700007B14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82917948 GeneID:71831 MGI:1919081
definition	codon_start : 1 product : hypothetical protein LOC71831 isoform 2 protein_id : XP_904653.1

name	LOC100039185 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258929 GeneID:100039185
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472464.1

name	LOC384845 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384845
definition	number : 1 pseudo : _no_value

name	EG631594 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:631594
definition	number : 1 pseudo : _no_value

name	LOC100039134 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258924 GeneID:100039134
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins product : similar to RIKEN cDNA 2810410M20 gene pseudo : _no_value transcript_id : XR_030686.1

name	LOC675507 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258927 GeneID:675507
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 10 Proteins product : similar to Ribosomal protein L3 pseudo : _no_value transcript_id : XR_030679.1

name	LOC666211 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258932 GeneID:666211
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 75 ESTs, 9 Proteins product : similar to Nat5-prov protein pseudo : _no_value transcript_id : XR_030724.1

name	LOC666036 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258942 GeneID:666036
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 702 ESTs, 15 Proteins product : similar to 3-phosphoglycerate dehydrogenase pseudo : _no_value transcript_id : XR_030810.1

name	LOC666226 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258943 GeneID:666226
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins product : similar to ribosomal protein L13 pseudo : _no_value transcript_id : XR_030829.1

clone name	MSMg01-441J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331P04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-360B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060B18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-418J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421P01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-437M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267J18
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-202C23.b	B6Ng01-202C23.g
ACC	GA022750	GA022751
length	931	1,155
definition	B6Ng01-202C23.b	B6Ng01-202C23.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(78,069,547 - 78,069,911)	(50,136,983 - 50,138,154)
sequence	gaattctcaggtttggcctcaagaaggcccagacttcttcaaagttctat tcatgctctgtaattacattccttttgtgtgtgtatattatcttgccttt atcctccatacctgacatccattcctctgcatgcttttgtcttttaatgg taatgtccgctattgttttatttcatccatcagctccttcatgtcaacta ttttcgtttgttttgtcaatgtttcagtctccctgctagatttccccact attttttgatgtttaccttaacagtttgtcttctctgggtcttacatatg ttttcttaattcatgaatctatttgtttgagtctgctatataatcactaa tttttaaaaagacagttctttctcaggaattacacctattatttatgggg ctttggattccatttgagaggaattggtaagtgagggatggatcatggat gacagttatataatattctttttttaatgttattttttattagatatttt cttcatttatatttcaaatgctatcccctctcctagtttcctctctgaag gtcctctttacccttcccctaccctgctccccaagccattcattccctca ttctggccctggcatttctctgtactggggcatatacacttcacaaaacc aagggcctctcctcccattgatggcctactaggccatcctctgctacata tgcaactagagacacaagctatgtgggaggggggtactggttagttcata tggttgttccctcctatagggttgcagactactttagctcctttgggtac tttctctagctcttcattgggggccctgcgttccatacataaatgactgt gagcattcacttctgtatttgccaggcactggcatagcctacaagagata gctatatcagggttcctgtcagcaaaatctt	gaattccatactcatgtaatctgtatttacaaattcaagcaaacacagat caaaatatctggcagaaaaacactgcatctgtttagactgttgttgacat aaatgatattgtcctaacactgtttagatagcattttcaatatattcttg gtataagaaatatagagagagtttatgtgtatgtattttttttaaatttc attcagaggaaatgatttcatcgatgaatttttaaagcctaaggtagttg tagaagccatcaccattagtgacccatgaatgcctctagttgagtcatca cagatcaactttctcaaagtgcccctcattttttttccacatttgcttct taactaagtttagaaagtctagactatttcatcaagctacatcatccctg aactaggacaactaatcagtttgtgtctctttcattgttgctactttggt ttgtttcagaagtgcatggagatgctttagggtcccacaaaaacaacaag tagctatatatgttgacaacagatctgttattgacagctagtgctcgctc cacccactcactcctagtccactagtccttctgtgaaaaaataaggaaaa ttacatttgtcatataattaagttcaatggactaaaaattataagattta actagagagtgttttaatgtcttgccttagttttattagccatatggttt ttacccatctttcctttgtttcccgtgtctatgcttatgagctgcttgat aacagtttggaattttacaattgaataaaccttaatttgagcaggaattc ctattagcatctgatattcattcacagagtccagtgttcactatttggct attcccttaatgtacagagtggataatgtagtatgaaacctgcaattaca aaaatccagatgacactatattaaaaactcagtctattattactgtagaa gctgcatatggcaatctggccactcaaggcttatgattagctttaaagca tatagaaaacatagccgaaaggtacattcacatgtttgaagagctcacag ccttcctatcaccttttctgtagaacaatttgtcatagcagaaggtggcc tgcaatcaagaaggaatctcatactagtctggtctctcgagatcaccgcc ctgta
quality values	Open. Hide. 58 33 33 25 58 51 54 32 22 58 54 54 58 58 58 31 28 58 58 41 27 42 58 62 62 62 47 39 62 45 41 62 47 43 56 30 46 47 56 28 32 56 56 62 62 62 62 62 62 62 62 47 54 62 62 62 62 62 62 62 54 62 62 62 59 62 62 59 62 62 62 49 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 59 59 62 62 62 62 62 59 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 54 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 46 62 49 62 52 62 54 62 62 62 62 54 62 62 54 62 62 62 62 52 62 62 62 62 62 62 43 62 62 62 54 62 54 52 54 58 58 54 58 54 58 58 52 52 52 58 58 58 58 58 52 49 52 54 49 54 54 54 58 58 58 44 54 54 46 58 58 54 52 44 42 54 35 58 42 47 54 54 51 49 54 54 54 34 36 48 52 54 58 52 54 32 58 48 32 47 52 46 34 38 50 24 58 41 41 42 52 52 58 54 54 50 52 37 52 33 39 50 54 52 41 42 48 42 54 50 52 54 54 54 41 45 52 52 54 34 58 48 54 51 54 52 54 54 51 36 36 32 13 58 58 58 58 58 31 40 38 46 58 58 50 40 50 39 45 53 33 34 50 33 37 48 44 27 34 42 33 27 14 58 15 40 19 58 32 34 46 47 44 58 52 23 50 36 37 32 6 50 21 24 27 37 24 32 21 34 37 35 50 31 42 48 51 43 50 42 50 32 42 26 24 26 25 28 37 50 30 39 21 28 30 23 10 14 27 29 24 31 33 43 50 50 28 7 13 9 7 9 13 14 9 22 37 7 6 4 5 4 8 24 42 58 26 17 34 34 19 42 58 29 32 53 18 37 29 35 31 39 28 18 17 29 32 28 33 33 33 32 51 28 25 32 19 19 6 15 26 39 20 15 9 20 13 9 14 36 22 25 18 44 15 23 49 35 11 49 10 28 15 42 33 24 42 31 31 23 26 18 12 9 44 28 10 15 14 22 31 33 21 31 22 9 16 25 40 53 14 14 31 39 40	Open. Hide. 62 47 39 42 62 62 44 29 62 62 62 62 44 36 45 38 22 27 28 33 46 56 62 56 56 62 62 59 62 62 49 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 54 54 62 62 56 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 59 59 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 54 54 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 52 62 62 62 62 62 62 62 62 58 58 46 54 54 54 58 58 58 58 58 58 58 58 58 54 58 58 58 54 58 58 58 58 58 58 58 52 58 58 54 58 58 58 58 58 58 58 54 58 58 54 58 58 58 58 58 58 58 54 52 58 58 54 54 58 58 58 58 58 53 58 54 54 58 58 58 54 46 58 58 58 54 58 58 58 58 58 58 53 58 58 58 58 46 49 58 49 53 58 58 58 52 58 58 58 58 53 58 52 58 54 54 50 41 49 51 49 54 50 58 50 58 53 58 58 51 58 58 58 58 58 58 41 49 52 54 41 54 49 58 58 41 33 58 49 58 50 53 58 58 58 52 47 52 51 51 51 50 51 53 41 41 58 49 51 53 52 41 58 44 58 51 47 49 53 53 58 58 58 50 50 52 53 50 52 58 50 38 19 58 49 31 52 51 49 37 50 53 50 52 47 37 54 29 54 54 45 39 53 51 54 35 53 52 40 54 44 44 44 52 53 25 52 54 54 45 42 35 31 35 33 41 53 39 52 50 42 54 54 18 54 54 54 40 40 33 54 54 34 52 52 40 54 46 37 51 32 36 36 53 39 54 41 37 54 54 39 29 54 37 52 37 52 40 52 45 31 52 53 36 45 53 22 52 32 45 39 37 32 45 34 29 32 32 45 35 45 53 52 31 38 21 36 53 36 53 53 34 31 34 19 47 33 33 52 53 35 31 19 51 31 31 37 31 30 32 26 31 51 41 30 42 29 32 19 6 24 30 32 30 42 36 35 31 31 26 31 37 26 30 31 31 31 31 31 41 24 31 30 42 36 32 32 43 29 19 27 18 31 42 32 31 31 30 31 34 38 46 30 31 30 25 31 34 37 26 48 42 31 43 35 31 31 32 31 32 46 37 32 31 30 33 31 41 24 32 32 32 31 28 25 31 28 27 11 12 31 29 31 42 24 30 35 33 32 22 30 35 48 32 21 27 21 38 26 23 20 22 27 25 31 32 48 48 44 24 31 22 32 24 20 37 18 31 29 5 14 31 32 33 27 20 21 25 26 48 44 43 18 23 32 32 32 31 32 32 25 31 22 26 30 17 21 33 33 31 34 17 34 28 32 26 24 32 34 32 32 19 26 18 30 16 26 11 16 21 19 23 31 32 18 19 10 11 17 32 25 12 16 21 18 17 27 11 16 13 19 32 14 16 28 15 24 27 47 21 13 31 20 19 28 20 26 16 27 14 16 25 47 47 17 24 20 28 19 14 25 16 9 14 30 19 12 14 20 24 10 11 5 11 3 6 14 10 24 17 13 47 23 7 12 15 7 21 8 19 24 6 6 6 4 6 13 14 17 7 13 14 7 7 6 6 10 9 17 15 28 28 12 9 5 16 6 6 6 18 7 8 6 15 7 7 13 16 16 18 6 6 11 5 7 15 7 12 15 5 17 3 5 16 5 6 20 20 21 4 3 5 14 5 6 3 3 3 4 5 6 17 4 5 4 7 8 13 6 12 10 22 5 4 6 8 4 2 1 4 14 5 5 2 1 2 3 3 4 4 5 22 6 5 7 29 9 5 6 3 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr8_78069547_78069911
seq2: B6Ng01-202C23.b_529_876 (reverse)

seq1  GAACACAGGG-CCCCAATGAAGGAGCTAGAGAAAGTACCC-AAGGAACTA  48
      |||| ||||| |||||||||| |||||||||||||||||| ||||| |||
seq2  GAACGCAGGGCCCCCAATGAA-GAGCTAGAGAAAGTACCCAAAGGAGCTA  49

seq1  AAGTA-------------------TGAACAACAATATGAACTAATCAGTA  79
      |||||                    ||||||| ||||||||||| |||||
seq2  AAGTAGTCTGCAACCCTATAGGAGGGAACAACCATATGAACTAACCAGTA  99

seq1  TCCTTCCCCCCCCCCCCCCACCGAGC-TGTGTCTCTAGTTGCATATGTAG  128
               |||||| |||||  ||| |||||||||||||||||||||||
seq2  ---------CCCCCCTCCCACATAGCTTGTGTCTCTAGTTGCATATGTAG  140

seq1  CAGAGGATGGCCTAGTTGGCCATCAATGGGTGGAGAGGCCCTTGGTTTTG  178
      |||||||||||||||| ||||||||||||| |||||||||||||||||||
seq2  CAGAGGATGGCCTAGTAGGCCATCAATGGGAGGAGAGGCCCTTGGTTTTG  190

seq1  TGAAGATCATATGCCCCAGTACAGGAGAATACCTCAGCCAGGAAGCGGGA  228
      |||||   ||||||||||||||||   ||| ||   ||||| | | ||||
seq2  TGAAGTGTATATGCCCCAGTACAGAGAAATGCCAGGGCCAGAATGAGGGA  240

seq1  GTGGGTGGGTTGGGGAGTAGGGCCAGGGGAGGGTATAGGGGATTTTGGGG  278
       ||  ||| |||||||| ||||   ||| |||||| || |||  ||    
seq2  ATGAATGGCTTGGGGAGCAGGGTAGGGGAAGGGTAAAGAGGACCTT----  286

seq1  ATAACATTTGAAATGTAAATGAACAAAATATCTAATTTTAAAAAAGAAGT  328
          ||   || | | || |                     |  ||| | 
seq2  ----CA---GAGAGGAAACT---------------------AGGAGAGGG  308

seq1  GAAAAAA---GAAATGTAAATGAAGAAAATATCTAATAAA  365
      || |  |   ||||| ||||||||||||||||||||||||
seq2  GATAGCATTTGAAATATAAATGAAGAAAATATCTAATAAA  348

seq1: chr5_50136983_50138154
seq2: B6Ng01-202C23.g_67_1221 (reverse)

seq1  TACAGGGCGGTGATACTCTGAGAAGACAAGACTTAGTAATGAGATTCTTT  50
      |||||||||||||| ||| ||| |||| |||| |||| ||||||||| ||
seq2  TACAGGGCGGTGAT-CTC-GAG-AGACCAGAC-TAGT-ATGAGATTCCTT  45

seq1  CCTTGGACTGCA-GCCACCCTCTTGCTTATGACAAAATTGTTTCTACAGA  99
      |  | || |||| |||||| || ||| |||||| |||||| |||||||||
seq2  C--TTGATTGCAGGCCACCTTC-TGC-TATGAC-AAATTG-TTCTACAGA  89

seq1  AAAGGTGATAGGAAGGGCTGTGAAGCTCTTTCAAACATGTGAAATTGTAC  149
      |||||||||||||| ||||||| ||||| ||||||||||||||  |||||
seq2  AAAGGTGATAGGAA-GGCTGTG-AGCTC-TTCAAACATGTGAA--TGTAC  134

seq1  CTTTCGGGCTATGTTTTCTATATGCTTTAAAGCTAATCATAAGCCTTGAG  199
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTC-GGCTATGTTTTCTATATGCTTTAAAGCTAATCATAAGCCTTGAG  183

seq1  TGGCCAGATTGCCATATGCAGCTTCTACAGTAATAATAGACTGAGTTTTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGATTGCCATATGCAGCTTCTACAGTAATAATAGACTGAGTTTTT  233

seq1  AATATAGTGTTCATCTGGATTTTTGTAATTGCAGGTTTCATACTACATTA  299
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGTG-TCATCTGGATTTTTGTAATTGCAGGTTTCATACTACATTA  282

seq1  TCCACTCTGTACATTAAGGGAATAGCCAAATAGTGAACACTGGACTCTGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTCTGTACATTAAGGGAATAGCCAAATAGTGAACACTGGACTCTGT  332

seq1  GAATGAATATCAGATGCTAATAGGAATTCCTGCTCAAATTAAGGTTTATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAATATCAGATGCTAATAGGAATTCCTGCTCAAATTAAGGTTTATT  382

seq1  CAATTGTAAAATTCCAAACTGTTATCAAGCAGCTCATAAGCATAGACACG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGTAAAATTCCAAACTGTTATCAAGCAGCTCATAAGCATAGACACG  432

seq1  GGAAACAAAGGAAAGATGGGTAAAAACCATATGGCTAATAAAACTAAGGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAAAGGAAAGATGGGTAAAAACCATATGGCTAATAAAACTAAGGC  482

seq1  AAGACATTAAAACACTCTCTAGTTAAATCTTATAATTTTTAGTCCATTGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATTAAAACACTCTCTAGTTAAATCTTATAATTTTTAGTCCATTGA  532

seq1  ACTTAATTATATGACAAATGTAATTTTCCTTATTTTTTCACAGAAGGACT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAATTATATGACAAATGTAATTTTCCTTATTTTTTCACAGAAGGACT  582

seq1  AGTGGACTAGGAGTGAGTGGGTGGAGCGAGCACTAGCTGTCAATAACAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGACTAGGAGTGAGTGGGTGGAGCGAGCACTAGCTGTCAATAACAGA  632

seq1  TCTGTTGTCAACATATATAGCTACTTGTTGTTTTTGTGGGACCCTAAAGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGTCAACATATATAGCTACTTGTTGTTTTTGTGGGACCCTAAAGC  682

seq1  ATCTCCATGCACTTCTGAAACAAACCAAAGTAGCAACAATGAAAGAGACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCATGCACTTCTGAAACAAACCAAAGTAGCAACAATGAAAGAGACA  732

seq1  CAAACTGATTAGTTGTCCTAGTTCAGGGATGATGTAGCTTGATGAAATAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGATTAGTTGTCCTAGTTCAGGGATGATGTAGCTTGATGAAATAG  782

seq1  TCTAGACTTTCTAAACTTAGTTAAGAAGCAAATGTGGAAAAAAAATGAGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGACTTTCTAAACTTAGTTAAGAAGCAAATGTGGAAAAAAAATGAGG  832

seq1  GGCACTTTGAGAAAGTTGATCTGTGATGACTCAACTAGAGGCATTCATGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTTTGAGAAAGTTGATCTGTGATGACTCAACTAGAGGCATTCATGG  882

seq1  GTCACTAATGGTGATGGCTTCTACAACTACCTTAGGCTTTAAAAATTCAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTAATGGTGATGGCTTCTACAACTACCTTAGGCTTTAAAAATTCAT  932

seq1  CGATGAAATCATTTCCTCTGAATGAAATTTAAAAAAAATACATACACATA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGAAATCATTTCCTCTGAATGAAATTTAAAAAAAATACATACACATA  982

seq1  AACTCTCTCTATATTTCTTATACCAAGAATATATTGAAAATGCTATCTAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCTCTATATTTCTTATACCAAGAATATATTGAAAATGCTATCTAA  1032

seq1  ACAGTGTTAGGACAATATCATTTATGTCAACAACAGTCTAAACAGATGCA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTTAGGACAATATCATTTATGTCAACAACAGTCTAAACAGATGCA  1082

seq1  GTGTTTTTCTGCCAGATATTTTGATCTGTGTTTGCTTGAATTTGTAAATA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTTCTGCCAGATATTTTGATCTGTGTTTGCTTGAATTTGTAAATA  1132

seq1  CAGATTACATGAGTATGGAATTC  1172
      |||||||||||||||||||||||
seq2  CAGATTACATGAGTATGGAATTC  1155

BAC Information

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BAC

BAC End Information

Alignment Information