MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-204N15
Chromosome	5 (Build37)
Map Location	119,259,422 - 119,423,486
singlet/doublet	doublet
Overlap gene	none
Upstream gene	Nos1, Fbxo21, Tesc, Fbxw8, Hrk, Tmem118, 2410131K14Rik, LOC665162, Thrap2
Downstream gene	LOC100039488, EG665194, LOC100039529, LOC100039542, Tbx3, EG433945, Tbx5
Link	Open Mouse BAC browser

Click to get alignment info.

name	Nos1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18125 MGI:97360
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fbxo21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231670 MGI:1924223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tesc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57816 MGI:1930803
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fbxw8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231672 MGI:1923041
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hrk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12123 MGI:1201608
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem118 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269695 MGI:2442859
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2410131K14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76792 MGI:1924042
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665162 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665162
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins pseudo : _no_value

name	Thrap2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76199 MGI:2670178
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039488 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039488
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	EG665194 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665194 MGI:3647618
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs

name	LOC100039529 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039529
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100039542 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039542
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Tbx3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21386 MGI:98495
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG433945 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433945 MGI:3648222
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Tbx5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21388 MGI:102541
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nos1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130618 GeneID:18125 MGI:97360
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nitric oxide synthase 1, neuronal transcript_id : NM_008712.2

name	Fbxo21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371789 GeneID:231670 MGI:1924223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box protein 21 transcript_id : NM_145564.3

name	Tesc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130497 GeneID:57816 MGI:1930803
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tescalcin transcript_id : NM_021344.3

name	Fbxw8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120407053 GeneID:231672 MGI:1923041
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box and WD-40 domain protein 8 transcript_id : NM_172721.2

name	Hrk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87299645 GeneID:12123 MGI:1201608
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : harakiri, BCL2 interacting protein (contains only BH3 domain) transcript_id : NM_007545.2

name	Tmem118 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381588 GeneID:269695 MGI:2442859
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 118 transcript_id : NM_172998.2

name	2410131K14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486988 GeneID:76792 MGI:1924042
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2410131K14 gene transcript_id : NM_001081236.1

name	Thrap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142359934 GeneID:76199 MGI:2670178
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thyroid hormone receptor associated protein 2 transcript_id : NM_172424.3

name	LOC100039488 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254544 GeneID:100039488
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to R10D12.10 transcript_id : XM_001472970.1

name	EG665194 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254546 GeneID:665194 MGI:3647618
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs product : predicted gene, EG665194 transcript_id : XM_975198.2

name	LOC100039542 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254547 GeneID:100039542
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100039542 transcript_id : XM_001473078.1

name	Tbx3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37622346 GeneID:21386 MGI:98495
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-box 3 transcript_id : NM_011535.2

name	Tbx3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38327622 GeneID:21386 MGI:98495
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-box 3 transcript_id : NM_198052.1

name	EG433945 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375585 GeneID:433945 MGI:3648222
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG433945 transcript_id : XM_975483.1

name	Tbx5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61098079 GeneID:21388 MGI:102541
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-box 5 transcript_id : NM_011537.2

name	Nos1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6724321 CCDS:CCDS19606.1 GeneID:18125 MGI:97360
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS]; GO:0045202 - synapse [Evidence IDA] GO_function : GO:0005516 - calmodulin binding [Evidence IEA]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0050660 - FAD binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0004517 - nitric-oxide synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006809 - nitric oxide biosynthesis [Evidence IEA]; GO:0006941 - striated muscle contraction [Evidence IMP] codon_start : 1 note : neuronal nitric oxide synthase product : nitric oxide synthase 1, neuronal protein_id : NP_032738.1

name	Fbxo21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704134 CCDS:CCDS19607.1 GeneID:231670 MGI:1924223
definition	GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : F-box only protein 21 protein_id : NP_663539.1

name	Tesc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981125 CCDS:CCDS19608.1 GeneID:57816 MGI:1930803
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] [Evidence ISS]; GO:0030027 - lamellipodium [Evidence ISS] [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0001726 - ruffle [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IDA] [Evidence IEA] [Evidence ISS]; GO:0000287 - magnesium ion binding [Evidence IDA]; GO:0019212 - phosphatase inhibitor activity [Evidence IDA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0006883 - sodium ion homeostasis [Evidence ISS] codon_start : 1 product : tescalcin protein_id : NP_067319.2

name	Fbxw8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120407054 CCDS:CCDS19609.1 GeneID:231672 MGI:1923041
definition	GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : F-box protein FBX29 protein_id : NP_766309.2

name	Hrk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671636 GeneID:12123 MGI:1201608
definition	GO_process : GO:0006915 - apoptosis [Evidence IEA] codon_start : 1 note : BH3 interacting (with BCL2 family) domain, apoptosis agonist product : harakiri protein_id : NP_031571.1

name	Tmem118 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370504 CCDS:CCDS19611.1 GeneID:269695 MGI:2442859
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC269695 protein_id : NP_766586.1

name	2410131K14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486989 GeneID:76792 MGI:1924042
definition	codon_start : 1 product : hypothetical protein LOC76792 protein_id : NP_001074705.1

name	Thrap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51100966 GeneID:76199 MGI:2670178
definition	GO_component : GO:0000119 - mediator complex [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006366 - transcription from RNA polymerase II promoter [Evidence IC] codon_start : 1 exception : unclassified translation discrepancy product : thyroid hormone receptor associated protein 2 protein_id : NP_766012.2

name	LOC100039488 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254545 GeneID:100039488
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473020.1

name	EG665194 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94375582 GeneID:665194 MGI:3647618
definition	codon_start : 1 product : hypothetical protein protein_id : XP_980292.1

name	LOC100039542 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254548 GeneID:100039542
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473128.1

name	Tbx3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37622347 CCDS:CCDS19613.1 GeneID:21386 MGI:98495
definition	GO_component : GO:0005634 - nucleus [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0048754 - branching morphogenesis of a tube [Evidence IMP]; GO:0007569 - cell aging [Evidence IDA]; GO:0007275 - development [Evidence IEA]; GO:0030879 - mammary gland development [Evidence IMP] [Evidence IGI]; GO:0016481 - negative regulation of transcription [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : T-box 3 protein isoform 1 protein_id : NP_035665.2

name	Tbx3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38327623 CCDS:CCDS19614.1 GeneID:21386 MGI:98495
definition	GO_component : GO:0005634 - nucleus [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0048754 - branching morphogenesis of a tube [Evidence IMP]; GO:0007569 - cell aging [Evidence IDA]; GO:0007275 - development [Evidence IEA]; GO:0030879 - mammary gland development [Evidence IMP] [Evidence IGI]; GO:0016481 - negative regulation of transcription [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : T-box 3 protein isoform 2 protein_id : NP_932169.1

name	EG433945 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94375586 GeneID:433945 MGI:3648222
definition	codon_start : 1 product : hypothetical protein protein_id : XP_980577.1

name	Tbx5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34098933 CCDS:CCDS19615.1 GeneID:21388 MGI:102541
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0030326 - embryonic limb morphogenesis [Evidence IGI] [Evidence IMP]; GO:0007507 - heart development [Evidence ISS] [Evidence IMP]; GO:0030324 - lung development [Evidence IMP]; GO:0002009 - morphogenesis of an epithelium [Evidence IMP]; GO:0007389 - pattern specification [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : T-box 5 protein_id : NP_035667.1

name	LOC100039529 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039529
definition	number : 1 pseudo : _no_value

name	LOC100039529 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039529
definition	number : 2 pseudo : _no_value

name	LOC100039529 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039529
definition	number : 3 pseudo : _no_value

name	LOC100039529 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039529
definition	number : 4 pseudo : _no_value

name	LOC665162 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254574 GeneID:665162
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins product : similar to Basic transcription factor 3 pseudo : _no_value transcript_id : XR_034094.1

clone name	MSMg01-510M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222A08
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-204N15.b	B6Ng01-204N15.g
ACC	GA024682	GA024683
length	833	86
definition	B6Ng01-204N15.b	B6Ng01-204N15.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(119,259,422 - 119,260,245)	(119,423,401 - 119,423,486)
sequence	gaattcagttctgtggaggacgcacaaactagccgttacgggttgtatca ctggggacaggctaatctttaaattcttatctccactatttcctagctgt gtgatttaggcagctgcttgagcctctctgagcctcagaacgtgaagatc ttgtgcctcgtaaacaagctgatactagcacaatacctaaggtagcgttt ggcccatagcagctgctcattaaatgtcagccattccttttgttgttgtt gcctagaaacccgaagaatgtggaaatccaaagctacatacagtagggac ctgtcccacctgtctgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg tgtctgcttccacttccataaaactgggatgggcttctttatggaaatgg ccaaccatttctccctttcattccataccagctataaaaccagatgactc atgttcaccacaataccagtttagcctgtctgacagctggaaaacaaacg ctattcaccagtgcctttacccttgactctgggcttcacgaagcgcctgg atagacagacatctcccagcagagagcctatattaactcaggttcagatc cctgctctactgctcaacaggggcaattggagtgagtgtcctgaccctct ctaagccttgcctggggatggatgggatccctctgaggatatcttgaagc cacattggcacgaaaggaaatctaacagtctctaccaggctgggcgtggt gacctcttgccttttaaactcgaaccttgagaggctgaggcaggttggat cttctaggagtttggaggccaacctgtggttcc	cagatgaaaatatctgctctacgaggttcatggaagaagggaggaggaga gaggagactagaggagagaggagtgggtagagggag
quality values	Open. Hide. 31 17 21 23 49 41 26 33 52 62 62 47 47 54 62 47 62 47 62 37 21 62 62 62 62 56 62 62 49 62 47 56 32 41 24 24 28 20 20 25 32 34 50 50 62 51 59 59 59 59 59 62 62 54 49 54 59 59 62 62 49 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 59 59 59 62 62 59 62 59 49 62 54 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 59 54 42 49 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 40 62 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 51 51 50 56 56 59 62 62 59 62 62 62 62 62 62 62 62 59 59 59 59 59 62 62 62 62 54 62 62 62 59 59 59 59 59 59 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 59 62 59 62 62 62 62 62 62 62 62 62 59 51 56 43 59 56 62 17 12 18 13 19 18 59 56 59 59 59 62 62 62 62 59 59 59 51 45 59 43 56 56 56 56 59 56 59 62 59 44 59 56 59 50 45 51 43 34 50 50 56 56 50 18 24 22 14 24 15 59 62 59 59 51 44 44 56 59 56 56 51 56 56 51 51 38 32 36 44 51 39 38 38 51 38 56 62 56 62 44 56 39 51 50 50 37 26 47 39 56 47 44 47 51 47 50 56 44 44 62 44 39 56 51 42 50 46 38 39 62 62 62 56 54 51 62 62 56 56 14 21 20 12 26 20 56 51 51 33 39 37 38 33 54 62 34 56 47 47 56 56 37 39 31 51 33 22 56 14 32 38 39 62 62 56 50 42 47 41 62 62 62 56 56 27 22 62 43 42 62 27 10 38 28 17 22 31 39 56 25 32 39 39 56 62 56 56 41 41 56 30 39 46 42 42 52 41 20 33 31 26 9 17 28 52 54 23 50 54 48 50 54 54 25 48 41 54 62 25 11 52 15 42 52 62 33 39 33 25 9 19 30 42 35 34 9 14 13 16 13 15 35 46 32 41 31 31 26 13 14 20 28 18 28 22 27 28 32 32 32 42 21 17 25 14 11 13 20 14 8 30 46 27 17 25 33 27 21 17 33 39 45 10 9 9 9 4 16 27 14 35 42 48 19 17 9 13 24 13 37 23 25 13 19 28 8 11 17 17 11 16 42 9 30 29 24 34 42 30 18 14 18 19 12 4 17 19 19 10 9 8 7 16 15 14 18 26 52 42 20 14 28 22 22 21 13 9 13 26 31 32 22 17 38 7 19 27 10 12 7 9 12 15 6 13 12 12 9 19 14 8 23 15 19 27 24 14 23 26 12 9 9 13 12 7 16 23 12 7 10 14 9 16 11 33 14 13 15 9 12 13 11 17 9 9 23 8 13	Open. Hide. 29 16 41 39 16 13 27 13 12 8 8 14 13 16 8 7 24 23 39 42 50 45 48 58 52 38 42 58 42 33 36 46 47 48 44 37 58 54 54 58 58 58 58 58 58 44 58 58 52 54 41 47 35 40 24 19 25 41 47 34 52 62 54 62 62 52 62 52 52 52 62 62 39 38 62 62 47 49 52 40 46 46 52 29 23 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_119259422_119260245
seq2: B6Ng01-204N15.b_47_879

seq1  GAATTCAGTTCTGTGGAGGACGCACAAACTAGCCGTTACGGGTTGTATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCTGTGGAGGACGCACAAACTAGCCGTTACGGGTTGTATCA  50

seq1  CTGGGGACAGGCTAATCTTTAAATTCTTATCTCCACTATTTCCTAGCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGACAGGCTAATCTTTAAATTCTTATCTCCACTATTTCCTAGCTGT  100

seq1  GTGATTTAGGCAGCTGCTTGAGCCTCTCTGAGCCTCAGAACGTGAAGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTAGGCAGCTGCTTGAGCCTCTCTGAGCCTCAGAACGTGAAGATC  150

seq1  TTGTGCCTCGTAAACAAGCTGATACTAGCACAATACCTAAGGTAGCGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCCTCGTAAACAAGCTGATACTAGCACAATACCTAAGGTAGCGTTT  200

seq1  GGCCCATAGCAGCTGCTCATTAAATGTCAGCCATTCCTTTTGTTGTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCATAGCAGCTGCTCATTAAATGTCAGCCATTCCTTTTGTTGTTGTT  250

seq1  GCCTAGAAACCCGAAGAATGTGGAAATCCAAAGCTACATACAGTAGGGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGAAACCCGAAGAATGTGGAAATCCAAAGCTACATACAGTAGGGAC  300

seq1  CTGTCCCACCTGTCTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCCACCTGTCTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  350

seq1  TGTCTGCTTCCACTTCCATAAAACTGGGATGGGCTTCTTTATGGAAATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCTTCCACTTCCATAAAACTGGGATGGGCTTCTTTATGGAAATGG  400

seq1  CCAACCATTTCTCCCTTTCATTCCATACCAGCTATAAAACCAGATGACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCATTTCTCCCTTTCATTCCATACCAGCTATAAAACCAGATGACTC  450

seq1  ATGTTCACCACAATACCAGTTTAGCCTGTCTGACAGCTGGAAAACAAACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCACCACAATACCAGTTTAGCCTGTCTGACAGCTGGAAAACAAACG  500

seq1  CTATTCACCAGTGCCTTTACCCTTGACTCTGGGCTTCACGAAGCGCCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCACCAGTGCCTTTACCCTTGACTCTGGGCTTCACGAAGCGCCTGG  550

seq1  ATAGACAGACATCTCCCAGCAGAGAGCCTATATTAACTCAGGTTCAGATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACAGACATCTCCCAGCAGAGAGCCTATATTAACTCAGGTTCAGATC  600

seq1  CCTGCTCTACTGCTCAACA-GGGCAA-TGGAGTGAGTGTCCTGA-CCTCT  647
      ||||||||||||||||||| |||||| ||||||||||||||||| |||||
seq2  CCTGCTCTACTGCTCAACAGGGGCAATTGGAGTGAGTGTCCTGACCCTCT  650

seq1  CTAAGCCTTGCCTGGGGATGGATGGGATCCCTCTGAGGATATC-TGAAGC  696
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTAAGCCTTGCCTGGGGATGGATGGGATCCCTCTGAGGATATCTTGAAGC  700

seq1  CACATTGGCACGAAAGGAAATCTAACAGTCTCTACCAGGCTGGGCGTGGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTGGCACGAAAGGAAATCTAACAGTCTCTACCAGGCTGGGCGTGGT  750

seq1  GACC-CATGCCTTTTAAACTCGAACCTTGGGAGGCTGAGGCAGG-TGGAT  794
      |||| | |||||||||||||||||||||| |||||||||||||| |||||
seq2  GACCTCTTGCCTTTTAAACTCGAACCTTGAGAGGCTGAGGCAGGTTGGAT  800

seq1  C-TCTAGGAGTTT-GAGGCCAACCTG-GGTTCC  824
      | ||||||||||| |||||||||||| ||||||
seq2  CTTCTAGGAGTTTGGAGGCCAACCTGTGGTTCC  833

seq1: chr5_119423401_119423486
seq2: B6Ng01-204N15.g_78_163 (reverse)

seq1  CTCCCTCTACCCACTCCTCTCTCCTCTAGTCTCCTCTCTCCTCCTCCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCTACCCACTCCTCTCTCCTCTAGTCTCCTCTCTCCTCCTCCCTT  50

seq1  CTTCCATGAACCTCGTAGAGCAGATATTTTCATCTG  86
      ||||||||||||||||||||||||||||||||||||
seq2  CTTCCATGAACCTCGTAGAGCAGATATTTTCATCTG  86

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information