BAC Information

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BAC

Clone NameB6Ng01-205J02
Chromosome5 (Build37)
Map Location 60,475,398 - 60,476,517
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041425, LOC546866
Downstream geneCbfa2t2-ps1, LOC100041498, LOC666597
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205J02.bB6Ng01-205J02.g
ACCGA025215GA025216
length1,0211,132
definitionB6Ng01-205J02.b B6Ng01-205J02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctggtggagtttttggggtcacttacatatactttcatatcat
cagcaagtagtgatattttgacttcttcctttccaacttatcatttttac
ctcctttgttatcagattgctctggctaggactttgagtacgatattgaa
cagggagggaaagtgtgtgcagccttgtttggtctctgattttagtggaa
ttgcttcaagtttatctgcatttatttgaagttggctattggtttgctga
atattggttttactaggtttagatatgggcctttaaatcctcatatttcc
aaaattttattacgaagggatgttgaattttgtcaaatgctttctcagca
tctaataaaatgatcatgtgttgttttttctttttgtttctttgtttttt
ttatatagtagagtactttgaaggatttgcatatattgaaccatccctgc
atccctgagatgaagcctacttaatcatgatggatcatcattttgatgtg
ttcttggaatctgtttacaagaatttttttgagtatttttgcattgacat
tcataaaggtaattggtctgaagttctctttctttgttgggtcttcgtgt
ggtttaggtatcagaggaagttaacttcataggatgaattgggaagtgtt
tctactgtttcaattttgtggaataatttgaagaatattagtattaggtc
ttctttgaaggtctgatagaactcggccctgaacccatctggtcccaggc
tttttttggttcggagactatcaatgacagttttctattttctctaaatg
atatgggactgtttagatagtttgtctgatcctgctttaactttgttacc
tgatatctgtcctagaaaactgttcatatcatccaggttttccagttttg
ttgagtatacgccttttataataaggatccgatgacttttctggattcct
cagatttctgttttctccttttcatttatgtatagggtaatagcacactg
tcccctgtaatcctctagtaa
gaattcatttttagctctttaccccatttttaattagggttatttaattg
tctggagtctaactttttgagttctttgcatatattgggtattagccctc
tatcggatgtaggattaataaagatctttccccaatatgttggttgcaag
gatttgaattccatccccagaacccacagagaaaccagtaaaaactaaag
ttttgtatacttatgatcccagtgctcagaagggagagacagagagattc
catggcaatcagtggctacaagcccagcactccctgcaaatctgcaaact
cttgcttatgagactttgtctcaaaaaataaataagtaaataaaacccac
aaaacaaagaaaataaaaacacaatactaccatcaccattaccacaaaca
acaagaagaagaacaacaacaataacagtacaatgttctcctgaaaatca
gcacataatgttttcttctgttctccacagcagcatacacattgtattca
tatatgtacaaggattagtacaaacaacattaatctcttaattctttaga
taaagatgcatgtaatgaaagctgaaaagttttatatttctactatgttt
tccacaatagtattttgatgaaaagagatatgaccattttataatccttg
caggtacaatattgacttttattcatgaggttttgtctgatgcaagttgc
aaattattattgttgtgcatgaatttatgaaagggggttgttacagtgaa
atcccattttgaaatgaggaagtgacatgattttttcgtttgggcctgtg
tttaataactattctgttgctgtgataaaacaaaaagacaatgatcagaa
ggtatcttgtgggacatatttattttgccttaactttcagaagagatgtc
caccataacaggggaaggatttctaggacagcaagctttgtaggtttgga
ggacgaagcagaaaaaatcaaatcgtaaatcatttaattgggaagtagag
acatacaacttggaatagaggtcaagctataaagtatcaagtcactccta
gtgacatatttctttccaataaatctgcatacaaccttaaacaggtagca
ctagttagcactggacactttccaaatatctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_60475398_60476517
seq2: B6Ng01-205J02.g_71_1202 (reverse)

seq1  CAGATATTTG--AAGTGT-CAGTGCCTAACTAGTGCTA-CTGTTTAGGGT  46
      ||||||||||  |||||| ||||| ||||||||||||| ||||||| |||
seq2  CAGATATTTGGAAAGTGTCCAGTG-CTAACTAGTGCTACCTGTTTAAGGT  49

seq1  GGTTATGCAGATTTATTTGAAAGAAATATGTCACTAGGAGTTGACTTTGA  96
       | |||||||||||||| |||||||||||||||||||||| |||| ||||
seq2  TG-TATGCAGATTTATTGGAAAGAAATATGTCACTAGGAG-TGAC-TTGA  96

seq1  TACTTTATAGCTTTGACTCTATT-CAAGTTGTATGTCTCTACTT-CCAAT  144
      |||||||||||||   ||||||| |||||||||||||||||||| |||||
seq2  TACTTTATAGCTTGACCTCTATTCCAAGTTGTATGTCTCTACTTCCCAAT  146

seq1  TAATGGTTTTACGATTTGA-TTTTTCTGCTTCGTCCTCCAAA-CTAC-AA  191
      |||  | |||||||||||| |||||||||||||||||||||| |||| ||
seq2  TAAATGATTTACGATTTGATTTTTTCTGCTTCGTCCTCCAAACCTACAAA  196

seq1  GCTTGCTGTCCT-GGAATCCTT-CCCTGTTATGGTGGACATCTCTTCTGA  239
      |||||||||||| | ||||||| |||||||||||||||||||||||||||
seq2  GCTTGCTGTCCTAGAAATCCTTCCCCTGTTATGGTGGACATCTCTTCTGA  246

seq1  AAGTTAAGGCAAAATAAATATGT-CCACAAGATA-CTTCTGATCATTGTC  287
      ||||||||||||||||||||||| |||||||||| |||||||||||||||
seq2  AAGTTAAGGCAAAATAAATATGTCCCACAAGATACCTTCTGATCATTGTC  296

seq1  -TTTTGTTTTATCACAGCAACAGAATAGTTATT-AACACAGGCCCAAACG  335
       |||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTTTTGTTTTATCACAGCAACAGAATAGTTATTAAACACAGGCCCAAACG  346

seq1  -AAAAATCATGTCACTTCCTCATTTCAAAATGGGATTTCACTGTAACAAC  384
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATCATGTCACTTCCTCATTTCAAAATGGGATTTCACTGTAACAAC  396

seq1  CCCCTTTCATAAATTCATGCACAACAATAATAATTTGCAACTTGCATCAG  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTCATAAATTCATGCACAACAATAATAATTTGCAACTTGCATCAG  446

seq1  ACAAAACCTCATGAATAAAAGTCAATATTGTACCTGCAAGGATTATAAAA  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACCTCATGAATAAAAGTCAATATTGTACCTGCAAGGATTATAAAA  496

seq1  TGGTCATATCTCTTTTCATCAAAATACTATTGTGGAAAACATAGTAGAAA  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCATATCTCTTTTCATCAAAATACTATTGTGGAAAACATAGTAGAAA  546

seq1  TATAAAACTTTTCAGCTTTCATTACATGCATCTTTATCTAAAGAATTAAG  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAACTTTTCAGCTTTCATTACATGCATCTTTATCTAAAGAATTAAG  596

seq1  AGATTAATGTTGTTTGTACTAATCCTTGTACATATATGAATACAATGTGT  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAATGTTGTTTGTACTAATCCTTGTACATATATGAATACAATGTGT  646

seq1  ATGCTGCTGTGGAGAACAGAAGAAAACATTATGTGCTGATTTTCAGGAGA  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGCTGTGGAGAACAGAAGAAAACATTATGTGCTGATTTTCAGGAGA  696

seq1  ACATTGTACTGTTATTGTTGTTGTTCTTCTTCTTGTTGTTTGTGGTAATG  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTACTGTTATTGTTGTTGTTCTTCTTCTTGTTGTTTGTGGTAATG  746

seq1  GTGATGGTAGTATTGTGTTTTTATTTTCTTTGTTTTGTGGGTTTTATTTA  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGTAGTATTGTGTTTTTATTTTCTTTGTTTTGTGGGTTTTATTTA  796

seq1  CTTATTTATTTTTTGAGACAAAGTCTCATAAGCAAGAGTTTGCAGATTTG  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTATTTTTTGAGACAAAGTCTCATAAGCAAGAGTTTGCAGATTTG  846

seq1  CAGGGAGTGCTGGGCTTGTAGCCACTGATTGCCATGGAATCTCTCTGTCT  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGTGCTGGGCTTGTAGCCACTGATTGCCATGGAATCTCTCTGTCT  896

seq1  CTCCCTTCTGAGCACTGGGATCATAAGTATACAAAACTTTAGTTTTTACT  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTTCTGAGCACTGGGATCATAAGTATACAAAACTTTAGTTTTTACT  946

seq1  GGTTTCTCTGTGGGTTCTGGGGATGGAATTCAAATCCTTGCAACCAACAT  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTCTGTGGGTTCTGGGGATGGAATTCAAATCCTTGCAACCAACAT  996

seq1  ATTGGGGAAAGATCTTTATTAATCCTACATCCGATAGAGGGCTAATACCC  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGGAAAGATCTTTATTAATCCTACATCCGATAGAGGGCTAATACCC  1046

seq1  AATATATGCAAAGAACTCAAAAAGTTAGACTCCAGACAATTAAATAACCC  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATGCAAAGAACTCAAAAAGTTAGACTCCAGACAATTAAATAACCC  1096

seq1  TAATTAAAAATGGGGTAAAGAGCTAAAAATGAATTC  1120
      ||||||||||||||||||||||||||||||||||||
seq2  TAATTAAAAATGGGGTAAAGAGCTAAAAATGAATTC  1132