BAC Information

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BAC

Clone NameB6Ng01-205J03
Chromosome5 (Build37)
Map Location 137,857,965 - 137,858,998
singlet/doubletsinglet
Overlap geneZan
Upstream geneCutl1, Mylc2pl, Emid2, LOC677021, Rabl5, Fis1, Cldn15, Znhit1, Plod3, LOC639992, Vgf, Ap1s1, Serpine1, Trim56, Muc3, LOC100040941, Ache, 2700038N03Rik, Ars2, Trip6, Slc12a9, Ephb4
Downstream geneEG665591, Epo, Pop7, EG666372, Perq1, Gnb2, Actl6b, Trfr2, Mospd3, EG640050, Pcolce, Fbxo24, Lrch4, Sap25, Irs3, Hrbl, LOC624083, 6430598A04Rik, Tsc22d4, 2010007H12Rik, Bcdin3, Zcwpw1, Pilra, Pilrb1, Pilrb2, LOC100041016, LOC100041027, Cyp3a13, LOC666429, Gje1, Azgp1, EG243302, LOC100041050, Smok3a, Smok3b, Smok3c, Zkscan1, Zscan21, Zfp113, Cops6, Mcm7, Ap4m1, Taf6, 2610019P18Rik, BC038925, Gm454, BC055004, 0910001L09Rik, BC037034, Gal3st4, Gpc2, Stag3, Got2-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205J03.bB6Ng01-205J03.g
ACCGA025217GA025218
length3341,034
definitionB6Ng01-205J03.b B6Ng01-205J03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ataagtcactccatcagcatcactgtgggggaggtcacttctcagcttcc
acacccatgtcacaaagaacagggtgtttgtctcctatgggaggaactcg
caactggggtctgttttgagtctgttcaggagggcagtgggggtgaggaa
ccccagttccttaatggctgctgagtgtccaagttcacctccttccttcc
ttccttccttccttctttcctttctctctctctctctctctctctctctc
tctctctctctctctctctctcactctttgtgtgtctcaatttttgtttt
ttttttttttttttttttgtttttttttcttttt
gaattctatgctactcctcagcccccacccccacctcactctagattctt
ggcagctgccataccaatgagcaagatctttatcctcataccagtggctc
ctaggccatttctctactgctaagccacacctaagccctcttagagcatc
cttacaagttttctacatttgagccatacccccagcctctcactggagga
tacaagacagttttgtactacagagtcatgcccctagactctcttaggcc
attctaggtaaatgatctatcatttacagcattctcagcccctcccaaat
acctgccattcctagatgatggttctagtcataggttttgcatctgagct
gtgcttccgagcaccaagggagagtcctctgccccagttctaccagtgag
ccacacctcagccacttactgaaagactgtactatcgagctatgccacaa
tcccagaggcatccttttctctccaaatcgtaacctgttgatagagaggg
cagaggtcagcccttgagaggggagtcagggctgtttctctctaaccagt
ccctctgtcccgactcccttcctctccccttggcattgcaggcagataag
acctggatcaacagaggctgtactcagagctgcacctgcaagggaggggc
catccagtgccagaaatttcagtgtccctcagagacttactgcaaggaca
tcgaggacggcaacagtactgcaccagaatctgtaagggagccatggtgg
aggtggagaatgtatgcatgtggctacagagctcagaggcagagcaaagt
ggagctttatttcccctggcctcagaggcccgagataggaaagaccacag
tgaggagggctttttggaacctttgactctgctacgtcccttctctcttc
ttagttcctccatggttagtccccacattagcttgagatagcccttcatc
ttttacgtcttactttaaattgcgtgtattagtttatgtcaatgggtggg
tatgtcccatgaatgcacatgcttgcagccagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_137857965_137858998
seq2: B6Ng01-205J03.g_71_1104 (reverse)

seq1  CTCTGGCTGCCATGCATGTTGCACTCATGTGGACATACCCACCCATTGAC  50
      ||||||||| || ||||| |||| ||||| ||||||||||||||||||||
seq2  CTCTGGCTG-CAAGCATG-TGCATTCATG-GGACATACCCACCCATTGAC  47

seq1  ATAAACTAATACACGCAATTTAAAGTAAGACGT-AAAGATGAAGGGCTAT  99
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATAAACTAATACACGCAATTTAAAGTAAGACGTAAAAGATGAAGGGCTAT  97

seq1  CTCAAGCTAATGTGGGGACTAACCATGGA-GAACTAAG-AGAGAGAAGGG  147
      ||||||||||||||||||||||||||||| |||||||| |||||||||||
seq2  CTCAAGCTAATGTGGGGACTAACCATGGAGGAACTAAGAAGAGAGAAGGG  147

seq1  ACGTAGCAGAGTCAAAGGTTCCCAAAAGCCCTCCTCACTGTGGTCTTTCC  197
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ACGTAGCAGAGTCAAAGGTTCCAAAAAGCCCTCCTCACTGTGGTCTTTCC  197

seq1  TATCTCGGGCCTCTGAGGCCAGGGGAACT-AAGCTCCACTTTGCTCTGCC  246
      ||||||||||||||||||||||||||| | ||||||||||||||||||||
seq2  TATCTCGGGCCTCTGAGGCCAGGGGAAATAAAGCTCCACTTTGCTCTGCC  247

seq1  TCTGAGCTCTGTAGCCACATGCATACATTCTCCACCTCCACCATGGCTCC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCTCTGTAGCCACATGCATACATTCTCCACCTCCACCATGGCTCC  297

seq1  CTTACAGATTCTGGTGCAGTTACTGTTGCCGTCCTCGATGTCCTTGCAGT  346
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTTACAGATTCTGGTGCAG-TACTGTTGCCGTCCTCGATGTCCTTGCAGT  346

seq1  AAGTCTCTGAGGGACACTGAAATTTCTGGCACTGGATGGCCCCTCCCTTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCTGAGGGACACTGAAATTTCTGGCACTGGATGGCCCCTCCCTTG  396

seq1  CAGGTGCAGCTCTGAGTACAGCCTCTGTTGATCCAGGTCTTATCTGCCTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGCAGCTCTGAGTACAGCCTCTGTTGATCCAGGTCTTATCTGCCTG  446

seq1  CAATGCCAAGGGGAGAGGAAGGGAGTCGGGACAGAGGGACTGGTTAGAGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCCAAGGGGAGAGGAAGGGAGTCGGGACAGAGGGACTGGTTAGAGA  496

seq1  GAAACAGCCCTGACTCCCCTCTCAAGGGCTGACCTCTGCCCTCTCTATCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGCCCTGACTCCCCTCTCAAGGGCTGACCTCTGCCCTCTCTATCA  546

seq1  ACAGGTTACGATTTGGAGAGAAAAGGATGCCTCTGGGATTGTGGCATAGC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTTACGATTTGGAGAGAAAAGGATGCCTCTGGGATTGTGGCATAGC  596

seq1  TCGATAGTACAGTCTTTCAGTAAGTGGCTGAGGTGTGGCTCACTGGTAGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATAGTACAGTCTTTCAGTAAGTGGCTGAGGTGTGGCTCACTGGTAGA  646

seq1  ACTGGGGCAGAGGACTCTCCCTTGGTGCTCGGAAGCACAGCTCAGATGCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGGCAGAGGACTCTCCCTTGGTGCTCGGAAGCACAGCTCAGATGCA  696

seq1  AAACCTATGACTAGAACCATCATCTAGGAATGGCAGGTATTTGGGAGGGG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTATGACTAGAACCATCATCTAGGAATGGCAGGTATTTGGGAGGGG  746

seq1  CTGAGAATGCTGTAAATGATAGATCATTTACCTAGAATGGCCTAAGAGAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAATGCTGTAAATGATAGATCATTTACCTAGAATGGCCTAAGAGAG  796

seq1  TCTAGGGGCATGACTCTGTAGTACAAAACTGTCTTGTATCCTCCAGTGAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGGGCATGACTCTGTAGTACAAAACTGTCTTGTATCCTCCAGTGAG  846

seq1  AGGCTGGGGGTATGGCTCAAATGTAGAAAACTTGTAAGGATGCTCTAAGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGGGGTATGGCTCAAATGTAGAAAACTTGTAAGGATGCTCTAAGA  896

seq1  GGGCTTAGGTGTGGCTTAGCAGTAGAGAAATGGCCTAGGAGCCACTGGTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTAGGTGTGGCTTAGCAGTAGAGAAATGGCCTAGGAGCCACTGGTA  946

seq1  TGAGGATAAAGATCTTGCTCATTGGTATGGCAGCTGCCAAGAATCTAGAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGATAAAGATCTTGCTCATTGGTATGGCAGCTGCCAAGAATCTAGAG  996

seq1  TGAGGTGGGGGTGGGGGCTGAGGAGTAGCATAGAATTC  1034
      ||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTGGGGGTGGGGGCTGAGGAGTAGCATAGAATTC  1034