BAC Information

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BAC

Clone NameB6Ng01-206F01
Chromosome5 (Build37)
Map Location 85,025,019 - 85,026,232
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039608, LOC231368, Epha5, LOC100039489
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206F01.bB6Ng01-206F01.g
ACCGA025763GA025764
length1,206115
definitionB6Ng01-206F01.b B6Ng01-206F01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gttttgccctggaatattttggtttctccatctatgttgattgaaagttt
tgatgggtatagtagcctggactggcatttgtgttctcttagagtctgca
tgacctttgaccaggatcttctgactttcgtagtctctgttgaaaagtct
agaatgataggtctacttttatttgttacttggtctttttcccttgctgc
ttttaatattctttctttactctgtgcatttaagaaacaagctataaaga
attcattagttatgaattacatatttacaaattgctaaaatattaaagta
acctctattgaataagcacttatacgttaaggctgagaatgtttgtatgg
ttgtatgttgattggtgtacactcattatctcacttaattgttataaaaa
ttcacactaatgcataaaactgtaaaataagttttactcttattttcttc
aaagttatcaataatttaatttgtgacttccttttgaaatctgaaagaat
tcaattgaatatttatactaatgtgtaagtctttccatcttattacgaag
ttctaagagctggacaatctgatcaaatgattttttttttcctgtagctc
tcagctgacaattatttgtggctgttcttccagtcatgttctgcaattga
cgctgtgcccttactgtttcttaatttaattccacatttgctcaagaatt
gctttacttatttgctggctaagaataggagttttgtgctaaatctccag
tcatttcactgtaagttttaatctaaatccacttgaggttgtcaatcact
gtaacacgagaagtagtacagtgaagcctgaaatatggtcaacatctgac
ttttccacccttctttgcatactagcaattgaaccatcaatcatatacta
tatttaaactgacatatgaaaaattggtcattttgactgaaggctttatg
attattcaaaactggcaagaaaataaacaaatattaagtgaaaaagtcct
acaaacagaggattatgaaaatacttctatcagtcatctttagactatct
ccatacctagtttttttgctctctgtatagagaaagtcggattttatagc
caatctggaaagacagtctgtgaatgaaactgtaacatttctctttgacg
atggaattagtgtattctacctgattgaagcctaccttcacctttgagtt
tcatga

tttgtttagccctgagccccattttttaatggtgttatttgatgttctgg
agtccaccttcttgagatatatatatatatatatatatatatatatatat
atatatatatatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_85025019_85026232
seq2: B6Ng01-206F01.b_50_1255 (reverse)

seq1  TCATGAAACT--AAAGTGAA-GTA-GCTTCAATCAAGTAGAAATACATTT  46
      ||||||||||  || ||||| ||| |||||||||| |||| |||||| | 
seq2  TCATGAAACTCAAAGGTGAAGGTAGGCTTCAATCAGGTAG-AATACACTA  49

seq1  ATAATCAACTCGTC-AAGAGAGATGGTACAGTTTCCATCAACCAGACTG-  94
      ||  || | ||||| |||||| ||| |||||||||  |||  ||||||| 
seq2  AT--TCCA-TCGTCAAAGAGAAATGTTACAGTTTCATTCA--CAGACTGT  94

seq1  CTTTTCAGATTTTGCTATTAAAAACCCAAC--TCTCTATACAGAGAGCAA  142
      |||| |||| || |||||  |||| || ||  |||||||||||||||| |
seq2  CTTTCCAGA-TTGGCTAT--AAAATCCGACTTTCTCTATACAGAGAGC-A  140

seq1  AAAAAATTAGGTATGGAGAATAGTCTAAAGATGACTTGATAGAAGTTATT  192
      |||||| ||||||||||| |||||||||||||||| ||||||||| ||||
seq2  AAAAAACTAGGTATGGAG-ATAGTCTAAAGATGAC-TGATAGAAG-TATT  187

seq1  TTCATAATCCTTCTGTTTGTAGGACTTTTTCACTTAATATTTGTTTATTT  242
      |||||||||| |||||||||||||||||||||||||||||||||||| ||
seq2  TTCATAATCC-TCTGTTTGTAGGACTTTTTCACTTAATATTTGTTTA-TT  235

seq1  TTCTTGCCAGTTTTTGAATAATCATAAAGCCTTCAGTCAAAATGACCAAT  292
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGCCAG-TTTTGAATAATCATAAAGCCTTCAGTCAAAATGACCAAT  284

seq1  TTTTCATATGTCAGTTTAAATATAGTATATGATTGATGGTTCAATTGCTA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATATGTCAGTTTAAATATAGTATATGATTGATGGTTCAATTGCTA  334

seq1  GTATGCAAAGAAGGGTGGAAAAGTCAGATGTTGACCATATTTCAGGCTTC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCAAAGAAGGGTGGAAAAGTCAGATGTTGACCATATTTCAGGCTTC  384

seq1  ACTGTACTACTTCTCGTGTTACAGTGATTGACAACCTCAAGTGGATTTAG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTACTACTTCTCGTGTTACAGTGATTGACAACCTCAAGTGGATTTAG  434

seq1  ATTAAAACTTACAGTGAAATGACTGGAGATTTAGCACAAAACTCCTATTC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAACTTACAGTGAAATGACTGGAGATTTAGCACAAAACTCCTATTC  484

seq1  TTAGCCAGCAAATAAGTAAAGCAATTCTTGAGCAAATGTGGAATTAAATT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCAGCAAATAAGTAAAGCAATTCTTGAGCAAATGTGGAATTAAATT  534

seq1  AAGAAACAGTAAGGGCACAGCGTCAATTGCAGAACATGACTGGAAGAACA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACAGTAAGGGCACAGCGTCAATTGCAGAACATGACTGGAAGAACA  584

seq1  GCCACAAATAATTGTCAGCTGAGAGCTACAGGAAAAAAAAAATCATTTGA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAAATAATTGTCAGCTGAGAGCTACAGGAAAAAAAAAATCATTTGA  634

seq1  TCAGATTGTCCAGCTCTTAGAACTTCGTAATAAGATGGAAAGACTTACAC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTGTCCAGCTCTTAGAACTTCGTAATAAGATGGAAAGACTTACAC  684

seq1  ATTAGTATAAATATTCAATTGAATTCTTTCAGATTTCAAAAGGAAGTCAC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTATAAATATTCAATTGAATTCTTTCAGATTTCAAAAGGAAGTCAC  734

seq1  AAATTAAATTATTGATAACTTTGAAGAAAATAAGAGTAAAACTTATTTTA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAATTATTGATAACTTTGAAGAAAATAAGAGTAAAACTTATTTTA  784

seq1  CAGTTTTATGCATTAGTGTGAATTTTTATAACAATTAAGTGAGATAATGA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTATGCATTAGTGTGAATTTTTATAACAATTAAGTGAGATAATGA  834

seq1  GTGTACACCAATCAACATACAACCATACAAACATTCTCAGCCTTAACGTA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACACCAATCAACATACAACCATACAAACATTCTCAGCCTTAACGTA  884

seq1  TAAGTGCTTATTCAATAGAGGTTACTTTAATATTTTAGCAATTTGTAAAT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGCTTATTCAATAGAGGTTACTTTAATATTTTAGCAATTTGTAAAT  934

seq1  ATGTAATTCATAACTAATGAATTCTTTATAGCTTGTTTCTTAAATGCACA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATTCATAACTAATGAATTCTTTATAGCTTGTTTCTTAAATGCACA  984

seq1  GAGTAAAGAAAGAATATTAAAAGCAGCAAGGGAAAAAGACCAAGTAACAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAAGAAAGAATATTAAAAGCAGCAAGGGAAAAAGACCAAGTAACAA  1034

seq1  ATAAAAGTAGACCTATCATTCTAGACTTTTCAACAGAGACTACGAAAGTC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGTAGACCTATCATTCTAGACTTTTCAACAGAGACTACGAAAGTC  1084

seq1  AGAAGATCCTGGTCAAAGGTCATGCAGACTCTAAGAGAACACAAATGCCA  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATCCTGGTCAAAGGTCATGCAGACTCTAAGAGAACACAAATGCCA  1134

seq1  GTCCAGGCTACTATACCCATCAAAACTTTCAATCAACATAGATGGAGAAA  1192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGGCTACTATACCCATCAAAACTTTCAATCAACATAGATGGAGAAA  1184

seq1  CCAAAATATTCCAGGGCAAAAC  1214
      ||||||||||||||||||||||
seq2  CCAAAATATTCCAGGGCAAAAC  1206


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