BAC Information

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BAC

Clone NameB6Ng01-207D20
Chromosome5 (Build37)
Map Location 68,969,760 - 68,970,839
singlet/doubletsinglet
Overlap genenone
Upstream geneD830007B15Rik, Atp8a1, LOC100042458, EG330097, EG666977, AY616753
Downstream geneLOC666996, Kctd8, LOC545756, Yipf7, Guf1, Gnpda2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207D20.bB6Ng01-207D20.g
ACCGA026449GA026450
length1,0681,087
definitionB6Ng01-207D20.b B6Ng01-207D20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctaaatcagttttataattagcctactgaagaaagttttttttt
ttttttcaagctgaatatcatatgtcaacaatgaaaaaagaggtctggtg
cctgtatttgtcatgtcatagttagactttggacttgcttgggttataga
taacagctactgttacagttctggaagctggagtctaagagcaggctcag
atacagttggtctggtgaggccatttctctaagcttctgacagctgcatt
cttgtagaccttctagactgtacacaggcttccagccagtcctcttgcct
tttttacagaagcatctgtgagacttgctttactatgacctaatttactt
tttcggccacaattcctcaaatcatcattttggaattataccttaactca
ggagtcttataaggtataaacattcattctatgacacacatagtatacca
tatgtcttcaaatttgattccatacatattcaatgacattcattctgaga
tgaagactggctatttggtaaaattatggactgcagagtaaaaagtgcag
aaacttgaattaagaaatctggggtctggcaagatgcctcagcatgtaag
agcactgactgctcttctgaaggtcttgagttcaaatcccagcaaccaca
ttgtagctcacaaccacccataatgagatttgacaccctcttctggtatg
tctgaagacagcaacagtgtacttatttataataataaataaatctttgg
tccagagagagcagggattgagcgagctgggccaaccagagtgatcaggg
atgactggaaggagcagggttgactgttgactggagggagcagaggtcct
aaattctttttttttttttttaattagtctggggttcctttatttatgtc
cagagtgaattttgcccctacttttaaaacccaagttcagttactcagac
tactcaaatgggataactattcctttacaatttcaaataatatcttttct
ttatagatatttcttattacattcaatgctatccgaaagtccctatactc
ttcccccgctctgctccc
gaattccttaatttcattatattcatttttaatggataatggctggtatg
gtccctatagcataatgggtcctcaataaatcttatttccctgtgtatac
ttctttctgatgaaataaattggagattattgtatggatcacatttcccc
ctaaatgttcaaatgttaagactcagtcaccagagaactcctaaacctga
taaacagcttcggtgaagtagctggatataaaataaactcaaacaagtga
atggcctttctctacacaaaggataaacaggctgagaaagaaattaggga
aacaacacccttcacaatagtcacaaataatataaaataccttggcgtga
ctctaactaaggaagtgaaagatctgcatgataagaacttcaagtctttg
aagaaagaaattaaagaagatctcagaagatggaaagatctcccatgctc
atagattggcagaatcaatttggtaaaaagggctatcttgccaaaagcaa
tctacagattcaatgcaatccccatcaaaattccaactcaattcttcaac
gaattagaaagcacaatctgcaaattcatctggaataacaaaaaacctag
gatagcaaaactcttctcaaggaaaaacgaacctctggtggaaccaccat
gcctgacctaaagctgtactacagagtaattgtgataaaaattgcatggt
actggtataggacagacaagtagaccaatggaatagaattgaagacccaa
caatgaacccacacacctatggccgattgatctttgacaagggagctaaa
accatccagtggaaaaaagacagcattttcaacaaatggtgctggcacaa
ctggtgcttatcatgtagaagaatgcaattgatccattcctatctccttg
tactatggtcaaatctaagggaatcaagggaacctcctacattaagacca
gagacagtgaaacttacaggaggagaaagtgggggaaaagcctcgaagat
atggcacaggggaaaatttccctaaatagacagcatggcttgtgctgtac
catcgagaatcacaaatgggacctcataaaattgcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_68969760_68970839
seq2: B6Ng01-207D20.b_42_1109

seq1  GAATTCCTAAATCAGTTTTATAATTAGCCTACTGAAGAAAGTTTTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAATCAGTTTTATAATTAGCCTACTGAAGAAAGTTTTTTTTT  50

seq1  TTTTTTCAAGCTGAATATCATATGTCAACAATGAAAAAAGAGGTCTGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCAAGCTGAATATCATATGTCAACAATGAAAAAAGAGGTCTGGTG  100

seq1  CCTGTATTTGTCATGTCATAGTTAGACTTTGGACTTGCTTGGGTTATAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATTTGTCATGTCATAGTTAGACTTTGGACTTGCTTGGGTTATAGA  150

seq1  TAACAGCTACTGTTACAGTTCTGGAAGCTGGAGTCTAAGAGCAGGCTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGCTACTGTTACAGTTCTGGAAGCTGGAGTCTAAGAGCAGGCTCAG  200

seq1  ATACAGTTGGTCTGGTGAGGCCATTTCTCTAAGCTTCTGACAGCTGCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTTGGTCTGGTGAGGCCATTTCTCTAAGCTTCTGACAGCTGCATT  250

seq1  CTTGTAGACCTTCTAGACTGTACACAGGCTTCCAGCCAGTCCTCTTGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAGACCTTCTAGACTGTACACAGGCTTCCAGCCAGTCCTCTTGCCT  300

seq1  TTTTTACAGAAGCATCTGTGAGACTTGCTTTACTATGACCTAATTTACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACAGAAGCATCTGTGAGACTTGCTTTACTATGACCTAATTTACTT  350

seq1  TTTCGGCCACAATTCCTCAAATCATCATTTTGGAATTATACCTTAACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGGCCACAATTCCTCAAATCATCATTTTGGAATTATACCTTAACTCA  400

seq1  GGAGTCTTATAAGGTATAAACATTCATTCTATGACACACATAGTATACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCTTATAAGGTATAAACATTCATTCTATGACACACATAGTATACCA  450

seq1  TATGTCTTCAAATTTGATTCCATACATATTCAATGACATTCATTCTGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTTCAAATTTGATTCCATACATATTCAATGACATTCATTCTGAGA  500

seq1  TGAAGACTGGCTATTTGGTAAAATTATGGACTGCAGAGTAAAAAGTGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACTGGCTATTTGGTAAAATTATGGACTGCAGAGTAAAAAGTGCAG  550

seq1  AAACTTGAATTAAGAAATCTGGGGTCTGGCAAGATGCCTCAGCATGTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGAATTAAGAAATCTGGGGTCTGGCAAGATGCCTCAGCATGTAAG  600

seq1  AGCACTGACTGCTCTTCTGAAGGTCTTGAGTTCAAATCCCAGCAACCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGACTGCTCTTCTGAAGGTCTTGAGTTCAAATCCCAGCAACCACA  650

seq1  TTGTAGCTCACAACCACCCATAATGAGATTTGACACCCTCTTCTGGTATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGCTCACAACCACCCATAATGAGATTTGACACCCTCTTCTGGTATG  700

seq1  TCTGAAGACAGCAACAGTGTACTTATTTATAATAATAAATAAATCTTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGACAGCAACAGTGTACTTATTTATAATAATAAATAAATCTTTGG  750

seq1  TCCAGAGAGAGCAGGGATTGAGCGAGCTGGGCCAACCAGAGTGATCAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGAGAGCAGGGATTGAGCGAGCTGGGCCAACCAGAGTGATCAGGG  800

seq1  ATGACTGGAAGGAGCAGGGTTGACTGTTGACTGGAGGGAGCAGAGGTCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTGGAAGGAGCAGGGTTGACTGTTGACTGGAGGGAGCAGAGGTCCT  850

seq1  AAATTCTTTTTTTTTTTTTTTAATTAGTCT-GGGTTCCTTTATTTATGTC  899
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAATTCTTTTTTTTTTTTTTTAATTAGTCTGGGGTTCCTTTATTTATGTC  900

seq1  CAGAGTGAATTTTGCCCCTACTTTTAAAA-CCAAGTTCAGTTACTCAGAC  948
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CAGAGTGAATTTTGCCCCTACTTTTAAAACCCAAGTTCAGTTACTCAGAC  950

seq1  TACTCAAATGGGATAACTATTCCTTTACAAATTTCAAATATAATCTTTTT  998
      |||||||||||||||||||||||||||| |||||||||||  ||||||| 
seq2  TACTCAAATGGGATAACTATTCCTTTAC-AATTTCAAATAATATCTTTTC  999

seq1  TTTCTTTTTATTAGATATTTTCTTTATTTACATTTCAAATGCTATCCCGA  1048
      |||        |||||| ||||||   |||||||   |||||||| ||||
seq2  TTT-------ATAGATA-TTTCTT--ATTACATT--CAATGCTAT-CCGA  1036

seq1  AAGTCCCCTATACTC-TCCCCCGCTCTGCTCCC  1080
      |||| |||||||||| |||||||||||||||||
seq2  AAGT-CCCTATACTCTTCCCCCGCTCTGCTCCC  1068