BAC Information

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BAC

Clone NameB6Ng01-208H12
Chromosome5 (Build37)
Map Location 151,715,577 - 151,895,754
singlet/doubletdoublet
Overlap geneLOC100040180, Kl, LOC667510, Stard13
Upstream geneLOC100040089, Rxfp2, LOC667470, Fry, LOC100042068, Gm5, XM_359419, Brca2, B230342M21Rik, BC037393, Aprin
Downstream geneLOC630708, LOC625175, LOC100042166, EG435877, EG632649, EG632671, Rfc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208H12.bB6Ng01-208H12.g
ACCGA027342GA027343
length7991,072
definitionB6Ng01-208H12.b B6Ng01-208H12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,715,577 - 151,716,370)(151,894,689 - 151,895,754)
sequence
gaattcaaagtgctttacataaatcagaatcagggaaaagccaggtgagg
tagtgcattaccatagtcccagctactcaggagactgagcaggaaaaccc
accccagtttcaaggccagcctgcgctacagagtgagtttaatgctagtc
caggctctgcagagagttactttgtaacggactatagaaatgatccctga
aagtatagtcttgagagttattttgtatattcctcttatctttttttttt
ttttttttttttttttttttttgggttttttcgagacagggtttctctgt
atagccctggctgtcctggaactcactttgtaaaccaggctgggctccaa
ctcaaattcacctgcctctgcctcccgagtgctgggattaaaggggtgca
ccaccacccccggccttattcctcttatcttaatatctcccaaaattcca
tgcccccttaactacaggtaaaagtgagacttatctacagtaaagctacc
gtgtgaagctcctgggctgtctttgtcaacttcttctccactcacatcat
atttgttaatgaaacctttagtgtttattcatttattttatgtggacaga
tgctttttgttctctgggatttatatatgtgcaccatatccatacagtgt
ccattggggccaggcaagggtgtcagatcctatgaaactgattaaggaca
gttttgagacatcctgaggggtgttgggaagtggacccaggtccctctga
aaaaaacagccagtgcttttaactggtaagccatcctctcatgcccagg
gaattctatgaagtcatctgtcctgtggtgaataggaagaatgcaggagc
tgttcttcatgtcctcctgaggaatgtcagataaggatgggcttaaaggg
cccttggcatgcaatcctgcccaaggttaagatgcttgttttcatagttt
gcacttacactgcactctcaagagcattttctgtgaataataataataat
ctgtgctatttttaaatgctgtcagcaataacaataagcagtaactgtga
tttaagatttaggaattaagaatggtgatttgtgcagaacctgatggcct
gagttcatgcagccaaaggcataagcctctgtcttctcctttctctctca
gattcgcagttccccatcaacattgcggccgtcaaaaaagaccatgactt
tcttgaaagggaccttgtagaacctctttgcaggtaagccagatgagtga
agtatctttggttttggtttctttccttggtctgtctctattttgggcag
cacaaagttaaaggttgacattaacaactttggaaatacgtttattgtgg
tcactgttgctggttggtcctggtaccctgaggatgctcagttcctgttt
ctgtagagtttaaatcttaaacagggacttggggggcacttcagacatta
gattaggaaaaagagtaagaggaagagagaagaaaagacagaagaggaga
gaaaaaagagaaagggtggatatttcagagtattgttaaatgccattttt
taaatgtgagctaatgattaggacagttaaggagacagcacagttgaggt
ggcggaaggatttcaggagggtcggtcatctcaagtgtgtcagggcaatt
gtctgagatgccctttgaggatgttcacctgacctaagttttcttttaac
atatataaagtcaagtgggtatatcttccaatcagaatacgtaaggccaa
gttaatacatctggcagattgactttatttaaactttcctcgggtaccga
attcttttaggagccgaattgttatacatgaagaattctcctccctctca
gccactttcgcaggatagttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_151715577_151716370
seq2: B6Ng01-208H12.b_46_843

seq1  GAATTCAAAGTGCTTTACATAAATCAGAATCAGGGAAAAGCCAGGTGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGTGCTTTACATAAATCAGAATCAGGGAAAAGCCAGGTGAGG  50

seq1  TAGTGCATTACCATAGTCCCAGCTACTCAGGAGACTGAGCAGGAAAACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCATTACCATAGTCCCAGCTACTCAGGAGACTGAGCAGGAAAACCC  100

seq1  ACCCCAGTTTCAAGGCCAGCCTGCGCTACAGAGTGAGTTTAATGCTAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAGTTTCAAGGCCAGCCTGCGCTACAGAGTGAGTTTAATGCTAGTC  150

seq1  CAGGCTCTGCAGAGAGTTACTTTGTAACGGACTATAGAAATGATCCCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCTGCAGAGAGTTACTTTGTAACGGACTATAGAAATGATCCCTGA  200

seq1  AAGTATAGTCTTGAGAGTTATTTTGTATATTCCTCTTATCTTTTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATAGTCTTGAGAGTTATTTTGTATATTCCTCTTATCTTTTTTTTTT  250

seq1  TTTTTTTTTTTTTTTTTTTTTTGGTTTTTTTCGAGACAGGGTTTCTCTGT  300
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTTTGGGTTTTTTCGAGACAGGGTTTCTCTGT  300

seq1  ATAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAA  350
      |||||||||||||||||||||||||||||||| |||||||||| ||| ||
seq2  ATAGCCCTGGCTGTCCTGGAACTCACTTTGTAAACCAGGCTGGGCTCCAA  350

seq1  CTCAGATTCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCA  400
      |||| ||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTCAAATTCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGGGTGCA  400

seq1  CCACCACGCCCGGCCTTATTCCTCTTATCTTAGTATCTCCCAGAATTCCA  450
      ||||||| |||||||||||||||||||||||| ||||||||| |||||||
seq2  CCACCACCCCCGGCCTTATTCCTCTTATCTTAATATCTCCCAAAATTCCA  450

seq1  TGCCCCCTTAACTACAGGTAAAAGTGAGACTTATCTACAGTAAAGCTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGCCCCCTTAACTACAGGTAAAAGTGAGACTTATCTACAGTAAAGCTACC  500

seq1  GTGTGAAGCTCCTGGGCTGTCTTTGTCAACTTCTTCTCCACTCACATCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAAGCTCCTGGGCTGTCTTTGTCAACTTCTTCTCCACTCACATCAT  550

seq1  ATTTGTTAATGAAACCTTTAGTGTTTATTCATTTATTTTATGTGTACAGA  600
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATTTGTTAATGAAACCTTTAGTGTTTATTCATTTATTTTATGTGGACAGA  600

seq1  TGCTTTTTGTTCTCTGGCATTTATATATGTGCACCATATCCATACAGTGT  650
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGCTTTTTGTTCTCTGGGATTTATATATGTGCACCATATCCATACAGTGT  650

seq1  CCATTGGGGCCAGGCAAGGGTGTCAGATCCTATGAAACTGATTAAGGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGGGGCCAGGCAAGGGTGTCAGATCCTATGAAACTGATTAAGGACA  700

seq1  GTTTTGAGACATCCTGA-GGGTGTTGGGAAGTGGACCCAGGT-CCTCTG-  747
      ||||||||||||||||| |||||||||||||||||||||||| |||||| 
seq2  GTTTTGAGACATCCTGAGGGGTGTTGGGAAGTGGACCCAGGTCCCTCTGA  750

seq1  AAAGAGCAGCCAGTGCTTTTAACTGCTAAGCCAT-CTCTCATGCCCAG  794
      ||| | ||||||||||||||||||| |||||||| |||||||||||||
seq2  AAAAAACAGCCAGTGCTTTTAACTGGTAAGCCATCCTCTCATGCCCAG  798

seq1: chr5_151894689_151895754
seq2: B6Ng01-208H12.g_67_1138 (reverse)

seq1  ACAACTACTCTGCG-AAGTGCTTGAGAGG--AGAGAATTCTTCATGTAT-  46
      |||||||  ||||| |||||  |||||||   ||||||||||||||||| 
seq2  ACAACTATCCTGCGAAAGTGGCTGAGAGGGAGGAGAATTCTTCATGTATA  50

seq1  ACATTTCTGCCTCTTTAAAAGATTCGTTACACGAGAAAGGTTTAAAT-AA  95
      ||| ||| | ||| | |||  ||||| ||| |||| || |||||||| ||
seq2  ACAATTC-GGCTCCTAAAAGAATTCGGTACCCGAGGAAAGTTTAAATAAA  99

seq1  GTCAATCTGCCAG-TGTATTTACTTGGCCTTACGTATTCTGATTTGAAGA  144
      ||||||||||||| |||||| ||||||||||||||||||||||| |||||
seq2  GTCAATCTGCCAGATGTATTAACTTGGCCTTACGTATTCTGATTGGAAGA  149

seq1  TATAACCACTTGACTTTATATATGTTAAAAAAAAACTTAGGTCAGGTTGA  194
      |||| ||||||||||||||||||||||||| ||||||||||||||| |||
seq2  TATACCCACTTGACTTTATATATGTTAAAAGAAAACTTAGGTCAGG-TGA  198

seq1  ACATCCTCAAAGGGCATCTCAGAC-ATTGCCCTGACAACACTTGAGATGA  243
      |||||||||||||||||||||||| ||||||||||| |||||||||||||
seq2  ACATCCTCAAAGGGCATCTCAGACAATTGCCCTGAC-ACACTTGAGATGA  247

seq1  CCGACCCTCCTG-AATCCTTCCGCCACCTCAACTGTGCTGTCTCCTT-AC  291
      |||||||||||| |||||||||||||||||||||||||||||||||| ||
seq2  CCGACCCTCCTGAAATCCTTCCGCCACCTCAACTGTGCTGTCTCCTTAAC  297

seq1  TGTCCTAATCATTAGCTCACATTTAAAAAATGGCATTTAACAATACTCTG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTAATCATTAGCTCACATTTAAAAAATGGCATTTAACAATACTCTG  347

seq1  AAATATCCACCCTTTCTCTTTTTTCTCTCCTCTTCTGTCTTTTCTTCTCT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCCACCCTTTCTCTTTTTTCTCTCCTCTTCTGTCTTTTCTTCTCT  397

seq1  CTTCCTCTTACTCTTTTTCCTAATCTAATGTCTGAAGTGCCCCCCAAGTC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCTTACTCTTTTTCCTAATCTAATGTCTGAAGTGCCCCCCAAGTC  447

seq1  CCTGTTTAAGATTTAAACTCTACAGAAACAGGAACTGAGCATCCTCAGGG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTAAGATTTAAACTCTACAGAAACAGGAACTGAGCATCCTCAGGG  497

seq1  TACCAGGACCAACCAGCAACAGTGACCACAATAAACGTATTTCCAAAGTT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGGACCAACCAGCAACAGTGACCACAATAAACGTATTTCCAAAGTT  547

seq1  GTTAATGTCAACCTTTAACTTTGTGCTGCCCAAAATAGAGACAGACCAAG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATGTCAACCTTTAACTTTGTGCTGCCCAAAATAGAGACAGACCAAG  597

seq1  GAAAGAAACCAAAACCAAAGATACTTCACTCATCTGGCTTACCTGCAAAG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAACCAAAACCAAAGATACTTCACTCATCTGGCTTACCTGCAAAG  647

seq1  AGGTTCTACAAGGTCCCTTTCAAGAAAGTCATGGTCTTTTTTGACGGCCG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCTACAAGGTCCCTTTCAAGAAAGTCATGGTCTTTTTTGACGGCCG  697

seq1  CAATGTTGATGGGGAACTGCGAATCTGAGAGAGAAAGGAGAAGACAGAGG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTTGATGGGGAACTGCGAATCTGAGAGAGAAAGGAGAAGACAGAGG  747

seq1  CTTATGCCTTTGGCTGCATGAACTCAGGCCATCAGGTTCTGCACAAATCA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGCCTTTGGCTGCATGAACTCAGGCCATCAGGTTCTGCACAAATCA  797

seq1  CCATTCTTAATTCCTAAATCTTAAATCACAGTTACTGCTTATTGTTATTG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTTAATTCCTAAATCTTAAATCACAGTTACTGCTTATTGTTATTG  847

seq1  CTGACAGCATTTAAAAATAGCACAGATTATTATTATTATTCACAGAAAAT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGCATTTAAAAATAGCACAGATTATTATTATTATTCACAGAAAAT  897

seq1  GCTCTTGAGAGTGCAGTGTAAGTGCAAACTATGAAAACAAGCATCTTAAC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGAGAGTGCAGTGTAAGTGCAAACTATGAAAACAAGCATCTTAAC  947

seq1  CTTGGGCAGGATTGCATGCCAAGGGCCCTTTAAGCCCATCCTTATCTGAC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGCAGGATTGCATGCCAAGGGCCCTTTAAGCCCATCCTTATCTGAC  997

seq1  ATTCCTCAGGAGGACATGAAGAACAGCTCCTGCATTCTTCCTATTCACCA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCAGGAGGACATGAAGAACAGCTCCTGCATTCTTCCTATTCACCA  1047

seq1  CAGGACAGATGACTTCATAGAATTC  1066
      |||||||||||||||||||||||||
seq2  CAGGACAGATGACTTCATAGAATTC  1072