BAC Information

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BAC

Clone NameB6Ng01-211D01
Chromosome5 (Build37)
Map Location 63,742,966 - 63,743,526
singlet/doubletsinglet
Overlap genenone
Upstream geneCentd1
Downstream gene3110047P20Rik, LOC100042133, 0610040J01Rik, AA536743, LOC100041636, LOC100041646, Pgm1, Tbc1d1, Ppia-ps22
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211D01.bB6Ng01-211D01.g
ACCGA029331GA029332
length1,197561
definitionB6Ng01-211D01.b B6Ng01-211D01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccattttttaatggggttactggatt
ttctggagtccaccttcttgagttatttatatatattggatattagtccc
ctatctgatttaggataagtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttgtgccttacagaagctttgcaatttta
tgaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctattcaggattttttcccctgtacccatatcttcgaggcttttccctac
tttctcctctataagtttcactgtctctggttttatgtggagtttcttga
tccacttagatttgaccttagtacaaggagataggaatggatcaattcgt
attcttctatatgataaccgccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtcactatagcagtaccatgcagtttttatcacaattgc
tctgtagtacagctataagttaggcatggtgattccaccagaagttcttt
tatccttgagaagagtttttgctatcctaggtttttttgttattccagat
ggatttgcagattgccctttctagttccttgaagaattgagttggaattt
tgatggggattacattgaatctgtagattgcttttggcaagacagtcatt
tttactatattgatcttgccaatccatgagcatgggagatttttccatct
tctgagttcttctttaatgatttcttcctttcttgatatctctctctctc
tctctttctctctctcaaaatgcagggaaattccaggggctggtaaactc
tttttctatgctgagcatccagctgctcttgtaccagctgctcaaatgcc
ctgtaaattttccttagtcaaggtcattgacctacttacacaggctagta
ctttcaccatttaaggtattgaaattgggtacttcagcagtggttctgtt
ataattgggaactcatccttgcattaatgttcctgagactgataatgcat
aagctggatttttattttatctttttagagaacactaatatccagta
gaattctggggaggagtaggtgacctctatcttaatcttggatctatctc
tagggacactccagaactattgctggggcctgtgggggctggaaactatg
ctggagaagtctggaaactgctgctgacccattgtctttgcctcaaacca
ggttctaaagcctggacttgcttggacttaccaagggagctgggagggag
aagggacagagaagggacagagataggaatgaggaggttcaagatcaggt
gtggagagtgaagaagagatggccagatggccatgagaataatggaaaca
gatatctaggtctaatcttctgaactgccgatttgaagcctattatggag
tcagccaagccttttcagtaacaatacatgacaataacatagcccactac
tacttactgcatgcttactgattaccaaaagctgcacaccttaggagaat
ttcctgtctctctgcttctctctctctttctgtcttagtgcctctgtcat
tctctctgacttccctctcttctctctctctctctctctctctctctctc
tctctctctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_63742966_63743526
seq2: B6Ng01-211D01.g_66_626

seq1  GAATTCTGGGGAGGAGTAGGTGACCTCTATCTTAATCTTGGATCTATCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGGAGGAGTAGGTGACCTCTATCTTAATCTTGGATCTATCTC  50

seq1  TAGGGACACTCCAGAACTATTGCTGGGGCCTGTGGGGGCTGGAAACTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGACACTCCAGAACTATTGCTGGGGCCTGTGGGGGCTGGAAACTATG  100

seq1  CTGGAGAAGTCTGGAAACTGCTGCTGACCCATTGTCTTTGCCTCAAACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGAAGTCTGGAAACTGCTGCTGACCCATTGTCTTTGCCTCAAACCA  150

seq1  GGTTCTAAAGCCTGGACTTGCTTGGACTTACCAAGGGAGCTGGGAGGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTAAAGCCTGGACTTGCTTGGACTTACCAAGGGAGCTGGGAGGGAG  200

seq1  AAGGGACAGAGAAGGGACAGAGATAGGAATGAGGAGGTTCAAGATCAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGACAGAGAAGGGACAGAGATAGGAATGAGGAGGTTCAAGATCAGGT  250

seq1  GTGGAGAGTGAAGAAGAGATGGCCAGATGGCCATGAGAATAATGGAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGAGTGAAGAAGAGATGGCCAGATGGCCATGAGAATAATGGAAACA  300

seq1  GATATCTAGGTCTAATCTTCTGAACTGCCGATTTGAAGCCTATTATGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCTAGGTCTAATCTTCTGAACTGCCGATTTGAAGCCTATTATGGAG  350

seq1  TCAGCCAAGCCTTTTCAGTAACAATACATGACAATAACATAGCCCACTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCAAGCCTTTTCAGTAACAATACATGACAATAACATAGCCCACTAC  400

seq1  TACTTACTGCATGCTTACTGATTACCAAAAGCTGCACACCTTAGGAGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACTGCATGCTTACTGATTACCAAAAGCTGCACACCTTAGGAGAAT  450

seq1  TTCCTGTCTCTCTGCTTCTCTCTCTCTTTCTGTCTTAGTGCCTCTGTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTCTCTCTGCTTCTCTCTCTCTTTCTGTCTTAGTGCCTCTGTCAT  500

seq1  TCTCTCTGACTTCCCTCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGACTTCCCTCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  550

seq1  TCTCTCTCTCT  561
      |||||||||||
seq2  TCTCTCTCTCT  561