BAC Information

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BAC

Clone NameB6Ng01-211D07
Chromosome5 (Build37)
Map Location 18,697,315 - 18,698,441
singlet/doubletsinglet
Overlap genenone
Upstream geneGnai1, LOC100041818, LOC668167
Downstream gene4921504A21Rik, Magi2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211D07.bB6Ng01-211D07.g
ACCGA029339GA029340
length4941,126
definitionB6Ng01-211D07.b B6Ng01-211D07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttgtttagctctgagccccattttttaatggggttatttgattttctgg
agtccactttcttgagttctttatatatattgaatattagtcccctatct
gatttaggataggtaaaggtcctttcccaatctgttggtggtctttttgt
cttattaacggtgtcttttgccttgcagaagctttgcaattttatgaggt
gccatttgtcaattcttgatcttacagcacaagccattgctgttctattc
aggaattttcccctgggatacccaatatataagatacaatttgctaaatg
catgaaactcaagaagaatgaagaacaacattatgaactaaccagtaccc
cggagctcttaactctagctgcatatgtatcaaaagatggcctagttggc
catcactggaaagagaggcccattggacttgcaaactttatatgccccag
tacaggggaacgccagggccaaaaagtgggagtgggtgggtagg

gaattcaaacactggagacagtgagtcacagacagcagtaattaaaatgc
agtggccctgctgaggaaatcacagtaaggcttacttacacacgctgacc
aacagtggatgaactaccatcctcatcactagtccctgtttattggaatt
gatcctaattactttcaacattaacaagccatgccttcaacttgaattta
atctattccttagaacattcattcattgttatcccctaaattctgcttca
ggaaatagttctttttttttttttttcttataaaatgcacacattagaaa
aagtttgttgatttcaaataaaatgcaaattatatatccactgctatatt
tttcttcatagttatgaaaggaagccattttaaaattatcaagtttcatt
gattatgatttcacggcatgcacctcaattccacttatctcccagtttgt
ccatatctgaaacctccatagctaaacaaaacaatacaaagaaacaaaca
aataaatcaaaccaaccaaccaacaaccacatctcaccatggaagctgtg
gagtgtcactgtgtgtcacttctttgtcaaaacagcatcacttgcaaatg
ttcattgcactgagtcagtggcctgtttctaggcttctggcgtctgccac
atttacaatactggattctcactgggactcctctcctgcatcagcactcc
tggtgttgccctgggtcatgttgatcctgcagctttagtcctgcaggact
ggtcccttttttcacctgctccatcagttcacagatgtggtagatgttgg
catgggccaacacaagcatcctggacttgggactaggtgatagctgagtt
ggtctgcccagcagctctctcacacccaggactctttcaatgtcttttct
gactatgttatttttacccattttctctgctgattgctctaaaagccagt
caaggtaaaggaccattctcaaatcagattccatagagagacctattcaa
cgtacatgatggcaggagttctcagaatccaccaatgatactgagaacat
tctcaacaacttgacagctctggagctccccagtgtttctttcagtacag
tcacagaatctggtctacacaaagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_18697315_18698441
seq2: B6Ng01-211D07.g_66_1191

seq1  GAATTCAAACACTGGAGACAGTGAGTCACAGACAGCAGTAATTAAAATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACACTGGAGACAGTGAGTCACAGACAGCAGTAATTAAAATGC  50

seq1  AGTGGCCCTGCTGAGGAAATCACAGTAAGGCTTACTTACACACGCTGACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCCCTGCTGAGGAAATCACAGTAAGGCTTACTTACACACGCTGACC  100

seq1  AACAGTGGATGAACTACCATCCTCATCACTAGTCCCTGTTTATTGGAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGGATGAACTACCATCCTCATCACTAGTCCCTGTTTATTGGAATT  150

seq1  GATCCTAATTACTTTCAACATTAACAAGCCATGCCTTCAACTTGAATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTAATTACTTTCAACATTAACAAGCCATGCCTTCAACTTGAATTTA  200

seq1  ATCTATTCCTTAGAACATTCATTCATTGTTATCCCCTAAATTCTGCTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTCCTTAGAACATTCATTCATTGTTATCCCCTAAATTCTGCTTCA  250

seq1  GGAAATAGTTCTTTTTTTTTTTTTTTCTTATAAAATGCACACATTAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATAGTTCTTTTTTTTTTTTTTTCTTATAAAATGCACACATTAGAAA  300

seq1  AAGTTTGTTGATTTCAAATAAAATGCAAATTATATATCCACTGCTATATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGTTGATTTCAAATAAAATGCAAATTATATATCCACTGCTATATT  350

seq1  TTTCTTCATAGTTATGAAAGGAAGCCATTTTAAAATTATCAAGTTTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCATAGTTATGAAAGGAAGCCATTTTAAAATTATCAAGTTTCATT  400

seq1  GATTATGATTTCACGGCATGCACCTCAATTCCACTTATCTCCCAGTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATGATTTCACGGCATGCACCTCAATTCCACTTATCTCCCAGTTTGT  450

seq1  CCATATCTGAAACCTCCATAGCTAAACAAAACAATACAAAGAAACAAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATCTGAAACCTCCATAGCTAAACAAAACAATACAAAGAAACAAACA  500

seq1  AATAAATCAAACCAACCAACCAACAACCACATCTCACCATGGAAGCTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATCAAACCAACCAACCAACAACCACATCTCACCATGGAAGCTGTG  550

seq1  GAGTGTCACTGTGTGTCACTTCTTTGTCAAAACAGCATCACTTGCAAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTCACTGTGTGTCACTTCTTTGTCAAAACAGCATCACTTGCAAATG  600

seq1  TTCATTGCACTGAGTCAGTGGCCTGTTTCTAGGCTTCTGGCGTCTGCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGCACTGAGTCAGTGGCCTGTTTCTAGGCTTCTGGCGTCTGCCAC  650

seq1  ATTTACAATACTGGATTCTCACTGGGACTCCTCTCCTGCATCAGCACTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACAATACTGGATTCTCACTGGGACTCCTCTCCTGCATCAGCACTCC  700

seq1  TGGTGTTGCCCTGGGTCATGTTGATCCTGCAGCTTTAGTCCTGCAGGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTGCCCTGGGTCATGTTGATCCTGCAGCTTTAGTCCTGCAGGACT  750

seq1  GGTCCCTTTTTTCACCTGCTCCATCAGTTCACAGATGTGGTAGATGTTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCTTTTTTCACCTGCTCCATCAGTTCACAGATGTGGTAGATGTTGG  800

seq1  CATGGGCCAACACAAGCATCCTGGACTTGGGACTAGGTGATAGCTGAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGCCAACACAAGCATCCTGGACTTGGGACTAGGTGATAGCTGAGTT  850

seq1  GGTCTGCCCAGCAGCTCTCTCACACCCAGGACTCTTTCAATGTCTTTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGCCCAGCAGCTCTCTCACACCCAGGACTCTTTCAATGTCTTTTCT  900

seq1  GACTATGTTATTTTTACCCATTTTCTCTGCTGATTGCTCTAAAAGCCAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATGTTATTTTTACCCATTTTCTCTGCTGATTGCTCTAAAAGCCAGT  950

seq1  CAAGGTAAAGGACCATTCTCAAATCAGATTCCATAGAGAGACCTATTCAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTAAAGGACCATTCTCAAATCAGATTCCATAGAGAGACCTATTCAA  1000

seq1  CGTACATGATGGCAGGAGTCTTCAGAAT-CACCATGAATACTGAGAACCA  1049
      |||||||||||||||||||  ||||||| |||||   |||||||||| ||
seq2  CGTACATGATGGCAGGAGTTCTCAGAATCCACCAATGATACTGAGAA-CA  1049

seq1  TTCTC-ACAACTTGACAGCCTCCTGAGCTCCCCCAGTGTTTCTTTCAGTA  1098
      ||||| |||||||||||| |||  ||||| ||||||||||||||||||| 
seq2  TTCTCAACAACTTGACAG-CTCTGGAGCT-CCCCAGTGTTTCTTTCAGT-  1096

seq1  ACAGTCACAGAATCT-GTCTACACAAAGTC  1127
      ||||||||||||||| ||||||||||||||
seq2  ACAGTCACAGAATCTGGTCTACACAAAGTC  1126


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