MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-211J02
Chromosome	5 (Build37)
Map Location	103,934,786 - 104,038,905
singlet/doublet	doublet
Overlap gene	Ptpn13, Slc10a6
Upstream gene	Arhgap24, Mapk10, LOC666563, 4930429D17Rik, LOC100041039, 1700021F02Rik, LOC100041049
Downstream gene	1700016H13Rik, Aff1, Klhl8, Hsd17b13, EG666629, Hsd17b11, Nudt9, Sparcl1, LOC100041136, Dspp, Dmp1, LOC100041145, Ibsp, Mepe, Spp1, Pkd2, BC005561, LOC100042165, LOC100041172, D930016D06Rik, 2310012P17Rik, LOC640963
Link	Open Mouse BAC browser

Click to get alignment info.

name	Arhgap24 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231532 MGI:1922647
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Mapk10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26414 MGI:1346863
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC666563 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666563
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	4930429D17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74624 MGI:1921874
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100041039 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041039
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	1700021F02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75519 MGI:1922769
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041049 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041049
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Ptpn13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19249 MGI:103293
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc10a6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75750 MGI:1923000
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700016H13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74218 MGI:1921468
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 2 Proteins

name	Aff1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17355 MGI:1100819
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Klhl8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:246293 MGI:2179430
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hsd17b13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243168 MGI:2140804
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666629 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666629 MGI:3643346
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Hsd17b11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114664 MGI:2149821
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nudt9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74167 MGI:1921417
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sparcl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13602 MGI:108110
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041136 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041136
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Dspp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666279 MGI:109172
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dmp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13406 MGI:94910
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041145 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041145
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Ibsp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15891 MGI:96389
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mepe (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94111 MGI:2137384
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20750 MGI:98389
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pkd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18764 MGI:1099818
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC005561 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243171 MGI:3040669
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 26 ESTs

name	LOC100042165 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042165
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 72 ESTs, 6 Proteins

name	LOC100041172 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041172
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	D930016D06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100662 MGI:2442700
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	2310012P17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69623 MGI:1916873
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC640963 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:640963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 20 ESTs pseudo : _no_value

name	Arhgap24 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30840989 GeneID:231532 MGI:1922647
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho GTPase activating protein 24 transcript_id : NM_029270.1

name	Arhgap24 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375850 GeneID:231532 MGI:1922647
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho GTPase activating protein 24 transcript_id : NM_146161.2

name	Mapk10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125858478 GeneID:26414 MGI:1346863
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen activated protein kinase 10 transcript_id : NM_001081567.1

name	Mapk10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125858510 GeneID:26414 MGI:1346863
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen activated protein kinase 10 transcript_id : NM_009158.2

name	4930429D17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254134 GeneID:74624 MGI:1921874
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA 4930429D17 gene transcript_id : XM_001477947.1

name	1700021F02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254136 GeneID:75519 MGI:1922769
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700021F02 gene transcript_id : XM_001477958.1

name	LOC100041049 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254054 GeneID:100041049
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : hypothetical protein LOC100041049 transcript_id : XM_001475707.1

name	Ptpn13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134948761 GeneID:19249 MGI:103293
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein tyrosine phosphatase, non-receptor type 13 transcript_id : NM_011204.2

name	Slc10a6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802045 GeneID:75750 MGI:1923000
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 10 (sodium/bile acid cotransporter family), member 6 transcript_id : NM_029415.2

name	1700016H13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374981 GeneID:74218 MGI:1921468
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 2 Proteins product : RIKEN cDNA 1700016H13 gene, transcript variant 1 transcript_id : XM_132216.7

name	Aff1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248526 GeneID:17355 MGI:1100819
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : AF4/FMR2 family, member 1 transcript_id : NM_133919.3

name	Aff1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248528 GeneID:17355 MGI:1100819
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : AF4/FMR2 family, member 1 transcript_id : NM_001080798.1

name	Klhl8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366889 GeneID:246293 MGI:2179430
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kelch-like 8 (Drosophila) transcript_id : NM_178741.3

name	Hsd17b13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37574135 GeneID:243168 MGI:2140804
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxysteroid (17-beta) dehydrogenase 13 transcript_id : NM_198030.1

name	Hsd17b11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131125 GeneID:114664 MGI:2149821
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxysteroid (17-beta) dehydrogenase 11 transcript_id : NM_053262.3

name	Nudt9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387632 GeneID:74167 MGI:1921417
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nudix (nucleoside diphosphate linked moiety X)-type motif 9 transcript_id : NM_028794.3

name	Sparcl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982799 GeneID:13602 MGI:108110
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SPARC-like 1 (mast9, hevin) transcript_id : NM_010097.2

name	Dspp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111120321 GeneID:666279 MGI:109172
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dentin sialophosphoprotein transcript_id : NM_010080.2

name	Dmp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88900498 GeneID:13406 MGI:94910
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dentin matrix protein 1 transcript_id : NM_016779.2

name	LOC100041145 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254065 GeneID:100041145
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041145 transcript_id : XM_001475877.1

name	Ibsp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680334 GeneID:15891 MGI:96389
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrin binding sialoprotein transcript_id : NM_008318.1

name	Mepe (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16716458 GeneID:94111 MGI:2137384
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrix extracellular phosphoglycoprotein with ASARM motif (bone) transcript_id : NM_053172.1

name	Spp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678112 GeneID:20750 MGI:98389
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : secreted phosphoprotein 1 transcript_id : NM_009263.1

name	Pkd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543486 GeneID:18764 MGI:1099818
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polycystic kidney disease 2 transcript_id : NM_008861.2

name	BC005561 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254068 GeneID:243171 MGI:3040669
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 26 ESTs product : cDNA sequence BC005561 transcript_id : XM_001475896.1

name	LOC100042165 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254138 GeneID:100042165
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 72 ESTs, 6 Proteins product : similar to THO complex 2 transcript_id : XM_001478280.1

name	LOC100041172 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254071 GeneID:100041172
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100041172 transcript_id : XM_001475917.1

name	D930016D06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254140 GeneID:100662 MGI:2442700
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : RIKEN cDNA D930016D06 gene transcript_id : XM_001478291.1

name	2310012P17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254079 GeneID:69623 MGI:1916873
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : RIKEN cDNA 2310012P17 gene transcript_id : XM_001487796.1

name	Arhgap24 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30840990 CCDS:CCDS19474.1 GeneID:231532 MGI:1922647
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 1 is encoded by transcript variant 1 product : Rho GTPase activating protein 24 isoform 1 protein_id : NP_083546.1

name	Arhgap24 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122687 CCDS:CCDS19475.1 GeneID:231532 MGI:1922647
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : Rho GTPase activating protein 24 isoform 2 protein_id : NP_666273.1

name	Mapk10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125858479 GeneID:26414 MGI:1346863
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004705 - JUN kinase activity [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004707 - MAP kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007254 - JNK cascade [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; SAPK/Erk/kinase 2; JNK3 beta1 protein kinase; JNK3 beta2 protein kinase product : mitogen activated protein kinase 10 isoform 2 protein_id : NP_001075036.1

name	Mapk10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125858511 GeneID:26414 MGI:1346863
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004705 - JUN kinase activity [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004707 - MAP kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007254 - JNK cascade [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; SAPK/Erk/kinase 2; JNK3 beta1 protein kinase; JNK3 beta2 protein kinase product : mitogen activated protein kinase 10 isoform 1 protein_id : NP_033184.2

name	4930429D17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254135 GeneID:74624 MGI:1921874
definition	codon_start : 1 product : hypothetical protein LOC74624 protein_id : XP_001477997.1

name	1700021F02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254137 GeneID:75519 MGI:1922769
definition	codon_start : 1 product : hypothetical protein LOC75519 protein_id : XP_001478008.1

name	LOC100041049 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254055 GeneID:100041049
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475757.1

name	Ptpn13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134948762 GeneID:19249 MGI:103293
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] codon_start : 1 note : tyrosine phosphatase product : protein tyrosine phosphatase, non-receptor type 13 protein_id : NP_035334.2

name	Slc10a6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313062 CCDS:CCDS19477.1 GeneID:75750 MGI:1923000
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008508 - bile acid:sodium symporter activity [Evidence IEA] GO_process : GO:0006814 - sodium ion transport [Evidence IEA] codon_start : 1 product : sodium-dependent organic anion transporter protein_id : NP_083691.1

name	1700016H13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20838043 GeneID:74218 MGI:1921468
definition	codon_start : 1 product : hypothetical protein LOC74218 isoform 1 protein_id : XP_132216.1

name	Aff1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124248527 GeneID:17355 MGI:1100819
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence TAS] GO_process : GO:0006350 - transcription [Evidence TAS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; robotic; homolog of human MLLT2 unidentified product : myeloid/lymphoid or mixed-lineage leukemia translocated to 2 homolog isoform 2 protein_id : NP_598680.3

name	Aff1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124248529 GeneID:17355 MGI:1100819
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence TAS] GO_process : GO:0006350 - transcription [Evidence TAS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; robotic; homolog of human MLLT2 unidentified product : myeloid/lymphoid or mixed-lineage leukemia translocated to 2 homolog isoform 1 protein_id : NP_001074267.1

name	Klhl8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520181 CCDS:CCDS19479.1 GeneID:246293 MGI:2179430
definition	codon_start : 1 product : kelch-like 8 protein_id : NP_848856.1

name	Hsd17b13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37574136 CCDS:CCDS19480.1 GeneID:243168 MGI:2140804
definition	GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : alcohol dehydrogenase PAN1B-like protein_id : NP_932147.1

name	Hsd17b11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716597 CCDS:CCDS19481.1 GeneID:114664 MGI:2149821
definition	GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA] codon_start : 1 note : retinal short-chain dehydrogenase/reductase SDR2; retinal short-chain dehydrogenase/reductase 2 product : dehydrogenase/reductase (SDR family) member 8 protein_id : NP_444492.1

name	Nudt9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27753998 CCDS:CCDS19482.1 GeneID:74167 MGI:1921417
definition	GO_component : GO:0005739 - mitochondrion [Evidence TAS] GO_function : GO:0047631 - ADP-ribose diphosphatase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0017110 - nucleoside-diphosphatase activity [Evidence IDA] GO_process : GO:0046032 - ADP catabolism [Evidence IDA]; GO:0046709 - IDP catabolism [Evidence IDA] codon_start : 1 product : nudix (nucleoside diphosphate linked moiety X)-type motif 9 protein_id : NP_083070.2

name	Sparcl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982800 CCDS:CCDS19483.1 GeneID:13602 MGI:108110
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : extracellular matrix protein 2 product : SPARC-like 1 (mast9, hevin) protein_id : NP_034227.2

name	Dspp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111120322 GeneID:666279 MGI:109172
definition	codon_start : 1 product : dentin sialophosphoprotein protein_id : NP_034210.2

name	Dmp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:88900499 CCDS:CCDS19484.1 GeneID:13406 MGI:94910
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_process : GO:0030198 - extracellular matrix organization and biogenesis [Evidence IEA]; GO:0001503 - ossification [Evidence IEA] codon_start : 1 note : serine rich acidic phosphoprotein product : dentin matrix protein 1 protein_id : NP_058059.2

name	LOC100041145 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254066 GeneID:100041145
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475927.1

name	Ibsp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680335 CCDS:CCDS19485.1 GeneID:15891 MGI:96389
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0001503 - ossification [Evidence IEA] codon_start : 1 exception : mismatches in translation function : possible involvement in mineralization and cell adhesion note : bone sialoprotein II product : integrin binding sialoprotein protein_id : NP_032344.1

name	Mepe (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716459 GeneID:94111 MGI:2137384
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0030502 - negative regulation of bone mineralization [Evidence IMP]; GO:0001501 - skeletal development [Evidence TAS] codon_start : 1 note : osteoregulin product : matrix extracellular phosphoglycoprotein with ASARM motif protein_id : NP_444402.1

name	Spp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678113 CCDS:CCDS19486.1 GeneID:20750 MGI:98389
definition	GO_component : GO:0045177 - apical part of cell [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence ISS]; GO:0005576 - extracellular region [Evidence NAS]; GO:0005615 - extracellular space [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence NAS] [Evidence IEA]; GO:0008083 - growth factor activity [Evidence ISS]; GO:0005178 - integrin binding [Evidence ISS]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence NAS]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0007160 - cell-matrix adhesion [Evidence ISS]; GO:0050930 - induction of positive chemotaxis [Evidence ISS]; GO:0030595 - leukocyte chemotaxis [Evidence ISS]; GO:0030502 - negative regulation of bone mineralization [Evidence ISS]; GO:0001503 - ossification [Evidence IEA]; GO:0042102 - positive regulation of T cell proliferation [Evidence ISS]; GO:0045637 - regulation of myeloid cell differentiation [Evidence ISS]; GO:0042088 - T-helper 1 type immune response [Evidence ISS] codon_start : 1 exception : mismatches in translation note : osteopontin; bone sialoprotein; 44 kDa bone phosphoprotein; 44kDa bone phosphoprotein product : secreted phosphoprotein 1 protein_id : NP_033289.1

name	Pkd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543487 CCDS:CCDS19487.1 GeneID:18764 MGI:1099818
definition	GO_component : GO:0005932 - basal body [Evidence ISS]; GO:0005929 - cilium [Evidence IDA]; GO:0005783 - endoplasmic reticulum [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence TAS]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006874 - calcium ion homeostasis [Evidence IMP]; GO:0006816 - calcium ion transport [Evidence IMP]; GO:0007050 - cell cycle arrest [Evidence IDA]; GO:0050974 - detection of mechanical stimulus during sensory perception [Evidence IMP]; GO:0007368 - determination of left/right symmetry [Evidence IMP]; GO:0007259 - JAK-STAT cascade [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : polycystin-2 product : polycystin 2 protein_id : NP_032887.2

name	BC005561 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254069 GeneID:243171 MGI:3040669
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475946.1

name	LOC100042165 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254139 GeneID:100042165
definition	codon_start : 1 product : similar to THO complex 2 protein_id : XP_001478330.1

name	LOC100041172 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254072 GeneID:100041172
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475967.1

name	D930016D06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254141 GeneID:100662 MGI:2442700
definition	codon_start : 1 product : hypothetical protein LOC100662 protein_id : XP_001478341.1

name	2310012P17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254080 GeneID:69623 MGI:1916873
definition	codon_start : 1 product : similar to CDNA sequence BC002059 protein_id : XP_001487846.1

name	LOC666563 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666563
definition	number : 1 pseudo : _no_value

name	LOC666563 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666563
definition	number : 2 pseudo : _no_value

name	LOC100041039 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041039
definition	number : 1 pseudo : _no_value

name	LOC100041039 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041039
definition	number : 2 pseudo : _no_value

name	LOC100041039 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041039
definition	number : 3 pseudo : _no_value

name	EG666629 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666629
definition	number : 1 pseudo : _no_value

name	EG666629 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666629
definition	number : 2 pseudo : _no_value

name	LOC100041136 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041136
definition	number : 11 pseudo : _no_value

name	LOC100041136 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041136
definition	number : 10 pseudo : _no_value

name	LOC100041136 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041136
definition	number : 9 pseudo : _no_value

name	LOC100041136 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041136
definition	number : 8 pseudo : _no_value

name	LOC100041136 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041136
definition	number : 7 pseudo : _no_value

name	LOC100041136 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041136
definition	number : 6 pseudo : _no_value

name	LOC100041136 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041136
definition	number : 5 pseudo : _no_value

name	LOC100041136 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041136
definition	number : 4 pseudo : _no_value

name	LOC100041136 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041136
definition	number : 3 pseudo : _no_value

name	LOC100041136 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041136
definition	number : 2 pseudo : _no_value

name	LOC100041136 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041136
definition	number : 1 pseudo : _no_value

name	LOC640963 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254142 GeneID:640963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 20 ESTs product : similar to STAT3-interacting protein as a repressor pseudo : _no_value transcript_id : XR_033637.1

clone name	MSMg01-125O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329A21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-353D03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-131D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515E18
singlet/doublet	doublet
plural/unique	plural

clone name	B6Ng01-253D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322E14
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-211J02.b	B6Ng01-211J02.g
ACC	GA029601	GA029602
length	1,125	1,108
definition	B6Ng01-211J02.b	B6Ng01-211J02.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(103,934,786 - 103,935,921)	(104,037,792 - 104,038,905)
sequence	gaattcttactagtctttagtttggggctgacgggttttcaactgtgctg tttctctacagatgaggtaatggacattagctaagcaaacagcagaagaa tcctatgttttaactagtgcacaaagaaagaggagaacagaaatgaatcc tgtttgtctcactgaatcctcacgaaaataagggctttatgtgtgataag ccaggcagaacagtctgtgtcactaatgtacacactatgtatatttgtgt atttcttctgtaaatattcatattttaggtaattttaaaatactctattc agtcttttgtgatcttgaaactgacagctgctaatgtatttcagtaattt taggattagatgacatctttaagtgcatctttattcaaacactgttttgg gctttaatagcatactcagtatcccagatctgactgatgactgagtttct gtcaattggagggcggttatttcctctcatggattttcacagttccggaa ttggcgtatggttatttccatggatttccacagttctggctagagatttt ctactgtttgttcacttaaaagagaaaaaaaaattcttggggctgaggat agtggtcaaccttaagtttgatccctggcacccccaaagaaaagtgattt aaatgactgaaacataaaaatgattttaaacaacctaacagaaatgaagt tgccacatttagtttgttctgttgctgttgcaaggaagattgctgaactg acaatccacacaggaatcttcaactgcagcgcttctctggtgcagagctg tcttcctgaaaggggtctttacctcagtcagctcctgaaaagcaccttag ctgatgttgggccattcagctcgcctgtggagtttgcaactacaaagagt ctgggcatattcgactctcagctcattgcccaaggcttacacaaataaat aaataaaagtgatttgccaaaagagatacctgatgcacttttttacagcc agctgttttgatctgggctctgacctaacataggattctccattgctcac ccagatttcagagagagaccagatacattgtagagttgttactggcctgg tgagatggctcagtggtaagagcac	cagccaaacaaagcgtctttaacttttcacttcactatgttggctgcaag caccttataaattataaattggagacaaatggacttgcttgacccaccct ccatgctcctgcttttacttcccttatctctcattttttccatcttcaag taagattcgttccattttctgcaatcaaaaaaaaaaaacagatgtaaaca aagtagaaatgagagaaatgcattattgaactcttcaccaaaagcaacct tttctgacatttgttttccattgagagtttttggtgctttctagtttgtt cagtttctggcccctgacttagtttcccattctcgtctcctccagtccaa tgcagaggattggcttgcagtacaagaagtgtctcctcagggggccaagc ttacactgtatctgcaacttttccttctgcctcttcctgttctgtagctg cagcctctgcacagctttctggagtcacttttgtcgctcagctgagtttt ttgtagcatcttctgggcctgaccattggtgggcattgttttctggtgag cgtgttattctcctaccccgagttcttggtcagggttcttggggtcctgt tcctcagggcatacacaggaggacccggctactgtcaaggaacacatcct tttagttgcctgagcctgttcttgtccttattcaaaggaaaagctcaagc atggttccctttgctactttgtaactcttgaatcctttcaccacccaggt gcaggaccatttccatagagactggcgctcagaacatccagctgtgcatc gccatgctgcagctgtccttctctgctgagtacctggtccagctgctaaa ctttgcattggcctatggacttcttcaagtgctgcacgggctgctcattg tcgcaggtgcatgaattccctctgcacaccagttaatgattaattatcaa gccagctttttggtactgctctgtgaatatatttttagcctgatactttg gggtactataatatataagccaggttcttggatcagtgggtgtttcacag aaattactttaaagccattgatggattttataaggcagaaccagtcactg tccacaaa
quality values	Open. Hide. 49 26 50 35 58 58 58 54 62 54 42 47 62 62 62 62 62 47 62 62 62 62 62 62 62 62 54 62 62 62 47 47 34 49 38 59 59 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 56 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 54 59 59 59 62 62 62 62 62 49 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 46 62 62 62 62 62 62 62 62 54 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 38 42 58 58 58 58 51 58 58 58 58 58 58 58 58 58 58 58 54 54 58 54 42 39 58 58 49 58 58 54 49 58 58 58 58 58 58 54 58 58 52 58 58 58 52 58 58 58 52 58 52 58 58 58 58 58 58 58 58 58 45 58 54 58 58 58 58 58 58 50 58 58 45 11 41 29 38 58 58 52 58 58 51 58 53 54 49 58 58 45 53 51 54 58 58 53 58 53 49 50 58 58 58 51 41 51 39 41 58 41 58 50 46 58 58 49 58 58 58 58 47 58 58 41 39 58 58 43 58 58 49 58 49 42 58 58 58 58 40 54 50 58 39 58 58 58 40 47 58 39 22 58 58 50 38 58 50 53 34 52 44 58 44 50 49 50 52 50 58 58 50 50 51 53 48 40 54 49 38 38 50 40 50 44 54 54 40 41 35 44 49 54 46 32 40 45 52 49 40 44 49 40 52 52 37 54 34 39 34 51 39 54 46 51 27 34 19 41 51 37 44 40 54 31 35 47 37 21 20 35 53 41 40 39 18 44 40 42 24 40 51 53 45 37 37 32 31 29 22 37 35 32 42 28 28 37 52 42 34 53 53 40 40 32 32 51 49 33 47 31 35 29 39 19 34 52 52 32 34 52 35 40 37 32 45 35 51 33 25 51 51 45 29 45 37 46 27 21 32 31 31 31 31 26 28 31 36 32 31 18 20 30 28 42 42 51 51 45 29 29 28 12 16 25 35 42 22 31 31 31 37 31 37 13 29 12 46 27 32 31 30 16 9 22 31 31 33 33 32 29 31 31 21 29 25 28 32 33 25 32 48 33 17 19 19 29 31 37 33 31 15 38 29 24 32 19 30 30 24 32 39 29 16 21 31 32 28 34 31 6 31 18 38 31 37 25 11 10 19 22 23 34 19 21 25 9 33 10 11 17 24 21 22 27 11 23 33 24 21 20 38 16 33 18 47 21 31 22 41 22 18 15 41 44 30 25 33 32 34 27 48 17 22 23 31 14 37 39 25 12 33 23 32 27 25 24 12 19 32 34 25 32 31 17 16 22 39 43 39 43 25 21 32 22 32 14 12 9 11 32 24 16 6 43 48 31 11 16 5 9 17 22 40 21 8 11 5 5 5 27 9 20 6 15 11 21 7 19 6 22 5 28 24 20 6 10 4 21 22 23 13 28 8 11 10 10 16 27 20 7 11 26 6 29 21 12 8 21 11 4 23 7 6 5 14 7 15 7 5 13 10 5 6 4 8 7 17 24 13 5 19 5 16 8 15 7 21 16 23 10 9 5 1 5 16 23 12 4 7 20 6 22 9 13 14 5 9 12 7 3 6 24 22 6 16 22 9 6 1 2 3 23	Open. Hide. 59 27 38 38 46 44 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 51 59 62 62 59 59 59 59 59 62 59 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 59 62 49 49 62 62 62 62 54 62 62 59 62 59 62 59 62 62 62 62 62 62 62 54 54 62 54 54 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 54 62 62 62 62 62 59 62 54 54 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 59 56 54 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 54 54 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 35 42 56 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 45 43 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 56 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 58 58 58 58 58 58 58 54 52 58 54 58 54 58 58 54 52 58 58 54 47 58 58 52 54 58 54 58 58 52 52 42 52 58 58 54 58 54 54 54 58 58 58 54 54 42 58 54 54 58 58 58 58 52 52 52 52 58 58 54 58 52 47 58 58 58 49 58 42 43 50 51 58 52 51 51 48 50 50 52 34 58 58 41 50 46 51 48 35 51 50 38 41 42 29 58 42 20 48 47 50 58 48 51 39 41 51 58 50 52 52 50 50 58 49 40 32 46 50 37 53 52 50 31 58 58 50 40 31 46 58 49 46 51 50 58 39 21 51 50 50 58 28 41 39 39 33 51 37 36 50 39 43 34 33 52 29 19 58 44 40 58 44 58 58 53 39 50 49 32 29 41 52 40 35 39 54 49 32 51 30 46 44 34 38 54 53 42 49 28 35 51 54 54 47 25 29 46 40 42 35 40 54 52 53 53 33 29 52 53 54 41 35 32 31 20 24 44 54 42 40 40 52 33 37 40 21 8 54 35 19 30 30 40 48 53 31 53 27 34 32 18 34 30 25 29 27 43 29 30 34 31 21 24 34 14 51 47 30 31 34 40 26 36 32 32 40 43 34 32 27 31 37 25 31 31 45 15 31 31 31 42 37 29 31 35 34 31 30 32 30 26 12 22 30 31 31 31 31 25 30 29 43 28 18 19 30 30 30 27 31 29 31 22 30 32 32 31 31 34 32 34 48 26 15 31 46 32 32 16 27 31 29 30 30 33 33 31 36 32 35 31 30 28 33 7 7 20 31 35 8 34 27 26 37 27 32 31 30 30 27 29 46 31 21 31 34 24 29 25 20 36 27 37 26 28 21 26 19 26 8 13 21 30 32 27 33 33 21 30 25 21 41 21 17 11 19 31 31 15 10 4 6 23 20 27 29 32 17 25 19 11 30 14 21 17 21 32 21 14 14 19 15 24 20 30 30 17 25 31 23 39 40 39 31 5 24 15 27 33 18 34 24 15 14 24 10 9 6 8 9 5 5 5 5 8 38 32 21 20 14 16 17 18 8 22 26 5 14 8 15 30 16 21 31 29 22 8 14 17 24 16 14 6 15 5 4 6 7 9 6 21 4 5 21 20 18 4 5 7 27 9 23 10 15 8 8 9 12 15 9 23 28 9 10 20 8 26 25 16 9 12 9 5 1 3 2 2 6 6 10 12 27 17 7 7 24 8 3 11 6 9 3 3 2 3 5 3 5 4 26 28 5 3 2 2 12 5 5 25 5 5 11 24 4 6 22 8 22 8 8 8 5 13 5 5 4 4 4 15 16 18

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_103934786_103935921
seq2: B6Ng01-211J02.b_44_1168

seq1  GAATTCTTACTAGTCTTTAGTTTGGGGCTGACGGGTTTTCAACTGTGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACTAGTCTTTAGTTTGGGGCTGACGGGTTTTCAACTGTGCTG  50

seq1  TTTCTCTACAGATGAGGTAATGGACATTAGCTAAGCAAACAGCAGAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTACAGATGAGGTAATGGACATTAGCTAAGCAAACAGCAGAAGAA  100

seq1  TCCTATGTTTTAACTAGTGCACAAAGAAAGAGGAGAACAGAAATGAATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATGTTTTAACTAGTGCACAAAGAAAGAGGAGAACAGAAATGAATCC  150

seq1  TGTTTGTCTCACTGAATCCTCACGAAAATAAGGGCTTTATGTGTGATAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTCTCACTGAATCCTCACGAAAATAAGGGCTTTATGTGTGATAAG  200

seq1  CCAGGCAGAACAGTCTGTGTCACTAATGTACACACTATGTATATTTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCAGAACAGTCTGTGTCACTAATGTACACACTATGTATATTTGTGT  250

seq1  ATTTCTTCTGTAAATATTCATATTTTAGGTAATTTTAAAATACTCTATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTCTGTAAATATTCATATTTTAGGTAATTTTAAAATACTCTATTC  300

seq1  AGTCTTTTGTGATCTTGAAACTGACAGCTGCTAATGTATTTCAGTAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTTGTGATCTTGAAACTGACAGCTGCTAATGTATTTCAGTAATTT  350

seq1  TAGGATTAGATGACATCTTTAAGTGCATCTTTATTCAAACACTGTTTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATTAGATGACATCTTTAAGTGCATCTTTATTCAAACACTGTTTTGG  400

seq1  GCTTTAATAGCATACTCAGTATCCCAGATCTGACTGATGACTGAGTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAATAGCATACTCAGTATCCCAGATCTGACTGATGACTGAGTTTCT  450

seq1  GTCAATTGGAGGGCGGTTATTTCCTCTCATGGATTTTCACAGTTCCGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATTGGAGGGCGGTTATTTCCTCTCATGGATTTTCACAGTTCCGGAA  500

seq1  TTGGCGTATGGTTATTTCCATGGATTTCCACAGTTCTGGCTAGAGATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCGTATGGTTATTTCCATGGATTTCCACAGTTCTGGCTAGAGATTTT  550

seq1  CTACTGTTTGTTCACTTAAAAGAGAAAAAAAAATTCTTGGGGCTGAGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTTTGTTCACTTAAAAGAGAAAAAAAAATTCTTGGGGCTGAGGAT  600

seq1  AGTGGTCAACCTTAAGTTTGATCCCTGGCACCCCCAAAGAAAAGTGATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCAACCTTAAGTTTGATCCCTGGCACCCCCAAAGAAAAGTGATTT  650

seq1  AAATGACTGAAACATAAAAATGATTTTAAACAACCTAACAGAAATGAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACTGAAACATAAAAATGATTTTAAACAACCTAACAGAAATGAAGT  700

seq1  TGCCACATTTAGTTTGTTCTGTTGCTGTTGCAAGGAAGATTGCTGAACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACATTTAGTTTGTTCTGTTGCTGTTGCAAGGAAGATTGCTGAACTG  750

seq1  ACAATCCACACAGGAATCTTCAACTGCAGCGCTTCTCTGGTGCAGAGCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCCACACAGGAATCTTCAACTGCAGCGCTTCTCTGGTGCAGAGCTG  800

seq1  TCTTCCTGAAAGGGGTCTTTACCTCAGTCAGCTCCTGAAAAGCACCTTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTGAAAGGGGTCTTTACCTCAGTCAGCTCCTGAAAAGCACCTTAG  850

seq1  CTGATGTT-GGCCATTCAGCTCGCCTGTGGAGTTTGCAACTACAAAGAGT  899
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGTTGGGCCATTCAGCTCGCCTGTGGAGTTTGCAACTACAAAGAGT  900

seq1  CTGGGCATATTCGACTCTCAGCTCATTGCCCAAGGCTTACACAAATAAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCATATTCGACTCTCAGCTCATTGCCCAAGGCTTACACAAATAAAT  950

seq1  AAATAAAAGTGATTTGCCAAAAGAGATACCTGATGCAC-TTTTTACAGCC  998
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAATAAAAGTGATTTGCCAAAAGAGATACCTGATGCACTTTTTTACAGCC  1000

seq1  AAGCTGTTTTGAATCTGGGCTTCTTGAACCTAAACATAGGATTCTTCCAT  1048
       |||||||||| |||||||| |||   |||| |||||||||||| |||||
seq2  -AGCTGTTTTG-ATCTGGGC-TCT--GACCT-AACATAGGATTC-TCCAT  1043

seq1  TGCTCACCCAGATTTCAGGAAGAGAGACCAGATACATTGTTAAGAGTTGT  1098
      ||||||||||||||||||  ||||||||||||||||||||  ||||||||
seq2  TGCTCACCCAGATTTCAG--AGAGAGACCAGATACATTGT--AGAGTTGT  1089

seq1  TACTGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCAC  1136
      |||| || |||||||||||||||||| |||||||||||
seq2  TACT-GGCCTGGTGAGATGGCTCAGT-GGTAAGAGCAC  1125

seq1: chr5_104037792_104038905
seq2: B6Ng01-211J02.g_80_1187 (reverse)

seq1  TTTGTG--CAGTGACTTGTTTCTG-CTTATAAAATCTCATCCAAATGGCT  47
      ||||||  ||||||| || ||||| ||||||||||| ||||  |||||| 
seq2  TTTGTGGACAGTGAC-TGGTTCTGCCTTATAAAATC-CATC--AATGGC-  45

seq1  TTTAAAGTATTTTCTGTGAAACACCCACTGAATCCAAGAACCCTGGCTTT  97
      ||||||||| |||||||||||||||||||| ||||||||| |||||| ||
seq2  TTTAAAGTAATTTCTGTGAAACACCCACTG-ATCCAAGAA-CCTGGC-TT  92

seq1  ATATATTATAGTCCCCAAAAGTATCAGGCTAAAAATATA-TCACAAGAGC  146
      |||||||||||| ||| |||||||||||||||||||||| |||| |||||
seq2  ATATATTATAGTACCCCAAAGTATCAGGCTAAAAATATATTCAC-AGAGC  141

seq1  AGTACCAAAAAGCTGGCTTGATAATTAATCAATTAACTGGTGTGCAGAGG  196
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGTACCAAAAAGCTGGCTTGATAATTAATC-ATTAACTGGTGTGCAGAGG  190

seq1  GAATTCATGCACCTGCGACAATGAGCAGCCCGTGCAGCACTTGGAAGAGT  246
      ||||||||||||||||||||||||||||||||||||||||||| |  |||
seq2  GAATTCATGCACCTGCGACAATGAGCAGCCCGTGCAGCACTTGAAGAAGT  240

seq1  CCATAGGCCAATGCAAAGTTTAGCAGCTGGACCAGGTACTCAGCAGAGAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGGCCAATGCAAAGTTTAGCAGCTGGACCAGGTACTCAGCAGAGAA  290

seq1  GGACAGCTGCAGCATGGCGATGCACAGCTGGATGTTCTGAGCGCCAGTCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCTGCAGCATGGCGATGCACAGCTGGATGTTCTGAGCGCCAGTCT  340

seq1  CTATGGAAATGGTCCTGCACCTGGGTGGTGAAAGGATTCAAGAGTTACAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGAAATGGTCCTGCACCTGGGTGGTGAAAGGATTCAAGAGTTACAA  390

seq1  AGTAGCAAAGGGAACCATGCTTGAGCTTTTCCTTTGAATAAGGACAAGAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCAAAGGGAACCATGCTTGAGCTTTTCCTTTGAATAAGGACAAGAA  440

seq1  CAGGCTCAGGCAACTAAAAGGATGTGTTCCTTGACAGTAGCCGGGTCCTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCAGGCAACTAAAAGGATGTGTTCCTTGACAGTAGCCGGGTCCTC  490

seq1  CTGTGTATGCCCTGAGGAACAGGACCCCAAGAACCCTGACCAAGAACTCG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTATGCCCTGAGGAACAGGACCCCAAGAACCCTGACCAAGAACTCG  540

seq1  GGGTAGGAGAATAACACGCTCACCAGAAAACAATGCCCACCAATGGTCAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGGAGAATAACACGCTCACCAGAAAACAATGCCCACCAATGGTCAG  590

seq1  GCCCAGAAGATGCTACAAAAAACTCAGCTGAGCGACAAAAGTGACTCCAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGAAGATGCTACAAAAAACTCAGCTGAGCGACAAAAGTGACTCCAG  640

seq1  AAAGCTGTGCAGAGGCTGCAGCTACAGAACAGGAAGAGGCAGAAGGAAAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGTGCAGAGGCTGCAGCTACAGAACAGGAAGAGGCAGAAGGAAAA  690

seq1  GTTGCAGATACAGTGTAAGCTTGGCCCCCTGAGGAGACACTTCTTGTACT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAGATACAGTGTAAGCTTGGCCCCCTGAGGAGACACTTCTTGTACT  740

seq1  GCAAGCCAATCCTCTGCATTGGACTGGAGGAGACGAGAATGGGAAACTAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCCAATCCTCTGCATTGGACTGGAGGAGACGAGAATGGGAAACTAA  790

seq1  GTCAGGGGCCAGAAACTGAACAAACTAGAAAGCACCAAAAACTCTCAATG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGGGCCAGAAACTGAACAAACTAGAAAGCACCAAAAACTCTCAATG  840

seq1  GAAAACAAATGTCAGAAAAGGTTGCTTTTGGTGAAGAGTTCAATAATGCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAAATGTCAGAAAAGGTTGCTTTTGGTGAAGAGTTCAATAATGCA  890

seq1  TTTCTCTCATTTCTACTTTGTTTACATCTGTTTTTTTTTTTTGATTGCAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTCATTTCTACTTTGTTTACATCTGTTTTTTTTTTTTGATTGCAG  940

seq1  AAAATGGAACGAATCTTACTTGAAGATGGAAAAAATGAGAGATAAGGGAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGAACGAATCTTACTTGAAGATGGAAAAAATGAGAGATAAGGGAA  990

seq1  GTAAAAGCAGGAGCATGGAGGGTGGGTCAAGCAAGTCCATTTGTCTCCAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGCAGGAGCATGGAGGGTGGGTCAAGCAAGTCCATTTGTCTCCAA  1040

seq1  TTTATAATTTATAAGGTGCTTGCAGCCAACATAGTGAAGTGAAAAGTTAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAATTTATAAGGTGCTTGCAGCCAACATAGTGAAGTGAAAAGTTAA  1090

seq1  AGACGCTTTGTTTGGCTG  1114
      ||||||||||||||||||
seq2  AGACGCTTTGTTTGGCTG  1108

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BAC

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Alignment Information