BAC Information

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BAC

Clone NameB6Ng01-212H02
Chromosome5 (Build37)
Map Location 89,867,424 - 89,868,497
singlet/doubletsinglet
Overlap geneGc
Upstream geneAmbn, Enam, Igj, Crlz1, Rufy3, Grsf1, Mobkl1a, Dck, Mkrn1-ps1, Slc4a4
Downstream geneLOC622870, Npffr2, LOC631105, Adamts3, EG665733, Cox18, Ankrd17
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212H02.bB6Ng01-212H02.g
ACCGA030236GA030237
length1,0791,196
definitionB6Ng01-212H02.b B6Ng01-212H02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttttggataagttttgacagatttttattgtgtgctcaggcag
ctacaaagagaatggtggacctgtgcagttagttttcttctgagtcttac
taaaaataaaacttaggcttttaagctctgtagtgatgtttatagatatc
agcatgaatgctcttaggaaacaaatttatgttgccagaaacattttttt
gggagggcagtttgttaatatgtgaaatttcatcacataaagtctaactt
tacctgtaagtatgtgtgtgttgtttatgaaaattccatatcaaaaccag
tactttttgttaataaaaaacaaacagaaccatttatctttaaaataatt
aggataaagaaaacacttagctataatgctataaaatatgacattgcata
aatattgaaaagccaacacaatgcaatacttgaagataaaatatgatgca
ccctaggcaatgatgtgatacatacaactgacaatccagagccatcctat
tggacatcatgtatcattacagcaaagcatctgtgtacagaagtgcatgt
ttgtaatggaaagagagtacacagctaatggatctatgctaatgtcagca
agaccttggagaatgatcttcatctaatataactatctgaatctgcatct
acttgagaaaattatgcaaattgagaaagtagaaaaatcttatcaagttt
taatttgtttacaaatttaaaatacaatatattttaatatattagacaaa
gtatatgaatattaccaggcttgaatagtgtcagtactaataagatttta
tgctataaatgaattttaaattgtgttcaatttaaatattgtactgaaaa
ctgtaatcaaatgaactgtgtgtaagaaatggatactctgcccaatgcag
ggcttgggcatctgggagtcttgtcccttgtgtgtatgtgggattttgtg
actgggttagtggtctcaaattactgacctcccattaacctgcttccgca
tctgtgagacagagtggggaatgtatttattgttttgtaaggccatgtga
ggatgcctagaataatgcccatgaaaatg
gaattctcacctgagtaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcactccagtcagaatggctaagatcaaaaattccggtgacagc
agatgctggtgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtcaggcggttcctca
gaaaattggacatagtactaccggatgaccccgtaatacctctcctgggc
atatatccagaagatgccccaaccggtaagaaggacacttgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctattataaaaaatgaatttatgaaattcctagccaa
atggatggacctggggggcatcattctgagtgaggtaacccaatcacaaa
ggaactcgcacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaagataaaagatacaatttgctaaacgcatgaaattcaa
gaagaatgaagaccaaagtgtggacactttgccccttcttagaatgggaa
caaaacacccatggaaggagttacagagacaaaatttggagttgtgacga
aaggatggaccatctagtgattgtcatataccgggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttgctgaaa
ggactcagatatagctgtctcttgtgagacttatgccggggcctagcaaa
cacagaagtggatgctcacagtcacctaaatgggatggatcacagggcac
ccaaatgggaggagctaggagaaagtagcccaggagctaaagggatctgc
aacctatagtggaacaacattatgactaaccagtacccggagctcttgat
tctaagcttgcatatgtatcaaaagaatggcctagttcggccattcactg
ggaaagagagggccatgcactcagcgcaatggtagccaagttcaggggga
cgctaggtcaatagatggcggcactacgtgggcgctggtgatttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_89867424_89868497
seq2: B6Ng01-212H02.b_42_1120

seq1  GAATTCTTTTTGGATAAGTTTTGACAGATTTTTATTGTGTGCTCAGGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTGGATAAGTTTTGACAGATTTTTATTGTGTGCTCAGGCAG  50

seq1  CTACAAAGAGAATGGTGGACCTGTGCAGTTAGTTTTCTTCTGAGTCTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAAGAGAATGGTGGACCTGTGCAGTTAGTTTTCTTCTGAGTCTTAC  100

seq1  TAAAAATAAAACTTAGGCTTTTAAGCTCTGTAGTGATGTTTATAGATATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATAAAACTTAGGCTTTTAAGCTCTGTAGTGATGTTTATAGATATC  150

seq1  AGCATGAATGCTCTTAGGAAACAAATTTATGTTGCCAGAAACATTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGAATGCTCTTAGGAAACAAATTTATGTTGCCAGAAACATTTTTTT  200

seq1  GGGAGGGCAGTTTGTTAATATGTGAAATTTCATCACATAAAGTCTAACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGCAGTTTGTTAATATGTGAAATTTCATCACATAAAGTCTAACTT  250

seq1  TACCTGTAAGTATGTGTGTGTTGTTTATGAAAATTCCATATCAAAACCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGTAAGTATGTGTGTGTTGTTTATGAAAATTCCATATCAAAACCAG  300

seq1  TACTTTTTGTTAATAAAAAACAAACAGAACCATTTATCTTTAAAATAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTTGTTAATAAAAAACAAACAGAACCATTTATCTTTAAAATAATT  350

seq1  AGGATAAAGAAAACACTTAGCTATAATGCTATAAAATATGACATTGCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAAAGAAAACACTTAGCTATAATGCTATAAAATATGACATTGCATA  400

seq1  AATATTGAAAAGCCAACACAATGCAATACTTGAAGATAAAATATGATGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGAAAAGCCAACACAATGCAATACTTGAAGATAAAATATGATGCA  450

seq1  CCCTAGGCAATGATGTGATACATACAACTGACAATCCAGAGCCATCCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGGCAATGATGTGATACATACAACTGACAATCCAGAGCCATCCTAT  500

seq1  TGGACATCATGTATCATTACAGCAAAGCATCTGTGTACAGAAGTGCATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACATCATGTATCATTACAGCAAAGCATCTGTGTACAGAAGTGCATGT  550

seq1  TTGTAATGGAAAGAGAGTACACAGCTAATGGATCTATGCTAATGTCAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATGGAAAGAGAGTACACAGCTAATGGATCTATGCTAATGTCAGCA  600

seq1  AGACCTTGGAGAATGATCTTCATCTAATATAACTATCTGAATCTGCATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTTGGAGAATGATCTTCATCTAATATAACTATCTGAATCTGCATCT  650

seq1  ACTTGAGAAAATTATGCAAATTGAGAAAGTAGAAAAATCTTATCAAGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAGAAAATTATGCAAATTGAGAAAGTAGAAAAATCTTATCAAGTTT  700

seq1  TAATTTGTTTACAAATTTAAAATACAATATATTTTAATATATTAGACAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGTTTACAAATTTAAAATACAATATATTTTAATATATTAGACAAA  750

seq1  GTATATGAATATTACCAGGCTTGAATAGTGTCAGTACTAATAAGATTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATGAATATTACCAGGCTTGAATAGTGTCAGTACTAATAAGATTTTA  800

seq1  TGCTATAAATGAATTTTAAATTGTGTTCAATTTAAATATTGTACTGAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATAAATGAATTTTAAATTGTGTTCAATTTAAATATTGTACTGAAAA  850

seq1  CTGTAATCAAATGAACTGTGTGTAAGAAATGGATACTCTGCCCAATGCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAATCAAATGAACTGTGTGTAAGAAATGGATACTCTGCCCAATGCAG  900

seq1  GGCTTGGGCATCTGGGAGTCTTGT-CCTTGTGTGTATGT-GGATTTTGTG  948
      |||||||||||||||||||||||| |||||||||||||| ||||||||||
seq2  GGCTTGGGCATCTGGGAGTCTTGTCCCTTGTGTGTATGTGGGATTTTGTG  950

seq1  ACTGGTTTAGTGGTCTCAAATTACTGACCT-CCATTAACCTGCTTCCGCA  997
      ||||| |||||||||||||||||||||||| |||||||||||||||||||
seq2  ACTGGGTTAGTGGTCTCAAATTACTGACCTCCCATTAACCTGCTTCCGCA  1000

seq1  TCTGTGAGACAGAGTGGGGAATGTATTTATTG-TTTGTAAAGGCATGTGA  1046
      |||||||||||||||||||||||||||||||| ||||||| | |||||||
seq2  TCTGTGAGACAGAGTGGGGAATGTATTTATTGTTTTGTAAGGCCATGTGA  1050

seq1  GGATG-CTAGAATAATGCCCATGAAAATG  1074
      ||||| |||||||||||||||||||||||
seq2  GGATGCCTAGAATAATGCCCATGAAAATG  1079