BAC Information

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BAC

Clone NameB6Ng01-214I04
Chromosome5 (Build37)
Map Location 7,777,891 - 7,996,621
singlet/doubletdoublet
Overlap geneLOC667767, EG546855, Steap4
Upstream geneLOC100042651, 4921511H03Rik, LOC242823
Downstream geneSri, LOC433840, Adam22, Dbf4, Slc25a40, Gm440, Abcb1a, EG330031, Abcb1b, Abcb4, Crot
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214I04.bB6Ng01-214I04.g
ACCGA031739GA031740
length732729
definitionB6Ng01-214I04.b B6Ng01-214I04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,777,891 - 7,778,622)(7,995,946 - 7,996,621)
sequence
gaattctattgcaactttgaagctatgtgaagagttgcagaaaaaagttt
aggactaaaaaaagtacaggagagcaattgtgatgtccttggccttcttc
agcccagcctggtgaacagagcatttgctctttacctgcacaacctatcc
tgcctgatgtgctgtccccattgttctctgggtatcaccatctagctctg
ggcagataaagaatacacgagtgaatttaatgcacacacgtgctctactg
tgaccaaaaacgttattcaaaagaatttaaatggcctgaagtccagataa
aataattgtcaattcttcatgaatctcaaagcctatatatatatatatat
atatatatatatatatatatatatacacacacacacatatttttgcagaa
cagacagtgactatgttagcacgttatcaaatttaagaaacccctttgcc
catttacaaacttctcagcagtccatgggcacaactttatacagcataca
cacacacacacacacacacacacctgaagattatctttttttgtcaaaga
aaatcaataacactgtgttgaaataagcaactccacatcatacctgccaa
tccaatagctcgtcatttcagagactgtagacacatgtaagttgtatcac
aaaggaaagaatattgtacttataagggctcagtttctatttaagtctta
aatttaccctgaggggtgtggtggtggtggtg
gaattcatgctgtaaagtcccagcacagacctgagtaaggaagagagagg
cttggtgatgacagaacagggtatgtctgtcacatgattcaggtaggaag
gggatgctggttggggtcctggtataattgaggagaaattgacaatgatt
atcgttttaaaaattaaattagatatgcatgctactaaagacaatcgtga
actggtatcaccttcatcgacacagggcagcacgttctattctagtatgt
agatgcaggcaggaacagacagcgcttaggcaactgagaggctcagctgg
tgaagccaggacatgagtttgagccccagaacccaccaaagaatggatgg
tgggcagagcgaactgattccagatcacgtatgcttcctctctctacccc
cgcgtcacagaaaagcaaatgtgggttattctcactggaaagcatggatt
catctatcgctgtgtatagacgacatgaccgaggtatatataaatccctg
aagattcagttaagacatcgttaaaattggtaaattcagttatattacag
aatataagatcaacacataacagttagtagaatttctactacacaactga
aaaataaatcaaaactaactaagcaaagtatttgggataaatttattcaa
aaaggtgaaaagaactttgtaatgaaactataaagtactgatgaaaagat
ttgaagaggacacacacacatacacactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_7777891_7778622
seq2: B6Ng01-214I04.b_44_775

seq1  GAATTCTATTGCAACTTTGAAGCTATGTGAAGAGTTGCAGAAAAAAGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTGCAACTTTGAAGCTATGTGAAGAGTTGCAGAAAAAAGTTT  50

seq1  AGGACTAAAAAAAGTACAGGAGAGCAATTGTGATGTCCTTGGCCTTCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTAAAAAAAGTACAGGAGAGCAATTGTGATGTCCTTGGCCTTCTTC  100

seq1  AGCCCAGCCTGGTGAACAGAGCATTTGCTCTTTACCTGCACAACCTATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGCCTGGTGAACAGAGCATTTGCTCTTTACCTGCACAACCTATCC  150

seq1  TGCCTGATGTGCTGTCCCCATTGTTCTCTGGGTATCACCATCTAGCTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGATGTGCTGTCCCCATTGTTCTCTGGGTATCACCATCTAGCTCTG  200

seq1  GGCAGATAAAGAATACACGAGTGAATTTAATGCACACACGTGCTCTACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGATAAAGAATACACGAGTGAATTTAATGCACACACGTGCTCTACTG  250

seq1  TGACCAAAAACGTTATTCAAAAGAATTTAAATGGCCTGAAGTCCAGATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAAAAACGTTATTCAAAAGAATTTAAATGGCCTGAAGTCCAGATAA  300

seq1  AATAATTGTCAATTCTTCATGAATCTCAAAGCCTATATATATATATATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTGTCAATTCTTCATGAATCTCAAAGCCTATATATATATATATAT  350

seq1  ATATATATATATATATATATATATACACACACACACATATTTTTGCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATACACACACACACATATTTTTGCAGAA  400

seq1  CAGACAGTGACTATGTTAGCACGTTATCAAATTTAAGAAACCCCTTTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGTGACTATGTTAGCACGTTATCAAATTTAAGAAACCCCTTTGCC  450

seq1  CATTTACAAACTTCTCAGCAGTCCATGGGCACAACTTTATACAGCATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACAAACTTCTCAGCAGTCCATGGGCACAACTTTATACAGCATACA  500

seq1  CACACACACACACACACACACACCTGAAGATTATCTTTTTTTGTCAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACCTGAAGATTATCTTTTTTTGTCAAAGA  550

seq1  AAATCAATAACACTGTGTTGAAATAAGCAACTCCACATCATACCTGCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAATAACACTGTGTTGAAATAAGCAACTCCACATCATACCTGCCAA  600

seq1  TCCAATAGCTCGTCATTTCAGAGACTGTAGACACATGTAAGTTGTATCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATAGCTCGTCATTTCAGAGACTGTAGACACATGTAAGTTGTATCAC  650

seq1  AAAGGAAAGAATATTGTACTTATAAGGGCTCAGTTTCTATTTAAGTCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAAGAATATTGTACTTATAAGGGCTCAGTTTCTATTTAAGTCTTA  700

seq1  AATTTACCCTGAGGGGTGTGGTGGTGGTGGTG  732
      ||||||||||||||||||||||||||||||||
seq2  AATTTACCCTGAGGGGTGTGGTGGTGGTGGTG  732

seq1: chr5_7995946_7996621
seq2: B6Ng01-214I04.g_68_743 (reverse)

seq1  TTCATTACAAAGTTCTTTTCACCTTTTTGAATAAATTTATCCCAAATACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTACAAAGTTCTTTTCACCTTTTTGAATAAATTTATCCCAAATACT  50

seq1  TTGCTTAGTTAGTTTTGATTTATTTTTCAGTTGTGTAGTAGAAATTCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTAGTTAGTTTTGATTTATTTTTCAGTTGTGTAGTAGAAATTCTAC  100

seq1  TAACTGTTATGTGTTGATCTTATATTCTGTAATATAACTGAATTTACCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGTTATGTGTTGATCTTATATTCTGTAATATAACTGAATTTACCAA  150

seq1  TTTTAACGATGTCTTAACTGAATCTTCAGGGATTTATATATACCTCGGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACGATGTCTTAACTGAATCTTCAGGGATTTATATATACCTCGGTC  200

seq1  ATGTCGTCTATACACAGCGATAGATGAATCCATGCTTTCCAGTGAGAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCGTCTATACACAGCGATAGATGAATCCATGCTTTCCAGTGAGAATA  250

seq1  ACCCACATTTGCTTTTCTGTGACGCGGGGGTAGAGAGAGGAAGCATACGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACATTTGCTTTTCTGTGACGCGGGGGTAGAGAGAGGAAGCATACGT  300

seq1  GATCTGGAATCAGTTCGCTCTGCCCACCATCCATTCTTTGGTGGGTTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGGAATCAGTTCGCTCTGCCCACCATCCATTCTTTGGTGGGTTCTG  350

seq1  GGGCTCAAACTCATGTCCTGGCTTCACCAGCTGAGCCTCTCAGTTGCCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCAAACTCATGTCCTGGCTTCACCAGCTGAGCCTCTCAGTTGCCTA  400

seq1  AGCGCTGTCTGTTCCTGCCTGCATCTACATACTAGAATAGAACGTGCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCTGTCTGTTCCTGCCTGCATCTACATACTAGAATAGAACGTGCTGC  450

seq1  CCTGTGTCGATGAAGGTGATACCAGTTCACGATTGTCTTTAGTAGCATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTCGATGAAGGTGATACCAGTTCACGATTGTCTTTAGTAGCATGC  500

seq1  ATATCTAATTTAATTTTTAAAACGATAATCATTGTCAATTTCTCCTCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTAATTTAATTTTTAAAACGATAATCATTGTCAATTTCTCCTCAAT  550

seq1  TATACCAGGACCCCAACCAGCATCCCCTTCCTACCTGAATCATGTGACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCAGGACCCCAACCAGCATCCCCTTCCTACCTGAATCATGTGACAG  600

seq1  ACATACCCTGTTCTGTCATCACCAAGCCTCTCTCTTCCTTACTCAGGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACCCTGTTCTGTCATCACCAAGCCTCTCTCTTCCTTACTCAGGTCT  650

seq1  GTGCTGGGACTTTACAGCATGAATTC  676
      ||||||||||||||||||||||||||
seq2  GTGCTGGGACTTTACAGCATGAATTC  676