BAC Information

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BAC

Clone NameB6Ng01-215L16
Chromosome5 (Build37)
Map Location 35,302,509 - 35,457,372
singlet/doubletdoublet
Overlap geneRgs12, Hgfac, Dok7, Lrpap1
Upstream geneGm1673, LOC100040427, Nat8l, Poln, BC023882, Mxd4, Zfyve28, EG433874, A830049F12Rik, LOC100040061, Rnf4, BC037112, LOC100040480, Tnip2, Sh3bp2, Add1, 0610009O03Rik, Nol14, Gprk2l, Hdh, A930005I04Rik
Downstream geneAdra2c, Hmx1, Cpz, Plk-ps1, 2310079F23Rik, Acox3, Htra3, Sh3tc1, Ablim2, Afap1, LOC100040209, Sorcs2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215L16.bB6Ng01-215L16.g
ACCGA032611GA032612
length740268
definitionB6Ng01-215L16.b B6Ng01-215L16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,302,509 - 35,303,248)(35,457,105 - 35,457,372)
sequence
gaattctctcttcacatacaacctacaatttaagttggacaaccccaaac
atactcttgaggtaggggttctcctgaacccttgcagacaaacccagctc
ctatttcctcctgtgtagctgagggcagggcctccaagcctccctggctg
cctctgctccactctatgctgtggtcactgtccagcccaggtttgggggt
caggagagtatctcttgtgatggtctgttattgtttggatacgtttatct
tgaggtggcaccttctgttatctgcatgtccttgacagggttttggggtg
ctctgttaggggccctctaacatctggagaggtagctctgtccttgaggg
tgtttggcctctggggctgtggtattgggcttgcttgcaggagataagca
ggtagaaaagcccagagtggataaccttggggctgaggagacagatgggc
ccatccttagaggagcaagggtgtaaaaggagaggctgcacaagagggag
gccagccatgagctggagccagaagggaagggagggccaggtttcagagg
tctaggagcaccgtgaggggaccaaaggaacactgacttgagaggggacc
caggtggatgggatgctttgtagcagaaatggtatcagaaagccttgtga
ctaggaaagggtggtggggacagcttgaggccttcggtctcctaaggagg
ctgctgcatgtatacgggaagagaggagggaaggggaggg
caggacagtcagggttatttagagagaacctgtctcaaacagccataaat
tttaaaaaattacataaataaataattgcaagaaacaggaacaactagaa
gggaaaatgctgataacatcaagtgtattcaaatgtctaggctgagggta
aagcccctcacttgtgtggggctcaggcccagtctgctgctttgcagaga
aagagagagagagagagagagagagagagagagagagagagagagagaga
gagagggagagagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_35302509_35303248
seq2: B6Ng01-215L16.b_46_785

seq1  GAATTCTCTCTTCACATACAACCTACAATTTAAGTTGGACAACCCCAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTTCACATACAACCTACAATTTAAGTTGGACAACCCCAAAC  50

seq1  ATACTCTTGAGGTAGGGGTTCTCCTGAACCCTTGCAGACAAACCCAGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCTTGAGGTAGGGGTTCTCCTGAACCCTTGCAGACAAACCCAGCTC  100

seq1  CTATTTCCTCCTGTGTAGCTGAGGGCAGGGCCTCCAAGCCTCCCTGGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCCTCCTGTGTAGCTGAGGGCAGGGCCTCCAAGCCTCCCTGGCTG  150

seq1  CCTCTGCTCCACTCTATGCTGTGGTCACTGTCCAGCCCAGGTTTGGGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCTCCACTCTATGCTGTGGTCACTGTCCAGCCCAGGTTTGGGGGT  200

seq1  CAGGAGAGTATCTCTTGTGATGGTCTGTTATTGTTTGGATACGTTTATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAGTATCTCTTGTGATGGTCTGTTATTGTTTGGATACGTTTATCT  250

seq1  TGAGGTGGCACCTTCTGTTATCTGCATGTCCTTGACAGGGTTTTGGGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTGGCACCTTCTGTTATCTGCATGTCCTTGACAGGGTTTTGGGGTG  300

seq1  CTCTGTTAGGGGCCCTCTAACATCTGGAGAGGTAGCTCTGTCCTTGAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTAGGGGCCCTCTAACATCTGGAGAGGTAGCTCTGTCCTTGAGGG  350

seq1  TGTTTGGCCTCTGGGGCTGTGGTATTGGGCTTGCTTGCAGGAGATAAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGCCTCTGGGGCTGTGGTATTGGGCTTGCTTGCAGGAGATAAGCA  400

seq1  GGTAGAAAAGCCCAGAGTGGATAACCTTGGGGCTGAGGAGACAGATGGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAAAAGCCCAGAGTGGATAACCTTGGGGCTGAGGAGACAGATGGGC  450

seq1  CCATCCTTAGAGGAGCAAGGGTGTAAAAGGAGAGGCTGCACAAGAGGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCTTAGAGGAGCAAGGGTGTAAAAGGAGAGGCTGCACAAGAGGGAG  500

seq1  GCCAGCCATGAGCTGGAGCCAGAAGGGAAGGGAGGGCCAGGTTTCAGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCATGAGCTGGAGCCAGAAGGGAAGGGAGGGCCAGGTTTCAGAGG  550

seq1  TCTAGGAGCACCGTGAGGGGACCAAAGGAACACTGACTTGAGAGGGGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGAGCACCGTGAGGGGACCAAAGGAACACTGACTTGAGAGGGGACC  600

seq1  CAGGTGGATGGGATGCTTTGTAGCAGAAATGGTATCAGAAAGCCTTGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGATGGGATGCTTTGTAGCAGAAATGGTATCAGAAAGCCTTGTGA  650

seq1  CTAGGAAAGGGTGGTGGGGACAGCTTGAGGCCTTCGGTCTCCTAAGGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAAAGGGTGGTGGGGACAGCTTGAGGCCTTCGGTCTCCTAAGGAGG  700

seq1  CTGCTGCATGTATACGGGAAGAGAGGAGGGAAGGGGAGGG  740
      ||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCATGTATACGGGAAGAGAGGAGGGAAGGGGAGGG  740

seq1: chr5_35457105_35457372
seq2: B6Ng01-215L16.g_73_340 (reverse)

seq1  TCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  50

seq1  TCTCTCTCTCTCTCTCTTTCTCTGCAAAGCAGCAGACTGGGCCTGAGCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTTTCTCTGCAAAGCAGCAGACTGGGCCTGAGCCC  100

seq1  CACACAAGTGAGGGGCTTTACCCTCAGCCTAGACATTTGAATACACTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAGTGAGGGGCTTTACCCTCAGCCTAGACATTTGAATACACTTGA  150

seq1  TGTTATCAGCATTTTCCCTTCTAGTTGTTCCTGTTTCTTGCAATTATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATCAGCATTTTCCCTTCTAGTTGTTCCTGTTTCTTGCAATTATTTA  200

seq1  TTTATGTAATTTTTTAAAATTTATGGCTGTTTGAGACAGGTTCTCTCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTAATTTTTTAAAATTTATGGCTGTTTGAGACAGGTTCTCTCTAA  250

seq1  ATAACCCTGACTGTCCTG  268
      ||||||||||||||||||
seq2  ATAACCCTGACTGTCCTG  268