BAC Information

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BAC

Clone NameB6Ng01-217N01
Chromosome5 (Build37)
Map Location 7,594,687 - 7,595,776
singlet/doubletsinglet
Overlap genenone
Upstream geneEG435830, LOC100042651, 4921511H03Rik, LOC242823
Downstream geneLOC667767, EG546855, Steap4, Sri, LOC433840, Adam22, Dbf4, Slc25a40, Gm440
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217N01.bB6Ng01-217N01.g
ACCGA034114GA034115
length1,0411,086
definitionB6Ng01-217N01.b B6Ng01-217N01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccagtttttaatggggttatttgatt
ttctgaagtccaccctcttgagttctttatatatgttggatattagtccc
ctaactgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattaacggtgtcttttgccttgcagaaactgtggagtttca
tgaggtcccatttgtcaattctcgatcttacaccacaagtcattgctgtt
atattcaggaatttttcccctgtgcccacatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctgttttttttttttttttgtgaa
gttccttgatccacttacatttgaccttagtacaaggagataggtatgga
tctattcgcattcttctacatgataacaaccagttgtgccagcaccaatt
gttgaaaatgctgtctttcttccactggatggttttagctcccttgtcga
agatcaagtgaccataggtgtgtgggtttatttctgggtcttcaattcta
ttccattggtctacttgtctgtcagtataccagtaagatgcagtttttat
cataattgctctgtagtaaagctttaggtcaggtacggtgattccaccag
aggttcttttatctttgagaagagtttttgctatcctagattttttgtta
ttccagatgaatttgcagattactctttttaattcgttgaagaattgagt
tggaattttgatggggattgcattgaatctgtagattgcttttggcaaga
tagccatttttacaatgttgatcctgccaatccatgagcatgggagatct
ttccatcttctgagatcttctttatttctttctttagagacttgaagttt
tattcatacagatctttcacttccttagtagagtcacgccagatatttta
tatatttatgactatgagacggtgttggttccctatttctttctcagctg
ttattccttgtgagaagaagccaatgactgctgagttaact
gaattccaacaaagcatatggatctagacacaaaatatgtctgtatcctc
aaactctcctgcacatctatttgcctgtttctcttccccctaaagatgac
aaagccttctctgctcaggctttacactaacgacccacctcctcctgggc
ccacaagcactgcctgccttcctgctcctcgtttcagttccacatcgttc
tcatatttgaaactcttgctcttaaccttctccccactttgaagaaatag
tgggaggtaaagaaatgaaaggttagggtgtttgattggaaaaaaatctc
atcaatgaattattttgaaactaacaactgttatggaatgagtagtaata
aaaaaagacagtaaaggaggaattaaattcttcaaaaacaaggggatgca
ttgctggaaaatgaagaaagatggaacacactgtaatggcaggcagaagg
ttaagccatgaatgaatgtgtgttgataattgaagaccccagtgtttcaa
acccaggcaaacagcaaagcctcccctgtgtgaagctctcccggggataa
tggaaaagctttctggtgtgtctgtggatcctgaaagtatcacccacagc
tacctcctcccagatgactgatacctgacactgctcaaccacatagagct
cgaaacaacctgacactttggagagcactagggacagtctttgcatttcc
tctgctatggtctcttatatgatattgcctagatagtttcactgttatgt
gtctaaaagatacagtctctattacaaatatagatatctttcctgaaacc
cagactcctgtatccaactaccagctatcacctcaaatggatactactga
aaatcaaaatttgaatactgtcaccttacacttaatctttcccataattt
tccacattaagaattggcaacttattcaattactcacacacacacacaca
ctcacacacacgcacacacaccacactcagacgcacatttttacttcaca
aatatcttatacattatcctatagatctgctttttttattatatccagaa
tccaatttccacagtatgatactactgatcctagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_7594687_7595776
seq2: B6Ng01-217N01.g_67_1152

seq1  GAATTCCAACAAAGCATATGGATCTAGACACAAAATATGTCTGTATCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACAAAGCATATGGATCTAGACACAAAATATGTCTGTATCCTC  50

seq1  AAACTCTCCTGCACATCTATTTGCCTGTTTCTCTTCCCCCTAAAGATGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTCCTGCACATCTATTTGCCTGTTTCTCTTCCCCCTAAAGATGAC  100

seq1  AAAGCCTTCTCTGCTCAGGCTTTACACTAACGACCCACCTCCTCCTGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTTCTCTGCTCAGGCTTTACACTAACGACCCACCTCCTCCTGGGC  150

seq1  CCACAAGCACTGCCTGCCTTCCTGCTCCTCGTTTCAGTTCCACATCGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAGCACTGCCTGCCTTCCTGCTCCTCGTTTCAGTTCCACATCGTTC  200

seq1  TCATATTTGAAACTCTTGCTCTTAACCTTCTCCCCACTTTGAAGAAATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTTGAAACTCTTGCTCTTAACCTTCTCCCCACTTTGAAGAAATAG  250

seq1  TGGGAGGTAAAGAAATGAAAGGTTAGGGTGTTTGATTGGAAAAAAATCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGTAAAGAAATGAAAGGTTAGGGTGTTTGATTGGAAAAAAATCTC  300

seq1  ATCAATGAATTATTTTGAAACTAACAACTGTTATGGAATGAGTAGTAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATGAATTATTTTGAAACTAACAACTGTTATGGAATGAGTAGTAATA  350

seq1  AAAAAAGACAGTAAAGGAGGAATTAAATTCTTCAAAAACAAGGGGATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGACAGTAAAGGAGGAATTAAATTCTTCAAAAACAAGGGGATGCA  400

seq1  TTGCTGGAAAATGAAGAAAGATGGAACACACTGTAATGGCAGGCAGAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGAAAATGAAGAAAGATGGAACACACTGTAATGGCAGGCAGAAGG  450

seq1  TTAAGCCATGAATGAATGTGTGTTGATAATTGAAGACCCCAGTGTTTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCCATGAATGAATGTGTGTTGATAATTGAAGACCCCAGTGTTTCAA  500

seq1  ACCCAGGCAAACAGCAAAGCCTCCCCTGTGTGAAGCTCTCCCGGGGATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGCAAACAGCAAAGCCTCCCCTGTGTGAAGCTCTCCCGGGGATAA  550

seq1  TGGAAAAGCTTTCTGGTGTGTCTGTGGATCCTGAAAGTATCACCCACAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAGCTTTCTGGTGTGTCTGTGGATCCTGAAAGTATCACCCACAGC  600

seq1  TACCTCCTCCCAGATGACTGATACCTGACACTGCTCAACCACATAGAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCTCCCAGATGACTGATACCTGACACTGCTCAACCACATAGAGCT  650

seq1  CGAAACAACCTGACACTTTGGAGAGCACTAGGGACAGTCTTTGCATTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAACAACCTGACACTTTGGAGAGCACTAGGGACAGTCTTTGCATTTCC  700

seq1  TCTGCTATGGTCTCTTATATGATATTGCCTAGATAGTTTCACTGTTATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTATGGTCTCTTATATGATATTGCCTAGATAGTTTCACTGTTATGT  750

seq1  GTCTAAAAGATACAGTCTCTATTACAAATATAGATATCTTTCCTGAAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAAAGATACAGTCTCTATTACAAATATAGATATCTTTCCTGAAACC  800

seq1  CAGACTCCTGTATCCAACTACCAGCTATCACCTCAAATGGATACTACTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTCCTGTATCCAACTACCAGCTATCACCTCAAATGGATACTACTGA  850

seq1  AAATCAAAATTTGAATACTGTCACCTTACACTTAATC-TTCCCATAATTT  899
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAATCAAAATTTGAATACTGTCACCTTACACTTAATCTTTCCCATAATTT  900

seq1  TCCACATAAAGAATTGGCAACTTA-TCAATTACTCAACACACACACACAC  948
      ||||||| |||||||||||||||| |||||||||| ||||||||||||||
seq2  TCCACATTAAGAATTGGCAACTTATTCAATTACTC-ACACACACACACAC  949

seq1  ACACACACACACACACACACACACACACACAGACGGCACATTTTTACTTC  998
      || ||||||||| ||||||||| ||||| ||||| |||||||||||||||
seq2  ACTCACACACACGCACACACAC-CACACTCAGAC-GCACATTTTTACTTC  997

seq1  ACAAATATTCTATACATTAATCCTATAGAATCTGCTTTTTTTATTATATC  1048
      ||||||||  |||||||| ||||||||| |||||||||||||||||||||
seq2  ACAAATATCTTATACATT-ATCCTATAG-ATCTGCTTTTTTTATTATATC  1045

seq1  CAGAATCCAATTT-CACAGTATGAATACTACCTGATTCTAGCC  1090
      ||||||||||||| ||||||||| |||||| ||||| ||||||
seq2  CAGAATCCAATTTCCACAGTATG-ATACTA-CTGATCCTAGCC  1086