BAC Information

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BAC

Clone NameB6Ng01-218A02
Chromosome18 (Build37)5 (Build37)
Map Location 45,442,923 - 45,443,46380,372,040 - 80,372,101
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneMyot, Dcp2, Mcc, LOC100042883, Ythdc2, LOC626309, LOC225457
Downstream geneLOC100042900, Kcnn2, Trim36, LOC100042905, Pggt1b, Ccdc112
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218A02.bB6Ng01-218A02.g
ACCGA034249GA034250
length757397
definitionB6Ng01-218A02.b B6Ng01-218A02.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(45,442,923 - 45,443,463)(80,372,040 - 80,372,101)
sequence
gaattccaaaaatttaacaccaaagatcaccctgttttgttttgtttttt
aaaggcacctctcaaagaaagaaatacaaattattgatagatatgtgaat
aagtgttcaatatcttagccataagggaaatgcttgagattccatctcac
ctggggcagaatctatcatcaagaggagttgggagggtgaatataatcaa
aatacagtgtatgaaactctctaaaagttaataaaatatttttttaaaaa
ataaaatcacaacaaatcctgacaaagccatgaggggggggcaggggggg
catttttccataccaaataagaatgtgacattgtgaggctgccactgcag
acactaatatagtgatttgtcaaatatcaaataccaagaagagagctctc
attgggtctgtctcaacactgggtgtatacttgaaggattcaaatcagta
cactacagagatacctgcatatccacgctgatcctcacattattcacgat
agccaaggtatggaaccagcctagaggtcatcagatgaatgggtaaaggc
aacatggtccatatggaaagtggaattttattcatgtgtaaagtcgaata
aattatgaaaatttcaggaaagtgaatggaactattaaatcattgttaag
tgacaaaattccagactcaaaaaacaaatactctgtggtttctatactat
gtggaatctagatttaagtgtgtgtgtgtgcgtaaggcatgaaaagtata
aaatgaa

gaattctttgttcaggtctgtaccccatttttttattattttcttcattt
acatttcaaatgctatcctcttccccagtttcctctccaacagtcccctg
taccctcccctctctctgttcgccaacacacccactcctgcttcctggcc
ctggcattcatccattcttatctccttgtacaaactcaagtccacgtgga
tcagggacctccacataaaaccaggaatgatgaactaatagaagaaaaaa
tggaaaagaacctcaaacattggcacaggggaaaattttcctgaatagaa
catcaatggtttgtgctctaaaatcaacaactgacaaatgggaccacata
aaattgcaaagcttctgtaaggcaaaggacactgtcaataggacaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_45442923_45443463
seq2: B6Ng01-218A02.b_259_803 (reverse)

seq1  TTCATTTTATAC-TTTCATGCCTTACACACACACACACACTTAAATCTAG  49
      |||||||||||| ||||||||||||| |||||||||||||||||||||||
seq2  TTCATTTTATACTTTTCATGCCTTACGCACACACACACACTTAAATCTAG  50

seq1  ATTCCACATAGTATAGAAACCACAGAGTATTTGTTTTTTGAGTCTGG-AT  98
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATTCCACATAGTATAGAAACCACAGAGTATTTGTTTTTTGAGTCTGGAAT  100

seq1  TTTGTCACTTAAC-ATGATTT-ATAGTTCCATTCACTTTCCTGAAATTTT  146
      ||||||||||||| ||||||| ||||||||||||||||||||||||||||
seq2  TTTGTCACTTAACAATGATTTAATAGTTCCATTCACTTTCCTGAAATTTT  150

seq1  CATAATTTATTCGACTTTACACATGAATAAAATTCCACTTTCCATATGGA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTTATTCGACTTTACACATGAATAAAATTCCACTTTCCATATGGA  200

seq1  CCATGTTGCCTTTACCCATTCATCTGATGACCTCTAGGCTGGTTCCATAC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTTGCCTTTACCCATTCATCTGATGACCTCTAGGCTGGTTCCATAC  250

seq1  CTTGGCTATCGTGAATAATGTGAGGATCAGCGTGGATATGCAGGTATCTC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTATCGTGAATAATGTGAGGATCAGCGTGGATATGCAGGTATCTC  300

seq1  TGTAGTGTACTGATTTGAATCCTTCAAGTATACACCCAGTGTTGAGACAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTGTACTGATTTGAATCCTTCAAGTATACACCCAGTGTTGAGACAG  350

seq1  ACCCAATGAGAGCTCTCTTCTTGGTATTTGATATTTGACAAATCACTATA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAATGAGAGCTCTCTTCTTGGTATTTGATATTTGACAAATCACTATA  400

seq1  TTAGTGTCTGCAGTGGCAGCCTCACAATGTCACATTCTTATTTGGTATGG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTCTGCAGTGGCAGCCTCACAATGTCACATTCTTATTTGGTATGG  450

seq1  AAAAATGCCCCCCCTGCCCCCCCCTCATGGCTTTGTCAGGATTTGTTGTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGCCCCCCCTGCCCCCCCCTCATGGCTTTGTCAGGATTTGTTGTG  500

seq1  ATTTTATTTTTTAAAAAAATATTTTATTAACTTTTAGAGAGTTTC  541
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTTTTAAAAAAATATTTTATTAACTTTTAGAGAGTTTC  545


seq1: chr5_80372040_80372101
seq2: B6Ng01-218A02.g_400_461 (reverse)

seq1  TTTGTCTTATTGACGGTGTCTTTTGCCTTACAGAAGCTTTGCAATTTTAT  50
      |||||| ||||||| ||||| |||||||||||||||||||||||||||||
seq2  TTTGTCCTATTGACAGTGTCCTTTGCCTTACAGAAGCTTTGCAATTTTAT  50

seq1  GAAGTCCCATTT  62
      |  |||||||||
seq2  GTGGTCCCATTT  62


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