BAC Information

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BAC

Clone NameB6Ng01-218K09
Chromosome5 (Build37)
Map Location 73,446,636 - 73,447,804
singlet/doubletsinglet
Overlap geneFryl
Upstream geneGabrb1, Commd8, Atp10d, Corin, Nfxl1, Zar1, EG545758, Cnga1, LOC384275, Npal1, Txk, Tec, Slain2, Slc10a4, LOC667127
Downstream geneOciad1, Ociad2, LOC667154, LOC100042205, C130090K23Rik, LOC627733, Dcun1d4, BC031901, Sgcb, Spata18, Usp46
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218K09.bB6Ng01-218K09.g
ACCGA034719GA034720
length1,1651,195
definitionB6Ng01-218K09.b B6Ng01-218K09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgctagataatgattcttcggcacagacactctgccgtgtct
gttactcgtaaattatgttggaggaatatataaaactaagaaaagctccc
tctgaggggcagcagtgcctgagagtggtcatcccatgttggggcccagg
taattaagaaacaaagtccaggggctaagagatggatccccagttaagag
cacatgttgcttgttcttaggaccccagtttgagtcccacctacatggca
gctcaccgctgtctataactccagttccggggaacctaacaccctctttt
ggtttctgtggatgctccaccaatgtgatgtagagacatgtgcaggcaaa
gcctccatacacatgagataaaataataaaaactttttttaaaagtcaga
atgtgttttagtatttaataatacatctaaaacaagtatatttaaaaacc
ttttatcatctatttaatattcaaccttgaagcgaaaacgtcacctcaaa
agtccaaatgtatgggattccttgtctttaacagccaggactctgcacaa
gactttgccaattaatgatttataaaggactccctgagaggaaaacaagg
tcctccaatggggggcatcattggatctatcgagtgtgataatctaaccc
tactggtaataactgagattttcctgtgttttataactcagaagaccttc
tgttaaaagatctggcaggaaaaatgaatagttttatagccatctcacag
caacgccgttctcacagtcggtggtgtacgctgggggttttattcctctc
catgcacactcataacgcttgagttgattccttctgaatccagagcccgt
actggaaggaagccctcaacatcctgaagctggtggtgtctcgctctgca
agtcttgtcgtccccaatgacatccccaaggcctacggagtggacgtaag
ctctcccgaaatctccttcgctaaaattttcaataacgtctcgaaagagc
tgcccggcagacttagattttcactttgacatctctgaggtaagacgccc
caccatcgagaacagttctggtagagctctcatcacttcgaattctttct
ctcaaactgagtagttgaacttgtaccttagcaactggtacggattggtg
ctgtgaactggttag
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgttggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aagtatggtccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggaccagaatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggcttccc
aatggaggagctagagaaagtacccaaggagctaaagggatcttcaaccc
tattagtggaacacattatgactaccagtaccctgagcctctgactctag
ctgcatattatcaaagatgcctagtcgcatcactggaaagaaaagtccat
tgaacctgctaactttgtatgtccgtacagtaatgcagtccaaaggtgta
ttggcttgctaaggactcattcactcatgtgcacgatgtagctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_73446636_73447804
seq2: B6Ng01-218K09.b_43_1207 (reverse)

seq1  CTAACCAGTTTCACAGCACCCATCGCGGTACCCAGTGCTAA-GTACAAGT  49
      |||||||| ||||||||||| ||  | |||||   |||||| ||||||||
seq2  CTAACCAG-TTCACAGCACCAAT--CCGTACCAGTTGCTAAGGTACAAGT  47

seq1  TCCACTAACTTCAGTCTGAGAG-AAGAA-TCGAGGTGATGAGAGCTCCTA  97
      || ||||   ||||| |||||| ||||| |||| |||||||||||| |||
seq2  TCAACTA--CTCAGTTTGAGAGAAAGAATTCGAAGTGATGAGAGCT-CTA  94

seq1  ACAGAACTG-TCTCGATGGTGGGGCGTCTTACCTCAGAGATGTCAAAGTG  146
       |||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACTGTTCTCGATGGTGGGGCGTCTTACCTCAGAGATGTCAAAGTG  144

seq1  AAAATCTAAGGTCTTGCCGGGCAGCTCCTTCGAGACGTTATTGAAAATTT  196
      ||||||||| ||| ||||||||||||| ||||||||||||||||||||||
seq2  AAAATCTAA-GTC-TGCCGGGCAGCTCTTTCGAGACGTTATTGAAAATTT  192

seq1  TAGCGAAGGAGATTTCGGGAGAGCCTACGTCCACTCCGTAGGCCTTGGGG  246
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TAGCGAAGGAGATTTCGGGAGAGCTTACGTCCACTCCGTAGGCCTTGGGG  242

seq1  ATGTCATTGGGGACGACAAGACTTGCAGAGCGAGACACCACCAGCTTCAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATTGGGGACGACAAGACTTGCAGAGCGAGACACCACCAGCTTCAG  292

seq1  GATGTTGAGGGCTTCCTTCCAGTACGGGCTCTGGATTCAGAAGGAATCAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTGAGGGCTTCCTTCCAGTACGGGCTCTGGATTCAGAAGGAATCAA  342

seq1  CTCAAGCGTTATGAGTGTGCATGGAGAGGAATAAAACCCCCAGCGTACAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGCGTTATGAGTGTGCATGGAGAGGAATAAAACCCCCAGCGTACAC  392

seq1  CACCGACTGTGAGAACGGCGTTGCTGTGAGATGGCTATAAAACTATTCAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGACTGTGAGAACGGCGTTGCTGTGAGATGGCTATAAAACTATTCAT  442

seq1  TTTTCCTGCCAGATCTTTTAACAGAAGGTCTTCTGAGTTATAAAACACAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTGCCAGATCTTTTAACAGAAGGTCTTCTGAGTTATAAAACACAG  492

seq1  GAAAATCTCAGTTATTACCAGTAGGGTTAGATTATCACACTCGATAGATC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCTCAGTTATTACCAGTAGGGTTAGATTATCACACTCGATAGATC  542

seq1  CAATGATGCCCCCCATTGGAGGACCTTGTTTTCCTCTCAGGGAGTCCTTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGATGCCCCCCATTGGAGGACCTTGTTTTCCTCTCAGGGAGTCCTTT  592

seq1  ATAAATCATTAATTGGCAAAGTCTTGTGCAGAGTCCTGGCTGTTAAAGAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCATTAATTGGCAAAGTCTTGTGCAGAGTCCTGGCTGTTAAAGAC  642

seq1  AAGGAATCCCATACATTTGGACTTTTGAGGTGACGTTTTCGCTTCAAGGT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATCCCATACATTTGGACTTTTGAGGTGACGTTTTCGCTTCAAGGT  692

seq1  TGAATATTAAATAGATGATAAAAGGTTTTTAAATATACTTGTTTTAGATG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATTAAATAGATGATAAAAGGTTTTTAAATATACTTGTTTTAGATG  742

seq1  TATTATTAAATACTAAAACACATTCTGACTTTTAAAAAAAGTTTTTATTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTAAATACTAAAACACATTCTGACTTTTAAAAAAAGTTTTTATTA  792

seq1  TTTTATCTCATGTGTATGGAGGCTTTGCCTGCACATGTCTCTACATCACA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCTCATGTGTATGGAGGCTTTGCCTGCACATGTCTCTACATCACA  842

seq1  TTGGTGGAGCATCCACAGAAACCAAAAGAGGGTGTTAGGTTCCCCGGAAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGAGCATCCACAGAAACCAAAAGAGGGTGTTAGGTTCCCCGGAAC  892

seq1  TGGAGTTATAGACAGCGGTGAGCTGCCATGTAGGTGGGACTCAAACTGGG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTATAGACAGCGGTGAGCTGCCATGTAGGTGGGACTCAAACTGGG  942

seq1  GTCCTAAGAACAAGCAACATGTGCTCTTAACTGGGGATCCATCTCTTAGC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAAGAACAAGCAACATGTGCTCTTAACTGGGGATCCATCTCTTAGC  992

seq1  CCCTGGACTTTGTTTCTTAATTACCTGGGCCCCAACATGGGATGACCACT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGACTTTGTTTCTTAATTACCTGGGCCCCAACATGGGATGACCACT  1042

seq1  CTCAGGCACTGCTGCCCCTCAGAGGGAGCTTTTCTTAGTTTTATATATTC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGCACTGCTGCCCCTCAGAGGGAGCTTTTCTTAGTTTTATATATTC  1092

seq1  CTCCAACATAATTTACGAGTAACAGACACGGCAGAGTGTCTGTGCCGAAG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAACATAATTTACGAGTAACAGACACGGCAGAGTGTCTGTGCCGAAG  1142

seq1  AATCATTATCTAGCAAAGAATTC  1169
      |||||||||||||||||||||||
seq2  AATCATTATCTAGCAAAGAATTC  1165