BAC Information

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BAC

Clone NameB6Ng01-220L18
Chromosome5 (Build37)
Map Location 26,704,265 - 26,705,316
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100038949, EG272714, EG545739, Speer4a, EG664804, LOC619645, LOC100039045, 5031410I06Rik, LOC434689, LOC664837
Downstream gene4930584F24Rik, Dpp6, B930011P16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-220L18.bB6Ng01-220L18.g
ACCGA036219GA036220
length1,0501,087
definitionB6Ng01-220L18.b B6Ng01-220L18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgcccagcattcctagagcttgcacccatcaatcatcaactc
cccattgcctcctttctcagcagcttgtatcatcactccattctctgcct
tatgaggttgatgattttaaaggcctagggaaatacagtatatacacaca
atgaaatgttagtctttaatataaagaactcatctgagccttgtggtgga
caaccctgatgccagcactcagaagatggaaggagggttgggaggtcaag
tctgtcctcagatatggggcaagtctagagtggcctgggttacataaggc
cttgtctcaaaaacaaaacaagacaaaacaataacaaaaggttctattac
ttgctatagcatggacattgtatggagtaaaatcatccaggagtcttccc
tgcatgagtttcctaaaacaggaaaacttaagctccatgcttttacttta
ttattttagtttattaaagtctgtgccaggcatcataccatcaagcatca
gcaacaacaacactgtcactgttgtcattctgacttcacagaggaggaac
cggagtgtgggaagccacatgtgccgttgctgagtggcactgactactgc
tggccaccacgcataagattggacaaacaaccaatgtgtacatatgcagt
aaagttttttgcaaagacactgcctggcccaggtatgataatgaggttct
gtaaggtactgagagtataaccaatcagatgtgagacatgcaaatgaggt
atgataatgaggttctataaggtactgagagagagtagccaatcagatga
ggaacatgcaaatgaggcttagtgcataaccaattcgggtgtgagacacg
cccctcctaggcctataaaagcagcaccagttctgggctcgaagtctttc
acctctacaatcaagctctcccaataaacgtgtgcaagaaggatcctgtt
gcagcgtcgttcttcctggccagtcgagcgcgcgcagaagtgttgccgaa
acccggaaaagaaaacatcttcagctacgagcgagaccccctgctacagg


gaattcagaacttttcagctggggaacgagagtaccagtgagtacagctt
tacgaggtaagtctgatcttgaactttctaaggaaattcaagacagtcta
tcagaagtaaagtggaatatgtttggccttgaattttttctagtgttaga
agcccttttgttccttttcacatgttatcaagtggttaagatagggcgga
ttctagatgaaattcaggacaagctatcagaagtaaagtggggagagaga
gtaggaacaaagaggaaatatggtacacaaaataagtatacaggcctttc
caagggtcttgaacccgaggaaaagttaaggttaggtaggaatacctgga
gagagattagaagaaaaagaggaaaaagggaaaagaagaaagatcaatta
gcggaggtctctaggaaaaggagcctgtgctcatcgctggatgggctcgg
ggagccagctcttagtagctctgaagcagatgaagaattctcctctgaag
aaacagactgggaggaagaagcagctcattatgagaaaaaagggtaccag
ccaggtaaagtgctagctaatcagttaaggaagccaaaagcggctggcga
aggccagtttgctgattggcctcagggcagtcggtttcaaggtccgccct
atgcggagcccccgccctgcgtagtgcgtcagcaatgcgcagagagatgc
gcagagaggcagtgcgcagagaggcagtgcgcagactcattcattcccag
agaggaacaaaggaaaatacaacaggcatttccggtctttgaaggagccg
agggtgggcgtgtccacgctccggtagaatacttacaaattaaagaaatt
gccgagtcggtccgtaaatacggaacccaatgctaatttttacttgggtg
cagttagacaggctcgccggcatggcactaactcctgctgactggcaaac
gggtgtaaagccgctctccctagtatgggcaatatatgggaatggagagc
acttgcacgagcctgccaagcgcagtcccgagcaacgcagctgcttgact
ccggagccagaaagattggacctttttgacttggtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_26704265_26705316
seq2: B6Ng01-220L18.b_49_1098

seq1  GAATTCATTGCCCAGCATTCCTAGAGCTTGCACCCATCAATCATCAACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGCCCAGCATTCCTAGAGCTTGCACCCATCAATCATCAACTC  50

seq1  CCCATTGCCTCCTTTCTCAGCAGCTTGTATCATCACTCCATTCTCTGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTGCCTCCTTTCTCAGCAGCTTGTATCATCACTCCATTCTCTGCCT  100

seq1  TATGAGGTTGATGATTTTAAAGGCCTAGGGAAATACAGTATATACACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGGTTGATGATTTTAAAGGCCTAGGGAAATACAGTATATACACACA  150

seq1  ATGAAATGTTAGTCTTTAATATAAAGAACTCATCTGAGCCTTGTGGTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATGTTAGTCTTTAATATAAAGAACTCATCTGAGCCTTGTGGTGGA  200

seq1  CAACCCTGATGCCAGCACTCAGAAGATGGAAGGAGGGTTGGGAGGTCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCTGATGCCAGCACTCAGAAGATGGAAGGAGGGTTGGGAGGTCAAG  250

seq1  TCTGTCCTCAGATATGGGGCAAGTCTAGAGTGGCCTGGGTTACATAAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCTCAGATATGGGGCAAGTCTAGAGTGGCCTGGGTTACATAAGGC  300

seq1  CTTGTCTCAAAAACAAAACAAGACAAAACAATAACAAAAGGTTCTATTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTCAAAAACAAAACAAGACAAAACAATAACAAAAGGTTCTATTAC  350

seq1  TTGCTATAGCATGGACATTGTATGGAGTAAAATCATCCAGGAGTCTTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATAGCATGGACATTGTATGGAGTAAAATCATCCAGGAGTCTTCCC  400

seq1  TGCATGAGTTTCCTAAAACAGGAAAACTTAAGCTCCATGCTTTTACTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGAGTTTCCTAAAACAGGAAAACTTAAGCTCCATGCTTTTACTTTA  450

seq1  TTATTTTAGTTTATTAAAGTCTGTGCCAGGCATCATACCATCAAGCATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTAGTTTATTAAAGTCTGTGCCAGGCATCATACCATCAAGCATCA  500

seq1  GCAACAACAACACTGTCACTGTTGTCATTCTGACTTCACAGAGGAGGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAACAACACTGTCACTGTTGTCATTCTGACTTCACAGAGGAGGAAC  550

seq1  CGGAGTGTGGGAAGCCACATGTGCCGTTGCTGAGTGGCACTGACTACTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGTGTGGGAAGCCACATGTGCCGTTGCTGAGTGGCACTGACTACTGC  600

seq1  TGGCCACCACGCATAAGATTGGACAAACAACCAATGTGTACATATGCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCACCACGCATAAGATTGGACAAACAACCAATGTGTACATATGCAGT  650

seq1  AAAGTTTTTTGCAAAGACACTGCCTGGCCCAGGTATGATAATGAGGTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTTTTGCAAAGACACTGCCTGGCCCAGGTATGATAATGAGGTTCT  700

seq1  GTAAGGTACTGAGAGTATAACCAATCAGATGTGAGACATGCAAATGAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGTACTGAGAGTATAACCAATCAGATGTGAGACATGCAAATGAGGT  750

seq1  ATGATAATGAGGTTCTATAAGGTACTGAGAGAGAGTAGCCAATCAGATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAATGAGGTTCTATAAGGTACTGAGAGAGAGTAGCCAATCAGATGA  800

seq1  GGAACATGCAAATGAGGCTTAGTGCATAACCAATTCGGGTGTGAGACACG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACATGCAAATGAGGCTTAGTGCATAACCAATTCGGGTGTGAGACACG  850

seq1  CCCCTCCTAGGCCTATAAAAGCAGCACCAGTTCTGGGCTCGAAGTCTTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCTAGGCCTATAAAAGCAGCACCAGTTCTGGGCTCGAAGTCTTTC  900

seq1  ACCTCTACAATCAAGCTCTCCCAATAAACGTGTGC-AGAAGGATCCTGTT  949
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACCTCTACAATCAAGCTCTCCCAATAAACGTGTGCAAGAAGGATCCTGTT  950

seq1  GCAGCGTCGTTCTTCCTGGCCAGTCGAGCGCGCGCAAGAAGTGGTGCCGA  999
      ||||||||||||||||||||||||||||||||||| ||||||| ||||||
seq2  GCAGCGTCGTTCTTCCTGGCCAGTCGAGCGCGCGC-AGAAGTGTTGCCGA  999

seq1  AAACCCCGGAAAAG-AAACATCTTCAGGCACGAGCGAAGACCCCCTGCTA  1048
      ||  |||||||||| ||||||||||||  ||||||| |||||||||||||
seq2  AA--CCCGGAAAAGAAAACATCTTCAGCTACGAGCG-AGACCCCCTGCTA  1046

seq1  CAGG  1052
      ||||
seq2  CAGG  1050


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