BAC Information

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BAC

Clone NameB6Ng01-222I16
Chromosome5 (Build37)
Map Location 132,057,638 - 132,173,232
singlet/doubletdoublet
Overlap geneAuts2
Upstream geneCaln1, Wbscr17
Downstream gene4930563F08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222I16.bB6Ng01-222I16.g
ACCGA037530GA037531
length2691,103
definitionB6Ng01-222I16.b B6Ng01-222I16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,057,638 - 132,057,906)(132,172,123 - 132,173,232)
sequence
tccgacttgatgaggcaaagtttggagcctcttgaatcattctgccacgg
tgggcggcattggtgaggcctgctctgaggtttacagccctccctctttt
caacttgcctcagctgtagtccattaaagacccagggctgcgtcccccag
tcccaagctgggggtttactgcttgaggaagtcatgggaagctggtttta
tgatgcagtgcattcaaaagccatggagttatgtggtttgtgggtcattt
tggagtgagtgagtgtgtg

gaattctttatagttggccatatggtttgcagccctcgcaggctctaaat
ctttgatggaggtaccgcccttcagaaatgtcagcaaagaaaatactgct
tttaactttttcttcttaatgtgcccccaaaaacttcctttcaaaacaaa
ataataaaaaaagagccagcataattttctgacatactcccattagtgtg
taaattaggagttgctaagtaggccggctgggtctgggacgagtgtggcg
ggcaaggacctttcaggaagatccagttgttccaacactttccgaaagcc
cacagttcgccttttcccagtgccagcagttacagaagaagcctactcag
ctactcaagtattgagggacaaaggactcatttaacagatctgtgtaata
ggaaacaggtggataaatacggaacctgtgagcccttcacagtaatggcc
tttcactgctgaacgttatgtgggaggttaggctgccgtgtgacaacttg
ggtcatgtaggggaaaaaaaaaaatcccatcacaacagcatcgaggcaac
cctcagtaacacagcactgaaccagtctagatctgtggaatctctgggtg
atgcatctaccaaagtggccgtctttgatcagacccacagcctcctaaat
gagtcagtggagagcaagcacagtgcttctccaagactcaagatggtttc
caaggccatgatcaaggtgcactccattaggagagtgagggtgccataag
aggtgggggtgaatctgcctagtgtggaggcattgccgttcacagttcca
acacagtgccaacatgccagacccagcacatctggaccacagctctcctt
gtgagtgcttgctgtgagcccagggtttgctgttcctagggcaatgttcc
catcccaacctcacccttacccagtgctttgatgggggggagccatacat
ctttccttgaaccaccaagaagtatatggaataaaccctgtataggttgt
ttctttacagttttaagaacaggatatacctccatgcgcttgccccgctc
cctctctctgtttgttgtgctgctgcttactgctgatgtgcagtgcccat
aga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_132057638_132057906
seq2: B6Ng01-222I16.b_49_317

seq1  TCCGACTTGATGAGGCAAAGTTTGGAGCCTCTTGAATCATTCTGCCACGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGACTTGATGAGGCAAAGTTTGGAGCCTCTTGAATCATTCTGCCACGG  50

seq1  TGGGCGGCATTGGTGAGGCCTGCTCTGAGGTTTACAGCCCTCCCTCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCGGCATTGGTGAGGCCTGCTCTGAGGTTTACAGCCCTCCCTCTTTT  100

seq1  CAACTTGCCTCAGCTGTAGTCCATTAAAGACCCAGGGCTGCGTCCCCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTGCCTCAGCTGTAGTCCATTAAAGACCCAGGGCTGCGTCCCCCAG  150

seq1  TCCCAAGCTGGGGGTTTACTGCTTGAGGAAGTCATGGGAAGCTGGTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGCTGGGGGTTTACTGCTTGAGGAAGTCATGGGAAGCTGGTTTTA  200

seq1  TGATGCAGTGCATTCAAAAGCCATGGAGTTATGTGGTTTGTGGGTCATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCAGTGCATTCAAAAGCCATGGAGTTATGTGGTTTGTGGGTCATTT  250

seq1  TGGAGTGAGTGAGTGTGTG  269
      |||||||||||||||||||
seq2  TGGAGTGAGTGAGTGTGTG  269


seq1: chr5_132172123_132173232
seq2: B6Ng01-222I16.g_69_1171 (reverse)

seq1  TCTATGGGCACTGCACATACAAGGCAGGTAGGCAGGCAGGCAC-ACATAC  49
      |||||||||||||||||| ||  ||| ||| ||| ||| |||| ||| ||
seq2  TCTATGGGCACTGCACAT-CA--GCA-GTAAGCA-GCA-GCACAACAAAC  44

seq1  AGAGAGAGGGGGCGGGGGCAAGCGCAATGGAGGTATATCCTGTCTTAAAA  99
      |||||||||| || ||||||||||| |||||||||||||||||  | |||
seq2  AGAGAGAGGGAGC-GGGGCAAGCGC-ATGGAGGTATATCCTGTTCTTAAA  92

seq1  ACTGTAAAGAAACAACCTATACAGGGTTTATTCCATATAC-TCTTGGTGG  148
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACTGTAAAGAAACAACCTATACAGGGTTTATTCCATATACTTCTTGGTGG  142

seq1  TTCCAAGGAAAGATGTATGGCT-CCCCCAATCAAAGCACTGGGTAAGGGG  197
      || ||||||||||||||||||| ||||| ||||||||||||||||| |||
seq2  TT-CAAGGAAAGATGTATGGCTCCCCCCCATCAAAGCACTGGGTAA-GGG  190

seq1  TGAGGTTGGGATGGGAACATTGCCCTAGGAACAGCAAACCCTGGGCTCAC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTGGGATGGGAACATTGCCCTAGGAACAGCAAACCCTGGGCTCAC  240

seq1  AGCAAGCACTCACAAGGAGAGCTGTGGTCCAGATGTGCTGGGTCTGGCAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCACTCACAAGGAGAGCTGTGGTCCAGATGTGCTGGGTCTGGCAT  290

seq1  GTTGGCACTGTGTTGGAACTGTGAACGGCAATGCCTCCACACTAGGCAGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCACTGTGTTGGAACTGTGAACGGCAATGCCTCCACACTAGGCAGA  340

seq1  TTCACCCCCACCTCTTATGGCACCCTCACTCTCCTAATGGAGTGCACCTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCCCCACCTCTTATGGCACCCTCACTCTCCTAATGGAGTGCACCTT  390

seq1  GATCATGGCCTTGGAAACCATCTTGAGTCTTGGAGAAGCACTGTGCTTGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATGGCCTTGGAAACCATCTTGAGTCTTGGAGAAGCACTGTGCTTGC  440

seq1  TCTCCACTGACTCATTTAGGAGGCTGTGGGTCTGATCAAAGACGGCCACT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACTGACTCATTTAGGAGGCTGTGGGTCTGATCAAAGACGGCCACT  490

seq1  TTGGTAGATGCATCACCCAGAGATTCCACAGATCTAGACTGGTTCAGTGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAGATGCATCACCCAGAGATTCCACAGATCTAGACTGGTTCAGTGC  540

seq1  TGTGTTACTGAGGGTTGCCTCGATGCTGTTGTGATGGGATTTTTTTTTTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTACTGAGGGTTGCCTCGATGCTGTTGTGATGGGATTTTTTTTTTT  590

seq1  CCCCTACATGACCCAAGTTGTCACACGGCAGCCTAACCTCCCACATAACG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTACATGACCCAAGTTGTCACACGGCAGCCTAACCTCCCACATAACG  640

seq1  TTCAGCAGTGAAAGGCCATTACTGTGAAGGGCTCACAGGTTCCGTATTTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCAGTGAAAGGCCATTACTGTGAAGGGCTCACAGGTTCCGTATTTA  690

seq1  TCCACCTGTTTCCTATTACACAGATCTGTTAAATGAGTCCTTTGTCCCTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTGTTTCCTATTACACAGATCTGTTAAATGAGTCCTTTGTCCCTC  740

seq1  AATACTTGAGTAGCTGAGTAGGCTTCTTCTGTAACTGCTGGCACTGGGAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTGAGTAGCTGAGTAGGCTTCTTCTGTAACTGCTGGCACTGGGAA  790

seq1  AAGGCGAACTGTGGGCTTTCGGAAAGTGTTGGAACAACTGGATCTTCCTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCGAACTGTGGGCTTTCGGAAAGTGTTGGAACAACTGGATCTTCCTG  840

seq1  AAAGGTCCTTGCCCGCCACACTCGTCCCAGACCCAGCCGGCCTACTTAGC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTCCTTGCCCGCCACACTCGTCCCAGACCCAGCCGGCCTACTTAGC  890

seq1  AACTCCTAATTTACACACTAATGGGAGTATGTCAGAAAATTATGCTGGCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCTAATTTACACACTAATGGGAGTATGTCAGAAAATTATGCTGGCT  940

seq1  CTTTTTTTATTATTTTGTTTTGAAAGGAAGTTTTTGGGGGCACATTAAGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTATTATTTTGTTTTGAAAGGAAGTTTTTGGGGGCACATTAAGA  990

seq1  AGAAAAAGTTAAAAGCAGTATTTTCTTTGCTGACATTTCTGAAGGGCGGT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGTTAAAAGCAGTATTTTCTTTGCTGACATTTCTGAAGGGCGGT  1040

seq1  ACCTCCATCAAAGATTTAGAGCCTGCGAGGGCTGCAAACCATATGGCCAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCATCAAAGATTTAGAGCCTGCGAGGGCTGCAAACCATATGGCCAA  1090

seq1  CTATAAAGAATTC  1110
      |||||||||||||
seq2  CTATAAAGAATTC  1103


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