BAC Information

Click to search

BAC

Clone NameB6Ng01-222M12
Chromosome5 (Build37)5 (Build37)
Map Location 94,796,164 - 94,797,22893,931,931 - 93,932,759
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC632115, EG330129, LOC100040885, LOC666064, LOC100040909, C87414, LOC666075, LOC666077, LOC666081, EG665802, LOC100040408, LOC100040981, EG622719, LOC100041003, BC061212, EG622744, LOC100041032, LOC100041042, LOC624421
Downstream geneAA792892, LOC665521, LOC665551, LOC100041102, LOC665560, LOC100041115, LOC624507, LOC621203, LOC100041153, LOC665499, LOC624698, LOC100041179, LOC624655, LOC100041166, LOC665469, LOC622894, EG666121, LOC666125, EG666133, LOC100041296, LOC100041253, LOC100041264, EG624049
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222M12.bB6Ng01-222M12.g
ACCGA037704GA037705
length1,062953
definitionB6Ng01-222M12.b B6Ng01-222M12.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(94,796,164 - 94,797,228)(93,931,931 - 93,932,759)
sequence
gaattccatgccaaggatagaacacagtaggaatggtttcagcatgatgc
taggagtgctgcccaggtgactttcatcttctgtttcatgctcttcagag
tagatggatggagagcctggcaggtgttgttattgtttgtttctgtgttt
gtgacttctgtctttagttgagtgtttctctggtgttggctgaggctgag
atcctgctgccaagccctgttctctgtctggccatgaaacttctagcccc
tttgctggtctgtttctcagagcttttattctggtggcttgcttccctct
accacctatgcaggtgtagcagctgcttcacagttgtgcccttagtattt
agcattcacatcttcctagcccacacaattcctttgcattgctaaccctg
agcctccacagtaggaactgggaatgaacacttgtgagcctcagagcaaa
acctgctttctgccccaatccaagaacagccatttttttccttgcttggc
agttgtactcaaaaaggcacaggccagaaactgaagacttgaatccaaag
gaactgttgagcttggctgataaatttttatgttgagatctttactcaat
tgacttgagagtattggaggatgatagatacaaagcaacttgctttctta
aacttgcagatatcctgttagacaggcaccatttgatagggacgatttct
tttttccaatgtctcttttgaattctctattaaaaatctagtgtccaggt
cttcagtttcattccattgatcaacctattttcctgccaacacaatgcag
ttttcactatactatggctatgtagtataacttcagatcagaaatggtga
tacttctagaacatcatatattatagaggattatggtcttcagctcagtc
taaaggttgcctgtgagtatctgtaattatcttagacaggtgatagcaga
tcctctcagaggacggccatacctggatactttatatacgtagatcttgt
cattagcaataatgtaaggggtttgatgtctcctatgagatgatcccaaa
cccctgtgtctg
gaattccacttaccagtgacctcaaggacctggttgtgctagggtgcctg
cagcatggagagtcctctggggaccttagggccctctgctgagattgcac
cgaaaatcgctgaacgctggtagaggattttaagaagggtattaataact
cacttaaagggctggtaagatggcttagtggttaagagtaccgactgctc
ttccaaaggtcctgagttaaaatccagcaaccacatggtggctcacaacc
atctgtaacaagatctaactcccttctggagtgtctacagccatatataa
taaataaataaatctttaaaaaaataactcacttaaagaaatatagaact
tgggaggcagaggtgggcacatttctgagtttgaggcaagactagtctac
aaagtgagttccaggacagcaagggccataccgaaaaaccctgtctcaaa
aaacaaaagcaaaaacaaaaacaaaaacaaaaacaaaacaacaacaaaag
aaatacaggagaccactgctatacaggtagaagcccttagggaggaaaca
caaaaatcccttaaagaaatacaggaaaacacaatcaaacaggtgatgga
attgaacaaaatcatccaagatcttaaaatggaagtggaaacaataaaaa
aacccaatggaggcaactctggagaaagaaatcctaggaaagaaatcagg
aaacatagatgcaagtatcagcaacagaatacaagagatggaagagagaa
tctcaggcctccaatgaggacctattatcaatactcctcaaacttttcca
caaaaatagaaacagaaagtactctgcaaaattcattctatgaagccaca
attactctcatacctgaaccacaaaaagacccaacaaagaagagaacttc
acaacaacttcccttatgaatatcaatacaaaaatactccataaaattct
tgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_94796164_94797228
seq2: B6Ng01-222M12.b_43_1104

seq1  GAATTCCATGCCAAGGATAGAACACAGTAGGAATGGTTTCAGCATGATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCCAAGGATAGAACACAGTAGGAATGGTTTCAGCATGATGC  50

seq1  TAGGAGTGCTGCCCAGGTGACTTTCATCTTCTGTTTCATGCTCTTCAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGTGCTGCCCAGGTGACTTTCATCTTCTGTTTCATGCTCTTCAGAG  100

seq1  TAGATGGATGGAGAGCCTGGCAGGTGTTGTTATTGTTTGTTTCTGTGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGGATGGAGAGCCTGGCAGGTGTTGTTATTGTTTGTTTCTGTGTTT  150

seq1  GTGACTTCTGTCTTTAGTTGAGTGTTTCTCTGGTGTTGGCTGAGGCTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTTCTGTCTTTAGTTGAGTGTTTCTCTGGTGTTGGCTGAGGCTGAG  200

seq1  ATCCTGCTGCCAAGCCCTGTTCTCTGTCTGGCCATGAAACTTCTAGCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGCTGCCAAGCCCTGTTCTCTGTCTGGCCATGAAACTTCTAGCCCC  250

seq1  TTTGCTGGTCTGTTTCTCAGAGCTTTTATTCTGGTGGCTTGCTTCCCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGGTCTGTTTCTCAGAGCTTTTATTCTGGTGGCTTGCTTCCCTCT  300

seq1  ACCACCTATGCAGGTGTAGCAGCTGCTTCACAGTTGTGCCCTTAGTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCTATGCAGGTGTAGCAGCTGCTTCACAGTTGTGCCCTTAGTATTT  350

seq1  AGCATTCACATCTTCCTAGCCCACACAATTCCTTTGCATTGCTAACCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCACATCTTCCTAGCCCACACAATTCCTTTGCATTGCTAACCCTG  400

seq1  AGCCTCCACAGTAGGAACTGGGAATGAACACTTGTGAGCCTCAGAGCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCCACAGTAGGAACTGGGAATGAACACTTGTGAGCCTCAGAGCAAA  450

seq1  ACCTGCTTTCTGCCCCAATCCAAGAACAGCCATTTTTTTCCTTGCTTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCTTTCTGCCCCAATCCAAGAACAGCCATTTTTTTCCTTGCTTGGC  500

seq1  AGTTGTACTCAAAAAGGCACAGGCCAGAAACTGAAGACTTGAATCCAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTACTCAAAAAGGCACAGGCCAGAAACTGAAGACTTGAATCCAAAG  550

seq1  GAACTGTTGAGCTTGGCTGATAAATTTTTATGTTGAGATCTTTACTCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGTTGAGCTTGGCTGATAAATTTTTATGTTGAGATCTTTACTCAAT  600

seq1  TGACTTGAGAGTATTGGAGGATGATAGATACAAAGCAACTTGCTTTCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTGAGAGTATTGGAGGATGATAGATACAAAGCAACTTGCTTTCTTA  650

seq1  AACTTGCAGATATCCTGTTAGACAGGCACCATTTGATAGGGACGATTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGCAGATATCCTGTTAGACAGGCACCATTTGATAGGGACGATTTCT  700

seq1  TTTTTCCAATGTCTCTTTTGAATTCTCTATTAAAAATCTAGTGTCCAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCAATGTCTCTTTTGAATTCTCTATTAAAAATCTAGTGTCCAGGT  750

seq1  CTTCAGTTTCATTCCATTGATCAACCTATTTTCCTGCCAACACAATGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTTTCATTCCATTGATCAACCTATTTTCCTGCCAACACAATGCAG  800

seq1  TTTTCACTATACTATGGCTATGTAGTATAACTTCAGATCAGAAATGGTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACTATACTATGGCTATGTAGTATAACTTCAGATCAGAAATGGTGA  850

seq1  TACTTCTAGAACATCATATATTATAGAGGATTATGGTCTTCAGGCTCAGT  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TACTTCTAGAACATCATATATTATAGAGGATTATGGTCTTCA-GCTCAGT  899

seq1  CTAAAGGTTGCCTGTGAGTATCTGTAATTATCTTAGACAGGTGATAGCAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGGTTGCCTGTGAGTATCTGTAATTATCTTAGACAGGTGATAGCAG  949

seq1  ATCCTCTCAGAGGACGGCCATACCTGGATACTTTATATACGTAGATCTTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTCAGAGGACGGCCATACCTGGATACTTTATATACGTAGATCTTG  999

seq1  TCATTAGCAATAATGT-AGGGGTTTGATGTCTCCTAATGAGATTGATCCC  1049
      |||||||||||||||| |||||||||||||||||| |||||| |||||||
seq2  TCATTAGCAATAATGTAAGGGGTTTGATGTCTCCT-ATGAGA-TGATCCC  1047

seq1  AAAACCCCTGTGTCTG  1065
       |||||||||||||||
seq2  -AAACCCCTGTGTCTG  1062

seq1: chr5_93931931_93932759
seq2: B6Ng01-222M12.g_67_907

seq1  GAATTCCACTTACCAGTGACCTCAAGGACCTGGTTGTGCTAGGGTGCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTTACCAGTGACCTCAAGGACCTGGTTGTGCTAGGGTGCCTG  50

seq1  CAGCATGGAGAGTCCTCTGGGGACCTTAGGGCCCTCTGCTGAGATTGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGGAGAGTCCTCTGGGGACCTTAGGGCCCTCTGCTGAGATTGCAC  100

seq1  CGAAAATCGCTGAACGCTGGTAGAGGATTTTAAGAAGGGTATTAATAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAATCGCTGAACGCTGGTAGAGGATTTTAAGAAGGGTATTAATAACT  150

seq1  CACTTAAAGGGCTGGTAAGATGGCTTAGTGGTTAAGAGTACCGACTGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAAAGGGCTGGTAAGATGGCTTAGTGGTTAAGAGTACCGACTGCTC  200

seq1  TTCCAAAGGTCCTGAGTTAAAATCCAGCAACCACATGGTGGCTCACAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAAGGTCCTGAGTTAAAATCCAGCAACCACATGGTGGCTCACAACC  250

seq1  ATCTGTAACAAGATCTAACTCCCTTCTGGAGTGTCTACAGCCATATATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAACAAGATCTAACTCCCTTCTGGAGTGTCTACAGCCATATATAA  300

seq1  TAAATAAATAAATCTTTAAAAAAATAACTCACTTAAAGAAATATAGAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAATAAATCTTTAAAAAAATAACTCACTTAAAGAAATATAGAACT  350

seq1  TGGGAGGCAGAGGTGGGCACATTTCTGAGTTTGAGGCAAGACTAGTCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGCAGAGGTGGGCACATTTCTGAGTTTGAGGCAAGACTAGTCTAC  400

seq1  AAAGTGAGTTCCAGGACAGCAAGGGCCATACCGAAAAACCCTGTCTCA--  448
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  AAAGTGAGTTCCAGGACAGCAAGGGCCATACCGAAAAACCCTGTCTCAAA  450

seq1  ----------AAAAACAAAAACAAAAACAAAAACAAAACAACAACAAAAG  488
                ||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAGCAAAAACAAAAACAAAAACAAAAACAAAACAACAACAAAAG  500

seq1  AAATACAGGAGACCACTGCTATACAGGTAGAAGCCCTTAGGGAGGAAACA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAGGAGACCACTGCTATACAGGTAGAAGCCCTTAGGGAGGAAACA  550

seq1  CAAAAATCCCTTAAAGAAATACAGGAAAACACAATCAAACAGGTGATGGA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATCCCTTAAAGAAATACAGGAAAACACAATCAAACAGGTGATGGA  600

seq1  ATTGAACAAAATCATCCAAGATCTTAAAATGGAAGTGGAAACAATAAAAA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAACAAAATCATCCAAGATCTTAAAATGGAAGTGGAAACAATAAAAA  650

seq1  AACCCAATGGAGGCAACTCTGGAGAAAGAAATCCTAGGAAAGAAATCAGG  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAATGGAGGCAACTCTGGAGAAAGAAATCCTAGGAAAGAAATCAGG  700

seq1  AAACATAGATGCAAGTATCAGCAACAGAATACAAGAGATGGAAGAGAGAA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAGATGCAAGTATCAGCAACAGAATACAAGAGATGGAAGAGAGAA  750

seq1  TCTCAGGCCTCCAAAGAGGACCTATTATCAATACTCCTCAAACTTTTCCA  788
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCTCAGGCCTCCAATGAGGACCTATTATCAATACTCCTCAAACTTTTCCA  800

seq1  CAAAAATAGAAACAGAAAGTACTCTGCAAAATTCATTCTAT  829
      |||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATAGAAACAGAAAGTACTCTGCAAAATTCATTCTAT  841