BAC Information

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BAC

Clone NameB6Ng01-222O12
Chromosome5 (Build37)3 (Build37)
Map Location 94,796,552 - 94,797,064151,330,781 - 151,331,215
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC632115, EG330129, LOC100040885, LOC666064, LOC100040909, C87414, LOC666075, LOC666077, LOC666081, EG665802, LOC100040408, LOC100040981, EG622719, LOC100041003, BC061212, EG622744, LOC100041032, LOC100041042, LOC624421
Downstream geneAA792892, LOC665521, LOC665551, LOC100041102, LOC665560, LOC100041115, LOC624507, LOC621203, LOC100041153, LOC665499, LOC624698, LOC100041179, LOC624655, LOC100041166, LOC665469, LOC622894, EG666121, LOC666125, EG666133, LOC100041296, LOC100041253, LOC100041264, EG624049
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222O12.bB6Ng01-222O12.g
ACCGA037794GA037795
length910435
definitionB6Ng01-222O12.b B6Ng01-222O12.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(94,796,552 - 94,797,064)(151,330,781 - 151,331,215)
sequence
gaattcaatagacttaaaatagtatcttcaacatgatttctctgtcaaga
gatcacatccaaagaccttctaggtctataagatccggctggaatgcaga
catgcctggacctggctataatatagatacacccttagtacacacattta
attcctaacaatgaagataaagttagtttgtagaaggaagtagtcacttt
tgaaagcaatgtccaattgaggggcagatggagtgatgaatcagagaaag
ttttgaccgaatgagttagagaaaggatatgcctaactcacatgggaata
gcacaggaaagagaggatactgaggagcagagtagagagggagagaggag
agaggagagagagagagagagagagagagagagagatagagttgctaacc
ctgagcctccacagtaggaactgggaatgaacacttgtgagcctcagagc
aaaacctgctttctgccccaatccaagaacagccatttttttccttgctt
ggcagttgtactcaaaaaggcacaggccagaaactgaagacttgaatcca
aaggaactgttgagcttggctgataaatttttatgttgagatctttactc
aattgacttgagagtattggaggatgatagatacaaagcaacttgctttc
ttaaactttgcagatatccctgttagacaggcaccatttgataggggacg
atttcttttttccaattgtctcttttgaattctctattaaaaatctagtg
tccaggtcttcagtttcattccattgatcaacctattttcctgccaacac
aatgcagttttcactatactatggctatgtagtataacttcagaatcaga
aatggtggatacttctagaacatcatatattatagaggattatggccttc
aggctcagtc
gaattcatttaaaggaaagatttctgtccacatgccagactggtgtgggt
aaaatggacagagtttagaaactaatatattaaaatggtggagaaactga
tcattttatgctgaggtaacttaaaaaaaaaaaaagaaaagctcacagaa
gagggcgactgaagtaacccacaaaggattatcattggagcaaaacttca
gatgcctttccggttttcatagagggaagtgggagtggaacttagagtgt
ctgaattataaaagagatacaaaattcatctatcggaagattctagggaa
tagtttcctggctttagactaatagacaatgttctaccttgaatatcaag
gggtcaaaaagagtttaagcttgtgtgcgtgcatgtgcgtgtgcttgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_94796552_94797064
seq2: B6Ng01-222O12.b_435_953

seq1  TTGCTAACCCTGAGCCTCCACAGTAGGAACTGGGAATGAACACTTGTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAACCCTGAGCCTCCACAGTAGGAACTGGGAATGAACACTTGTGAG  50

seq1  CCTCAGAGCAAAACCTGCTTTCTGCCCCAATCCAAGAACAGCCATTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGAGCAAAACCTGCTTTCTGCCCCAATCCAAGAACAGCCATTTTTT  100

seq1  TCCTTGCTTGGCAGTTGTACTCAAAAAGGCACAGGCCAGAAACTGAAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGCTTGGCAGTTGTACTCAAAAAGGCACAGGCCAGAAACTGAAGAC  150

seq1  TTGAATCCAAAGGAACTGTTGAGCTTGGCTGATAAATTTTTATGTTGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCCAAAGGAACTGTTGAGCTTGGCTGATAAATTTTTATGTTGAGA  200

seq1  TCTTTACTCAATTGACTTGAGAGTATTGGAGGATGATAGATACAAAGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACTCAATTGACTTGAGAGTATTGGAGGATGATAGATACAAAGCAA  250

seq1  CTTGCTTTCTTAAAC-TTGCAGATAT-CCTGTTAGACAGGCACCATTTGA  298
      ||||||||||||||| |||||||||| |||||||||||||||||||||||
seq2  CTTGCTTTCTTAAACTTTGCAGATATCCCTGTTAGACAGGCACCATTTGA  300

seq1  TA-GGGACGATTTCTTTTTTCCAA-TGTCTCTTTTGAATTCTCTATTAAA  346
      || ||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TAGGGGACGATTTCTTTTTTCCAATTGTCTCTTTTGAATTCTCTATTAAA  350

seq1  AATCTAGTGTCCAGGTCTTCAGTTTCATTCCATTGATCAACCTATTTTCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAGTGTCCAGGTCTTCAGTTTCATTCCATTGATCAACCTATTTTCC  400

seq1  TGCCAACACAATGCAGTTTTCACTATACTATGGCTATGTAGTATAACTTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAACACAATGCAGTTTTCACTATACTATGGCTATGTAGTATAACTTC  450

seq1  AG-ATCAGAAATGGT-GATACTTCTAGAACATCATATATTATAGAGGATT  494
      || |||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGAATCAGAAATGGTGGATACTTCTAGAACATCATATATTATAGAGGATT  500

seq1  ATGGTCTTCAGGCTCAGTC  513
      |||| ||||||||||||||
seq2  ATGGCCTTCAGGCTCAGTC  519

seq1: chr3_151330781_151331215
seq2: B6Ng01-222O12.g_68_502

seq1  GAATTCATTTAAAGGAAAGATTTCTGTCCACATGCCAGACTGGTGTGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTAAAGGAAAGATTTCTGTCCACATGCCAGACTGGTGTGGGT  50

seq1  AAAATGGACAGAGTTTAGAAACTAATATATTAAAATGGTGGAGAAACTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGACAGAGTTTAGAAACTAATATATTAAAATGGTGGAGAAACTGA  100

seq1  TCATTTTATGCTGAGGTAACTTAAAAAAAAAAAAAGAAAAGCTCACAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTATGCTGAGGTAACTTAAAAAAAAAAAAAGAAAAGCTCACAGAA  150

seq1  GAGGGCGACTGAAGTAACCCACAAAGGATTATCATTGGAGCAAAACTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCGACTGAAGTAACCCACAAAGGATTATCATTGGAGCAAAACTTCA  200

seq1  GATGCCTTTCCGGTTTTCATAGAGGGAAGTGGGAGTGGAACTTAGAGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCTTTCCGGTTTTCATAGAGGGAAGTGGGAGTGGAACTTAGAGTGT  250

seq1  CTGAATTATAAAAGAGATACAAAATTCATCTATCGGAAGATTCTAGGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTATAAAAGAGATACAAAATTCATCTATCGGAAGATTCTAGGGAA  300

seq1  TAGTTTCCTGGCTTTAGACTAATAGACAATGTTCTACCTTGAATATCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTCCTGGCTTTAGACTAATAGACAATGTTCTACCTTGAATATCAAG  350

seq1  GGGTCAAAAAGAGTTTAAGCTTGTGTGCGTGCATGTGCGTGTGCTTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCAAAAAGAGTTTAAGCTTGTGTGCGTGCATGTGCGTGTGCTTGTGT  400

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  435
      |||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  435