BAC Information

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BAC

Clone NameB6Ng01-223N22
Chromosome5 (Build37)
Map Location 56,316,435 - 56,317,551
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666405
Downstream geneLOC100041335
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223N22.bB6Ng01-223N22.g
ACCGA038495GA038496
length1,1171,165
definitionB6Ng01-223N22.b B6Ng01-223N22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgtttttaatagctgagtagtactccatttttaaaatccatt
ttctgtatccattcttctattgaggaacatctggttctttccagattctg
ggtattataaataaggctgaacatagtggagaatgtgtcctttttacgtg
ttggagcatcttctgagtatatgctcaggagtggtattgctgtgtcctca
ggtagtactatatccagttttctgaggaaatgtcaaactgattttcagga
atttgataactattcttactgccaacattatttgtgtttttcttctagaa
attaagctgcatccctccaatttcagatgcctgagcaaagatgaaggaag
tgtctaattcaattctataccaaattcagggaaacctatcaattatttct
tcccaactgtcctctctttgctgtagacagtttgtattttgaaaggcagc
attttgtactctatgctttgaggtgttttgcatgaataagagaataattg
tagagacactcaattgagctgtgttaagtatgatctccctattttgtgga
aatggaatcagagttgacaaggcacagggggtcaacccaagtgggaaaat
aaaaggctgttaatctacatcaagagaatattgctgactggcctggtccc
gctgaataaatcatttactgcaaatatacttggctaaaggtaataatgag
aggttatcagggtagggcactataaaattgtttcagtgaaatgagaatag
atagaaactttacaatgggataataccttgacctagtgtcatacacaaca
aaggaaaggttacactgattgagaaatgaaatgctaagtgttctaatgac
tttgaacataggacaagagaagcaggtgacatgttgtaataaatatatta
aacttagtctctcaggtcacgtaggttagccaaaacacatcacacacatg
cacacatgtattaggcaaacacatcacagaaatgcacacatagttagcta
aaacccatcacacatatgtgcatgtgcacgcacacacaccacaaatacac
tataatatactacatcaccacacatatgttacatccacacacaaacacac
tcacacagcacaccaac
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctaagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagct
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagttacaatttcctaaagacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaatcacccttggaaggagttacagagacaaagtttggagctgagatta
aagggtggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgcccggggcctagcaaa
cacagaagtggatgcccacagttcagctaatggatggatcacagggctcc
caatggaggagctagagaaagtacccaaggagctaaagggatctgcaccc
tataggtgatcacattatgaactaccagtaccccgagctctgactctagc
tgccatatgtattcaaaggatgcctagttcgccattcactgaaagagagt
ctattggacaccacttatatgtcctagaacatggcaacgtcacaggctca
ataaagggatgaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_56316435_56317551
seq2: B6Ng01-223N22.b_48_1164

seq1  GAATTCATTGTTTTTAATAGCTGAGTAGTACTCCATTTTTAAAATCCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTTTTTAATAGCTGAGTAGTACTCCATTTTTAAAATCCATT  50

seq1  TTCTGTATCCATTCTTCTATTGAGGAACATCTGGTTCTTTCCAGATTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTATCCATTCTTCTATTGAGGAACATCTGGTTCTTTCCAGATTCTG  100

seq1  GGTATTATAAATAAGGCTGAACATAGTGGAGAATGTGTCCTTTTTACGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTATAAATAAGGCTGAACATAGTGGAGAATGTGTCCTTTTTACGTG  150

seq1  TTGGAGCATCTTCTGAGTATATGCTCAGGAGTGGTATTGCTGTGTCCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCATCTTCTGAGTATATGCTCAGGAGTGGTATTGCTGTGTCCTCA  200

seq1  GGTAGTACTATATCCAGTTTTCTGAGGAAATGTCAAACTGATTTTCAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTACTATATCCAGTTTTCTGAGGAAATGTCAAACTGATTTTCAGGA  250

seq1  ATTTGATAACTATTCTTACTGCCAACATTATTTGTGTTTTTCTTCTAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATAACTATTCTTACTGCCAACATTATTTGTGTTTTTCTTCTAGAA  300

seq1  ATTAAGCTGCATCCCTCCAATTTCAGATGCCTGAGCAAAGATGAAGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGCTGCATCCCTCCAATTTCAGATGCCTGAGCAAAGATGAAGGAAG  350

seq1  TGTCTAATTCAATTCTATACCAAATTCAGGGAAACCTATCAATTATTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAATTCAATTCTATACCAAATTCAGGGAAACCTATCAATTATTTCT  400

seq1  TCCCAACTGTCCTCTCTTTGCTGTAGACAGTTTGTATTTTGAAAGGCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACTGTCCTCTCTTTGCTGTAGACAGTTTGTATTTTGAAAGGCAGC  450

seq1  ATTTTGTACTCTATGCTTTGAGGTGTTTTGCATGAATAAGAGAATAATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTACTCTATGCTTTGAGGTGTTTTGCATGAATAAGAGAATAATTG  500

seq1  TAGAGACACTCAATTGAGCTGTGTTAAGTATGATCTCCCTATTTTGTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGACACTCAATTGAGCTGTGTTAAGTATGATCTCCCTATTTTGTGGA  550

seq1  AATGGAATCAGAGTTGACAAGGCACAGGGGGTCAACCCAAGTGGGAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAATCAGAGTTGACAAGGCACAGGGGGTCAACCCAAGTGGGAAAAT  600

seq1  AAAAGGCTGTTAATCTACATCAAGAGAATATTGCTGACTGGCCTGGTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCTGTTAATCTACATCAAGAGAATATTGCTGACTGGCCTGGTCCC  650

seq1  GCTGAATAAATCATTTACTGCAAATATACTTGGCTAAAGGTAATAATGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAATAAATCATTTACTGCAAATATACTTGGCTAAAGGTAATAATGAG  700

seq1  AGGTTATCAGGGTAGGGCACTATAAAATTGTTTCAGTGAAATGAGAATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTATCAGGGTAGGGCACTATAAAATTGTTTCAGTGAAATGAGAATAG  750

seq1  ATAGAAACTTTACAATGGGATAATACCTTGACCTAGTGTCATACACAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAACTTTACAATGGGATAATACCTTGACCTAGTGTCATACACAACA  800

seq1  AAGG-AAGGTTACACTGATTGAGAAATGAAATGCTAAGTGTTCTAATGAC  849
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGGTTACACTGATTGAGAAATGAAATGCTAAGTGTTCTAATGAC  850

seq1  TTTGAACATAGGACAAGAGAAGCAGGTGACATGTTGTAATAAATATATTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAACATAGGACAAGAGAAGCAGGTGACATGTTGTAATAAATATATTA  900

seq1  AACTTAGTCTCTCA-GTCACGTAGGTTAGCCAAAACACATCACACACATG  948
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AACTTAGTCTCTCAGGTCACGTAGGTTAGCCAAAACACATCACACACATG  950

seq1  CACACATGTATTAGGCAAAACACATCACAGAAATGCACACATAGGTTAGC  998
      |||||||||||||||| |||||||||||||||||||||||||| ||||||
seq2  CACACATGTATTAGGC-AAACACATCACAGAAATGCACACATA-GTTAGC  998

seq1  TAAAACCCATCACACATATGTGCATGTGCACGCACACACA-CACAAATAC  1047
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TAAAACCCATCACACATATGTGCATGTGCACGCACACACACCACAAATAC  1048

seq1  AACCTAT-ATATACCTACATCA-CACACATATGTACAATTCACACAC--A  1093
      |  |||| ||||| |||||||| |||||||||||   || |||||||  |
seq2  A--CTATAATATA-CTACATCACCACACATATGTTACATCCACACACAAA  1095

seq1  CACACTCACACAAGCACAACCAAC  1117
      ||||||||||| ||||| ||||||
seq2  CACACTCACAC-AGCAC-ACCAAC  1117