BAC Information

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BAC

Clone NameB6Ng01-229B09
Chromosome5 (Build37)
Map Location 151,210,463 - 151,366,450
singlet/doubletdoublet
Overlap geneFry, LOC100042068, Gm5, XM_359419, Brca2
Upstream gene6330406I15Rik, 4930588N13Rik, LOC100040037, LOC100040062, 4930434E21Rik, Hsp110, EG433968, B3galtl, LOC100040089, Rxfp2, LOC667470
Downstream geneB230342M21Rik, BC037393, Aprin, LOC100040180, Kl, LOC667510, Stard13, LOC630708, LOC625175, LOC100042166, EG435877, EG632649, EG632671
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229B09.bB6Ng01-229B09.g
ACCGA042328GA042329
length720488
definitionB6Ng01-229B09.b B6Ng01-229B09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,210,463 - 151,211,182)(151,365,957 - 151,366,450)
sequence
gaattcttcagatgttgtcttacacaatggggccttgctttgtggcgagc
accctatagtcttggcaacagcctgggttgtttggggattcctatgggtc
ccctgtggccatcaacccagttagatgtaatccaatctcagtactagaag
cctcatttggtgatgagaggtggccagttgggactcagtcccactatctg
actattttacttatatcaccttcatataatatgtgtgcatttcaggaagt
ttctactgtaataagagcttcgcatttttatgggattcccaagtgggcaa
acaaatgggtctctgattcttgtgccctctcttgggctcttttccttctg
ttggtttgtcttgtccaaattcaatatgatagattttgttttatattatt
aatattgttttatttggttatattttttaatgaataaatgaagaatgaat
gaagaatgaataaatgaatgaatggaaatctagtcactaggttaaaggtt
aacaactgaactatcacttattcttctgggaaaggggaaatcagttttcc
ccaacagagtgacactgggtgtatcaacaactccaggacaggcctcgtgc
tcaggagcagttgatcagcatataatggactctgcaggggctgggggagg
cttttatttacttacggtttagagttttgttttttgggcgcgggggtggg
gatcttgttttgggggtgtt
ttctctgctgtgcacctggcattgaacaattactcaataaatactaatgg
aatccacaaatgagctacctaccttctataacaggcagtgtgcggattca
gtgtgactcagatagcagggaatgacatggctatgtggctgatgaactta
acagctagagacaaaccccacatcagtcagctactactcaccaaacacaa
gagggaaggaaggaaggcgagcagggaaggagagtgggaggggaagggag
ggtttgcaggcacagtggaggacagaacgaaacctgtaaggaaaacacca
cagaacaaggaaattcttttttctttttcttttcttttgttttttgtttt
ttgggtttttttttgtttctcaagacaggagacagggtttcactgtatag
ccctggctgtcctggaactcactttgtagaccaggctggcctcgaactca
gaaatccacctgcctctgcctcctgagtgctgggatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_151210463_151211182
seq2: B6Ng01-229B09.b_46_765

seq1  GAATTCTTCAGATGTTGTCTTACACAATGGGGCCTTGCTTTGTGGCGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGATGTTGTCTTACACAATGGGGCCTTGCTTTGTGGCGAGC  50

seq1  ACCCTATAGTCTTGGCAACAGCCTGGGTTGTTTGGGGATTCCTATGGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTATAGTCTTGGCAACAGCCTGGGTTGTTTGGGGATTCCTATGGGTC  100

seq1  CCCTGTGGCCATCAACCCAGTTAGATGTAATCCAATCTCAGTACTAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGGCCATCAACCCAGTTAGATGTAATCCAATCTCAGTACTAGAAG  150

seq1  CCTCATTTGGTGATGAGAGGTGGCCAGTTGGGACTCAGTCCCACTATCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTTGGTGATGAGAGGTGGCCAGTTGGGACTCAGTCCCACTATCTG  200

seq1  ACTATTTTACTTATATCACCTTCATATAATATGTGTGCATTTCAGGAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTTACTTATATCACCTTCATATAATATGTGTGCATTTCAGGAAGT  250

seq1  TTCTACTGTAATAAGAGCTTCGCATTTTTATGGGATTCCCAAGTGGGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTGTAATAAGAGCTTCGCATTTTTATGGGATTCCCAAGTGGGCAA  300

seq1  ACAAATGGGTCTCTGATTCTTGTGCCCTCTCTTGGGCTCTTTTCCTTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGGGTCTCTGATTCTTGTGCCCTCTCTTGGGCTCTTTTCCTTCTG  350

seq1  TTGGTTTGTCTTGTCCAAATTCAATATGATAGATTTTGTTTTATATTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTGTCTTGTCCAAATTCAATATGATAGATTTTGTTTTATATTATT  400

seq1  AATATTGTTTTATTTGGTTATATTTTTTAATGAATAAATGAAGAATGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGTTTTATTTGGTTATATTTTTTAATGAATAAATGAAGAATGAAT  450

seq1  GAAGAATGAATAAATGAATGAATGGAAATCTAGTCACTAGGTTAAAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATGAATAAATGAATGAATGGAAATCTAGTCACTAGGTTAAAGGTT  500

seq1  AACAACTGAACTATCACTTATTCTTCTGGGAAAGGGGAAATCAGTTTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTGAACTATCACTTATTCTTCTGGGAAAGGGGAAATCAGTTTTCC  550

seq1  CCAACAGAGTGACACTGGGTGTATCAACAACTCCAGGACAGGCCTCGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGAGTGACACTGGGTGTATCAACAACTCCAGGACAGGCCTCGTGC  600

seq1  TCAGGAGCAGTTGATCAGCATATAATGGACTCTGCAGGGGCTGGGGGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGCAGTTGATCAGCATATAATGGACTCTGCAGGGGCTGGGGGAGG  650

seq1  CTTTTATTTACTTACGGTTTAGAGTTTTGTTTTTTGGGCGCGGGGGTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATTTACTTACGGTTTAGAGTTTTGTTTTTTGGGCGCGGGGGTGGG  700

seq1  GATCTTGTTTTGGGGGTGTT  720
      ||||||||||||||||||||
seq2  GATCTTGTTTTGGGGGTGTT  720

seq1: chr5_151365957_151366450
seq2: B6Ng01-229B09.g_64_557 (reverse)

seq1  TAATCCCAGCACTCAGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCAGCACTCAGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGC  50

seq1  CAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTATACAGTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTATACAGTGAA  100

seq1  ACCCTGTCTCCTGTCTTGAGAAACAAAAAAAAACCCAAAAAACAAAAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTCTCCTGTCTTGAGAAACAAAAAAAAACCCAAAAAACAAAAAAC  150

seq1  AAAAGAAAAGAAAAAGAAAAAAGAATTTCCTTGTTCTGTGGTGTTTTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAGAAAAAGAAAAAAGAATTTCCTTGTTCTGTGGTGTTTTCCT  200

seq1  TACAGGTTTCGTTCTGTCCTCCACTGTGCCTGCAAACCCTCCCTTCCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGTTTCGTTCTGTCCTCCACTGTGCCTGCAAACCCTCCCTTCCCCT  250

seq1  CCCACTCTCCTTCCCTGCTCGCCTTCCTTCCTTCCCTCTTGTGTTTGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCTCCTTCCCTGCTCGCCTTCCTTCCTTCCCTCTTGTGTTTGGTG  300

seq1  AGTAGTAGCTGACTGATGTGGGGTTTGTCTCTAGCTGTTAAGTTCATCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTAGCTGACTGATGTGGGGTTTGTCTCTAGCTGTTAAGTTCATCAG  350

seq1  CCACATAGCCATGTCATTCCCTGCTATCTGAGTCACACTGAATCCGCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATAGCCATGTCATTCCCTGCTATCTGAGTCACACTGAATCCGCACA  400

seq1  CTGCCTGTTATAGAAGGTAGGTAGCTCATTTGTGGATTCCATTAGTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGTTATAGAAGGTAGGTAGCTCATTTGTGGATTCCATTAGTATTT  450

seq1  ATTGAGTAATTGTTCAATGCCAGGTGCACAGCAGAGAAGAATTC  494
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGTAATTGTTCAATGCCAGGTGCACAGCAGAGAAGAATTC  494