BAC Information

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BAC

Clone NameB6Ng01-229F03
Chromosome5 (Build37)
Map Location 144,171,376 - 144,172,506
singlet/doubletsinglet
Overlap geneKdelr2
Upstream geneSlc29a4, Tnrc18, LOC100038954, LOC100041004, LOC100038972, LOC100038984, LOC100042525, LOC100038888, Zfp469, LOC666788, Fbxl18, D430018E03Rik, LOC100042558, Actb, Fscn1, 2810055G22Rik, LOC667809, Olfr718-ps1, LOC640324, LOC100042605, Rbak, 4933411G11Rik, Spdyb, Zfp12, Zfp316, Gm792, E130309D02Rik, Zdhhc4, Grid2ip
Downstream geneLOC231869, LOC670671, Daglb, Rac1, 2810453I06Rik, Pscd3, Usp42, Eif2ak1, 4921520G13Rik, Jtv1, Pms2, 4930526H21Rik, AU022870, Ocm, Lmtk2, Bhlhb8, 2210010N04Rik, Bri3, Baiap2l1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229F03.g
ACCGA042503
length1,128
definitionB6Ng01-229F03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattttctttcatgtcatgggcagtctcacagtatgctattctgg
ataaaactttcagagactctgaatcctactgtgtctctagcactgtaaac
agatagtgtgctctgggcttgctctgggcttggctctgggcttggccctg
ggccctaatttactaccagctggagggtgagagcctccctgagtgaacac
tggacaaaggagaagacaggcagtgtgtgcggtgggaatccacacagtaa
ctagcacctgggactctgggatgctttcagggtgcagcaaccattctctc
tagcaagtagctgcttttccctttaccaccgtgtcccatcttcacagaag
gaagcaatcgcaagctaaagatgggggcacagggtggcaggaatctcctg
ggggtaagggtggaatggaatagctgctaccttatctgtcctttgatgga
tctgcagtgctggccatcagtcattttgtctgtctacccgaaatcctgag
gatcaaacctagagcctcatgttaggcaagtaccttattactgagttaca
atcacaggcaataccaacctgactatggaccaaaagttccaatgtttgtt
ccatgtaacaagcactcacgggcacactcactgtgagcacttcagtgaca
tcctggtaccaaatccatctgacagctacactcaagagcaaaacttgtca
aatgattatcactcatgcttgtctgtccccagaagctcagtaagctttac
gaaagcacacatctccgcacttgagaccacggactttaagtggttaagag
tacatctgctcttccagaggtcctgagttcaattcccagcaaccacatgg
tggctcacaaccatctgtcatgagatccgatgccctcttctggagtgtct
gaagacagtgacactgtacttatataaactaatcttttaagaaaaaaaca
aacaaacgtcttttagtggggacaaattagcccagctgaccctgaatctg
ctatggagtcaaagctgttcttgaactttcatcctctgcttccacctctc
aggtgtggaattacagggtatgcacggcataatccagctggacattcttt
taagcctttgacctttggctggaactcc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_144171376_144172506
seq2: B6Ng01-229F03.g_68_1195 (reverse)

seq1  GGAG-TCCAGCAAAAGGTCAAAAGCTTTAAAAGAATGTCCAAGCTGGATA  49
      |||| |||||| |||||||||| || |||||||||||||| |||||||| 
seq2  GGAGTTCCAGCCAAAGGTCAAAGGC-TTAAAAGAATGTCC-AGCTGGATT  48

seq1  TGGCGGTGCATA-CCTGTAATTCCAACACCTGGAGAGGTGGAGGCAGGAG  98
        || ||||||| ||||||||||| |||||| |||||||||| ||| |||
seq2  ATGCCGTGCATACCCTGTAATTCC-ACACCT-GAGAGGTGGAAGCA-GAG  95

seq1  GATGAAAAGTTCAAGAACAGCTTTGACTCCATAGCAGATTCAGGGTCAGC  148
      |||| |||||||||||||||||||||||||||||||||||||||||||| 
seq2  GATG-AAAGTTCAAGAACAGCTTTGACTCCATAGCAGATTCAGGGTCAG-  143

seq1  CTGGGCT-ATTTGTCCCCACTAAAAGACGTTTGTTTG-TTTTTTCTTAAA  196
      ||||||| ||||||||||||||||||||||||||||| ||||||||||||
seq2  CTGGGCTAATTTGTCCCCACTAAAAGACGTTTGTTTGTTTTTTTCTTAAA  193

seq1  AGATTAGTTTATATAAGTACAGTGTCACTGTCTTCAGACACTCCAGAAGA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAGTTTATATAAGTACAGTGTCACTGTCTTCAGACACTCCAGAAGA  243

seq1  GGGCATCGGATCTCATGACAGATGGTTGTGAGCCACCATGTGGTTGCTGG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATCGGATCTCATGACAGATGGTTGTGAGCCACCATGTGGTTGCTGG  293

seq1  GAATTGAACTCAGGACCTCTGGAAGAGCAGATGTACTCTTAACCACTTAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGAACTCAGGACCTCTGGAAGAGCAGATGTACTCTTAACCACTTAA  343

seq1  AGTCCGTGGTCTCAAGTGCGGAGATGTGTGCTTTCGTAAAGCTTACTGAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCGTGGTCTCAAGTGCGGAGATGTGTGCTTTCGTAAAGCTTACTGAG  393

seq1  CTTCTGGGGACAGACAAGCATGAGTGATAATCATTTGACAAGTTTTGCTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGGGACAGACAAGCATGAGTGATAATCATTTGACAAGTTTTGCTC  443

seq1  TTGAGTGTAGCTGTCAGATGGATTTGGTACCAGGATGTCACTGAAGTGCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGTAGCTGTCAGATGGATTTGGTACCAGGATGTCACTGAAGTGCT  493

seq1  CACAGTGAGTGTGCCCGTGAGTGCTTGTTACATGGAACAAACATTGGAAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGAGTGTGCCCGTGAGTGCTTGTTACATGGAACAAACATTGGAAC  543

seq1  TTTTGGTCCATAGTCAGGTTGGTATTGCCTGTGATTGTAACTCAGTAATA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTCCATAGTCAGGTTGGTATTGCCTGTGATTGTAACTCAGTAATA  593

seq1  AGGTACTTGCCTAACATGAGGCTCTAGGTTTGATCCTCAGGATTTCGGGT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACTTGCCTAACATGAGGCTCTAGGTTTGATCCTCAGGATTTCGGGT  643

seq1  AGACAGACAAAATGACTGATGGCCAGCACTGCAGATCCATCAAAGGACAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGACAAAATGACTGATGGCCAGCACTGCAGATCCATCAAAGGACAG  693

seq1  ATAAGGTAGCAGCTATTCCATTCCACCCTTACCCCCAGGAGATTCCTGCC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGTAGCAGCTATTCCATTCCACCCTTACCCCCAGGAGATTCCTGCC  743

seq1  ACCCTGTGCCCCCATCTTTAGCTTGCGATTGCTTCCTTCTGTGAAGATGG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTGCCCCCATCTTTAGCTTGCGATTGCTTCCTTCTGTGAAGATGG  793

seq1  GACACGGTGGTAAAGGGAAAAGCAGCTACTTGCTAGAGAGAATGGTTGCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACGGTGGTAAAGGGAAAAGCAGCTACTTGCTAGAGAGAATGGTTGCT  843

seq1  GCACCCTGAAAGCATCCCAGAGTCCCAGGTGCTAGTTACTGTGTGGATTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCTGAAAGCATCCCAGAGTCCCAGGTGCTAGTTACTGTGTGGATTC  893

seq1  CCACCGCACACACTGCCTGTCTTCTCCTTTGTCCAGTGTTCACTCAGGGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCGCACACACTGCCTGTCTTCTCCTTTGTCCAGTGTTCACTCAGGGA  943

seq1  GGCTCTCACCCTCCAGCTGGTAGTAAATTAGGGCCCAGGGCCAAGCCCAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTCACCCTCCAGCTGGTAGTAAATTAGGGCCCAGGGCCAAGCCCAG  993

seq1  AGCCAAGCCCAGAGCAAGCCCAGAGCACACTATCTGTTTACAGTGCTAGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAGCCCAGAGCAAGCCCAGAGCACACTATCTGTTTACAGTGCTAGA  1043

seq1  GACACAGTAGGATTCAGAGTCTCTGAAAGTTTTATCCAGAATAGCATACT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGTAGGATTCAGAGTCTCTGAAAGTTTTATCCAGAATAGCATACT  1093

seq1  GTGAGACTGCCCATGACATGAAAGAAAATGAATTC  1131
      |||||||||||||||||||||||||||||||||||
seq2  GTGAGACTGCCCATGACATGAAAGAAAATGAATTC  1128