BAC Information

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BAC

Clone NameB6Ng01-231O13
Chromosome5 (Build37)
Map Location 132,468,536 - 132,572,604
singlet/doubletdoublet
Overlap geneAuts2
Upstream geneWbscr17, 4930563F08Rik
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231O13.bB6Ng01-231O13.g
ACCGA044379GA044380
length1,0891,166
definitionB6Ng01-231O13.b B6Ng01-231O13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,571,515 - 132,572,604)(132,468,536 - 132,469,711)
sequence
gaattcatttgttttagttctacatataattaagaacatccagtgtttgt
ctttctgtactcggtatatttaattaagttgagtattctttaattgtatc
catgctgctgtaaatggtaggaatttctttttaaaggttaaatagtattt
cattaaatatattcaacatcttttaaaaatctatttgccttttaaattta
cagtttaatgaagttttttttctgttttttttttaagatacggtttttct
atattgccctggttgtcctggaataaagtttcattaaaaaaaaagattta
gtttatttttaagtatacctatatgtatgtatgtgccatatgtatgttta
tgcctcagaagtccagaaaagactgtcagatcaccaagacctagagtcgc
aaactgctttgagctacctcatgtggctgttgagaactaaactgaggtcc
tgtgtaaagggtaatatttgcttttaacagctgagccagctctccatccc
tatgtagtttaacttacaattttcatttttcagatctataacccagtaaa
taatttacaggatcttaaaagttttcctctagtacaaagcactttacagg
actggtcttttgtgactcatttgtctcttctcctcccagaactgtattct
ggtcttacagcccaccatagcaaggttacaggaatcagggcacagtgagg
aggctggctgactcatacggtcctgccagatctgatgcaggatcttccag
ttcccatgcagtgatactcagttttacgttattcaagaacagggtgttag
ggacgggagaggaaaggtacaacttaacattcttaggatactttcccatc
accgcctctaaacaaagaattgtcagcaaagcagtgagtcctctaaagac
tgaggcttctcagccattccatattcctcagttaagaatttctttgttta
gctttgtaccccatttttaatagggttttctttggtctaactttcttgag
ttctttgtcatcaggaaatgcaatcaaaaccacgtgagattccacctcaa
tacccgtcagatgctaagatcagatgaccgccagatgct

gaattcactcctgcctctcttccgaagacctgtactttcctactctgttt
gttattcttcgaatgataaagtattttcttccattttagggctgagctgc
gacagggcagcttgggaaataattcaaagcagagtgagaaactcgtgcca
acccctgatgtttttcttcagctacagaaatgcaatcggataacttattt
ttgagaatctgaagtttattaggctggtatttattttggtttccctggag
ggtacaattatgttttagaaagacctgtggctgagagactctcacaataa
actatttctatgctaaccacatggaccagaggagtgaagaaagcctcctt
ttgtatagtgcgttgcggtggcttcggcgcttctttcctggtagcgacag
cctggtcttggtgctccagttcctctgaccgctacccaccctagaaaatt
tttacaaaagctgcatctgaaggagtctgaaaggagataaatgccaccat
gacagactcttcttgcccaaccgcagcattaatcccagcatttgccatga
gaattatatgccaaacttggtaacaagctgggcagagctggttttgaggg
catgccattccctctagagcaaaaaaaaaaaaaaaaaaaaaaaggcagac
taaactcagagatcgactttcataagaaaggttcctttgttctgctaagt
tcctgtctccgatttctgtttctgaacaaattctactgcacaaggtgagt
ccacgggccaagaagacaggtcgttttcagagctgtggaaaggcaagctt
aagatttgtagcaaacctctgccaaattaatgtgagattaaaaaaaaata
tgcacatgggggttggggagatgggatccatcaataaagtgcctgctttt
gtaagcatgaggacatgttgcataatgctcagaaaccattgtataaatag
ctagattatggtataatcaccagcataggaggaagttagaagaacaggcg
gctccctgggctagtggagccaggtacagccgacataggaatgtgtgtca
tgaaggatttggttaaaaaaaaaagtgagtagtgatccctccagaagaaa
ctgaccagtggacatgtgatcacacactaatccaatgtctcatggaagcc
tgacttgggttagcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_132571515_132572604
seq2: B6Ng01-231O13.b_45_1133 (reverse)

seq1  AGCATCT-GCTGTCATCTGATCTTAGCCATTCTGACGGGTA-TGAGGTGG  48
      ||||||| || ||||||||||||||||   ||||||||||| ||||||||
seq2  AGCATCTGGCGGTCATCTGATCTTAGC--ATCTGACGGGTATTGAGGTGG  48

seq1  AATCTCACCGTTGTTTTGATTTGCATTTCCCTGATGACAAAGAACTCAAG  98
      ||||||| ||| ||||||| |||||||| |||||||||||||||||||||
seq2  AATCTCA-CGTGGTTTTGA-TTGCATTT-CCTGATGACAAAGAACTCAAG  95

seq1  -AAGTTAGACCAAAGAAAACCCTATTAAAAATGGGGTACAAAGCTAAACA  147
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTAGACCAAAGAAAACCCTATTAAAAATGGGGTACAAAGCTAAACA  145

seq1  AAG-AATTCTTAACTGAGGAATATGGAATGGCTGAGAAGCCTCAGTCTTT  196
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATTCTTAACTGAGGAATATGGAATGGCTGAGAAGCCTCAGTCTTT  195

seq1  AGAGGACTCACTGCTTTGCTGACAATTCTTTGTTTAGAGGCGGTGATGGG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACTCACTGCTTTGCTGACAATTCTTTGTTTAGAGGCGGTGATGGG  245

seq1  AAAGTATCCTAAGAATGTTAAGTTGTACCTTTCCTCTCCCGTCCCTAACA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATCCTAAGAATGTTAAGTTGTACCTTTCCTCTCCCGTCCCTAACA  295

seq1  CCCTGTTCTTGAATAACGTAAAACTGAGTATCACTGCATGGGAACTGGAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTCTTGAATAACGTAAAACTGAGTATCACTGCATGGGAACTGGAA  345

seq1  GATCCTGCATCAGATCTGGCAGGACCGTATGAGTCAGCCAGCCTCCTCAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTGCATCAGATCTGGCAGGACCGTATGAGTCAGCCAGCCTCCTCAC  395

seq1  TGTGCCCTGATTCCTGTAACCTTGCTATGGTGGGCTGTAAGACCAGAATA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCTGATTCCTGTAACCTTGCTATGGTGGGCTGTAAGACCAGAATA  445

seq1  CAGTTCTGGGAGGAGAAGAGACAAATGAGTCACAAAAGACCAGTCCTGTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTGGGAGGAGAAGAGACAAATGAGTCACAAAAGACCAGTCCTGTA  495

seq1  AAGTGCTTTGTACTAGAGGAAAACTTTTAAGATCCTGTAAATTATTTACT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTTTGTACTAGAGGAAAACTTTTAAGATCCTGTAAATTATTTACT  545

seq1  GGGTTATAGATCTGAAAAATGAAAATTGTAAGTTAAACTACATAGGGATG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTATAGATCTGAAAAATGAAAATTGTAAGTTAAACTACATAGGGATG  595

seq1  GAGAGCTGGCTCAGCTGTTAAAAGCAAATATTACCCTTTACACAGGACCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCTGGCTCAGCTGTTAAAAGCAAATATTACCCTTTACACAGGACCT  645

seq1  CAGTTTAGTTCTCAACAGCCACATGAGGTAGCTCAAAGCAGTTTGCGACT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTAGTTCTCAACAGCCACATGAGGTAGCTCAAAGCAGTTTGCGACT  695

seq1  CTAGGTCTTGGTGATCTGACAGTCTTTTCTGGACTTCTGAGGCATAAACA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTCTTGGTGATCTGACAGTCTTTTCTGGACTTCTGAGGCATAAACA  745

seq1  TACATATGGCACATACATACATATAGGTATACTTAAAAATAAACTAAATC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATGGCACATACATACATATAGGTATACTTAAAAATAAACTAAATC  795

seq1  TTTTTTTTTAATGAAACTTTATTCCAGGACAACCAGGGCAATATAGAAAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTAATGAAACTTTATTCCAGGACAACCAGGGCAATATAGAAAA  845

seq1  ACCGTATCTTAAAAAAAAAACAGAAAAAAAACTTCATTAAACTGTAAATT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTATCTTAAAAAAAAAACAGAAAAAAAACTTCATTAAACTGTAAATT  895

seq1  TAAAAGGCAAATAGATTTTTAAAAGATGTTGAATATATTTAATGAAATAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGGCAAATAGATTTTTAAAAGATGTTGAATATATTTAATGAAATAC  945

seq1  TATTTAACCTTTAAAAAGAAATTCCTACCATTTACAGCAGCATGGATACA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAACCTTTAAAAAGAAATTCCTACCATTTACAGCAGCATGGATACA  995

seq1  ATTAAAGAATACTCAACTTAATTAAATATACCGAGTACAGAAAGACAAAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGAATACTCAACTTAATTAAATATACCGAGTACAGAAAGACAAAC  1045

seq1  ACTGGATGTTCTTAATTATATGTAGAACTAAAACAAATGAATTC  1090
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGATGTTCTTAATTATATGTAGAACTAAAACAAATGAATTC  1089


seq1: chr5_132468536_132469711
seq2: B6Ng01-231O13.g_69_1234

seq1  GAATTCACTCCTGCCTCTCTTCCGAAGACCTGTACTTTCCTACTCTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCCTGCCTCTCTTCCGAAGACCTGTACTTTCCTACTCTGTTT  50

seq1  GTTATTCTTCGAATGATAAAGTATTTTCTTCCATTTTAGGGCTGAGCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTCTTCGAATGATAAAGTATTTTCTTCCATTTTAGGGCTGAGCTGC  100

seq1  GACAGGGCAGCTTGGGAAATAATTCAAAGCAGAGTGAGAAACTCGTGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGCAGCTTGGGAAATAATTCAAAGCAGAGTGAGAAACTCGTGCCA  150

seq1  ACCCCTGATGTTTTTCTTCAGCTACAGAAATGCAATCGGATAACTTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTGATGTTTTTCTTCAGCTACAGAAATGCAATCGGATAACTTATTT  200

seq1  TTGAGAATCTGAAGTTTATTAGGCTGGTATTTATTTTGGTTTCCCTGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAATCTGAAGTTTATTAGGCTGGTATTTATTTTGGTTTCCCTGGAG  250

seq1  GGTACAATTATGTTTTAGAAAGACCTGTGGCTGAGAGACTCTCACAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAATTATGTTTTAGAAAGACCTGTGGCTGAGAGACTCTCACAATAA  300

seq1  ACTATTTCTATGCTAACCACATGGACCAGAGGAGTGAAGAAAGCCTCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTCTATGCTAACCACATGGACCAGAGGAGTGAAGAAAGCCTCCTT  350

seq1  TTGTATAGTGCGTTGCGGTGGCTTCGGCGCTTCTTTCCTGGTAGCGACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATAGTGCGTTGCGGTGGCTTCGGCGCTTCTTTCCTGGTAGCGACAG  400

seq1  CCTGGTCTTGGTGCTCCAGTTCCTCTGACCGCTACCCACCCTAGAAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTCTTGGTGCTCCAGTTCCTCTGACCGCTACCCACCCTAGAAAATT  450

seq1  TTTACAAAAGCTGCATCTGAAGGAGTCTGAAAGGAGATAAATGCCACCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAAAGCTGCATCTGAAGGAGTCTGAAAGGAGATAAATGCCACCAT  500

seq1  GACAGACTCTTCTTGCCCAACCGCAGCATTAATCCCAGCATTTGCCATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACTCTTCTTGCCCAACCGCAGCATTAATCCCAGCATTTGCCATGA  550

seq1  GAATTATATGCCAAACTTGGTAACAAGCTGGGCAGAGCTGGTTTTGAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATATGCCAAACTTGGTAACAAGCTGGGCAGAGCTGGTTTTGAGGG  600

seq1  CATGCCATTCCCTCTAGAGCAAAAAAAAAAAAAAAAAAAAAAAGGCAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCATTCCCTCTAGAGCAAAAAAAAAAAAAAAAAAAAAAAGGCAGAC  650

seq1  TAAACTCAGAGATCGACTTTCATAAGAAAGGTTCCTTTGTTCTGCTAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCAGAGATCGACTTTCATAAGAAAGGTTCCTTTGTTCTGCTAAGT  700

seq1  TCCTGTCTCCGATTTCTGTTTCTGAACAAATTCTACTGCACAAGGTGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCTCCGATTTCTGTTTCTGAACAAATTCTACTGCACAAGGTGAGT  750

seq1  CCACGGGCCAAGAAGACAGGTCGTTTTCAGAGCTGTGGAAAGGCAAGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGGGCCAAGAAGACAGGTCGTTTTCAGAGCTGTGGAAAGGCAAGCTT  800

seq1  AAGATTTGTAGCAAACCTCTGCCAAATTAATGTGAGATTAAAAAAAAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTGTAGCAAACCTCTGCCAAATTAATGTGAGATTAAAAAAAAATA  850

seq1  TGCACATGGGGGTTGGGGAGAT-GGATCCATCAATAAAGTGCCTGC-TTT  898
      |||||||||||||||||||||| ||||||||||||||||||||||| |||
seq2  TGCACATGGGGGTTGGGGAGATGGGATCCATCAATAAAGTGCCTGCTTTT  900

seq1  GTAAGCATGAGGACATG-TGCATAATGCTCAGAAACCA-TGTATAAAATA  946
      ||||||||||||||||| |||||||||||||||||||| ||||| |||||
seq2  GTAAGCATGAGGACATGTTGCATAATGCTCAGAAACCATTGTAT-AAATA  949

seq1  GCTAGA-TATGGTATTAATCACCAGCATA-GAGGAAG-TAGA--GACAAG  991
      |||||| ||||||| |||||||||||||| ||||||| ||||   ||| |
seq2  GCTAGATTATGGTA-TAATCACCAGCATAGGAGGAAGTTAGAAGAACAGG  998

seq1  CGGCTCCCTGGGCTAGTTGGAGCCAGGGGACAGCCGACATAGGAAATGTG  1041
      |||||||||||||||| |||||||| || |||||||||||||| ||||||
seq2  CGGCTCCCTGGGCTAG-TGGAGCCA-GGTACAGCCGACATAGG-AATGTG  1045

seq1  GCCAATGAAAGATTTTGTTTAAAAAAAAAAAAGTGAGTAGTGGAACCCCC  1091
          ||||| ||||| |||   ||||||||||||||||||||     |||
seq2  TGTCATGAAGGATTTGGTT---AAAAAAAAAAGTGAGTAGTG---ATCCC  1089

seq1  TCCCAAGAAGAACATGAACACATGTGAACATGTGTACACACACTAATCCA  1141
      |||  |||||||  ||| ||   ||| |||||||  ||||||||||||||
seq2  TCC--AGAAGAAACTGACCA---GTGGACATGTGATCACACACTAATCCA  1134

seq1  CATG-CTCACAGGAAGCCTGACATGGGTTTTAGCAC  1176
       ||| ||||  ||||||||||| ||||  |||||||
seq2  -ATGTCTCA-TGGAAGCCTGACTTGGG--TTAGCAC  1166


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