BAC Information

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BAC

Clone NameB6Ng01-232B19
Chromosome5 (Build37)
Map Location 78,661,499 - 78,662,382
singlet/doubletsinglet
Overlap geneLOC100039398
Upstream geneRest, 2610024G14Rik, Polr2b, Igfbp7, Pea15b, LOC669227
Downstream geneMthfr-ps1, EG384187
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232B19.bB6Ng01-232B19.g
ACCGA044529GA044530
length1,252933
definitionB6Ng01-232B19.b B6Ng01-232B19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttctttgtcccttattcactttacatcccactcactgccctcc
tcttggtcacccctcccacagttctcctgccatcctcctcctccccttct
cctctgaatgagtagaggccctgcttggcttctcccctccccccatcccc
acccccaacctgaccctgacacatcaagtctctgtgaggctaggaccatt
ctctcccactgaagtcatacaaggcagcccagatgaaagaatatatccta
tggacaggcaacagcttttgaggtagccccataccagttgttcggggccc
acatgaaaaccaagcttcacatctgctaagcataccccaggaggcctagg
tccagcctatgtgtgctctttggttagtggctcagcctctgagagccaca
aatgtccaggttatttgattctattggtcttcctgtggagttcctatccc
ctccagggccacaatccttcctcctattctttcataaaagcctccaagct
ctactcagtgattggctgtggatatctgcatcagtcttagtcagctgctg
ggagagagggctctgagaggacagccatgttaaactcctgtttgaaaaca
taacagagtatcattaatagtgtcaaggaatgatactggcccatgggatg
ggtctcaagtgtggcaggtttattagttgactatttgctcagtctctgct
ccaacccctgtctctgtacttcttgtagacaggataacatttgggttgaa
agattttctgggtgggttggtgtccctatcacacttttggggttccttgt
ctggatagaggaggtgcccttcttcaagtttccatatatccaacattgtg
aagcacagctaacaatcccacttgattcttgcaccacatttagaaattgg
aggaattctttaacatgtcactaacattttctcaaactcattattggagt
ttcctagtcctccaggaaatctttcaatcagtgttctacacaagctagtg
tatttgcaccatcagtggaatctagaagtgttagttactaaaaattttca
agcaagtggggaattcagaattgggatcaagtacagtataaaccttcttt
gtagaacccattgcttgaaaaaaaattaataatgggcagaacctgctgaa
gttcaggccctgcacattcgctcttcagcttcaaaaagatgttaagaacg
accctactggctcaaatactagatcgcaataagaatgagagtctgctgtc
ga
gaattccatatgcatatactaaagcagttcagtgacttacaagagaaaac
aggcagcagtgtatatgttcagctgctagtgaagtaaaattgcaagttaa
aaccatgtaagtagtacagggtgcatatgatcaaagcatataagctatat
catagcagaactcattaatgtatatagttgtgatggtttgtctattctta
ggccagggagtggcacaatttggagtgtggccttgttcaaataggtgtga
ccaggttggagtagttgtgtcactgtgggtgtgggcttaagatcctcacc
ctagttgcctggaagtcagtcttccactagcagcttttggatggagacat
agaactttcagttcctccagcaccatgcctgcctggatactgccatgctc
ccaccttgatgataatggactgaacctctgaacctgtaagccaggaccaa
ttaaatgttgctttttatttttttattattattttttttattttaagagt
cagaggaccagtaagtttattgtgacattttgccttctagaaatgacaga
atggctacaggtatagtacttttgaaataaaacttgagcaatgataacac
aaagagatatgctaactgtcttagttagggtttaactgctattttttatt
aggtattttcctcatttacattttccaatgctatcccaaaagtcccccat
acccaccccctcactccactacccatccagtccccctttttggtcctggc
gttcccctgtactgggggcatataaagtttgcaagtccaatgggtctctc
ttttccagtgatggctgacttaggtcatcttttgatacatatgcagctag
agacaagagctacagggtactggttagttcatattgttgatcccacctat
agggtgcagaaccctttagttcccttggggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_78661499_78662382
seq2: B6Ng01-232B19.g_67_954

seq1  GAATTCCATATGCATATACTAAAGCAGTTCAGTGACTTACAAGAGAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATGCATATACTAAAGCAGTTCAGTGACTTACAAGAGAAAAC  50

seq1  AGGCAGCAGTGTATATGTTCAGCTGCTAGTGAAGTAAAATTGCAAGTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCAGTGTATATGTTCAGCTGCTAGTGAAGTAAAATTGCAAGTTAA  100

seq1  AACCATGTAAGTAGTACAGGGTGCATATGATCAAAGCATATAAGCTATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGTAAGTAGTACAGGGTGCATATGATCAAAGCATATAAGCTATAT  150

seq1  CATAGCAGAACTCATTAATGTATATAGTTGTGATGGTTTGTCTATTCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCAGAACTCATTAATGTATATAGTTGTGATGGTTTGTCTATTCTTA  200

seq1  GGCCAGGGAGTGGCACAATTTGGAGTGTGGCCTTGTTCAAATAGGTGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGGGAGTGGCACAATTTGGAGTGTGGCCTTGTTCAAATAGGTGTGA  250

seq1  CCAGGTTGGAGTAGTTGTGTCACTGTGGGTGTGGGCTTAAGATCCTCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTTGGAGTAGTTGTGTCACTGTGGGTGTGGGCTTAAGATCCTCACC  300

seq1  CTAGTTGCCTGGAAGTCAGTCTTCCACTAGCAGCTTTTGGATGGAGACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTGCCTGGAAGTCAGTCTTCCACTAGCAGCTTTTGGATGGAGACAT  350

seq1  AGAACTTTCAGTTCCTCCAGCACCATGCCTGCCTGGATACTGCCATGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTTCAGTTCCTCCAGCACCATGCCTGCCTGGATACTGCCATGCTC  400

seq1  CCACCTTGATGATAATGGACTGAACCTCTGAACCTGTAAGCCAGGACCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTTGATGATAATGGACTGAACCTCTGAACCTGTAAGCCAGGACCAA  450

seq1  TTAAATGTTGCTTTTTATTTTTTTATTATTATTTTTTTTATTTTAAGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGTTGCTTTTTATTTTTTTATTATTATTTTTTTTATTTTAAGAGT  500

seq1  CAGAGGACCAGTAAGTTTATTGTGACATTTTGCCTTCTAGAAATGACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGACCAGTAAGTTTATTGTGACATTTTGCCTTCTAGAAATGACAGA  550

seq1  ATGGCTACAGGTATAGTACTTTTGAAATAAAACTTGAGCAATGATAACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTACAGGTATAGTACTTTTGAAATAAAACTTGAGCAATGATAACAC  600

seq1  AAAGAGATATGCTAACTGTCTTAGTTAGGGTTTAACTGCTATTTTTTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGATATGCTAACTGTCTTAGTTAGGGTTTAACTGCTATTTTTTATT  650

seq1  AGGTATTTTCCTCATTTACA-TTTCCAATGCTATCCCAAAAGTCCCCCAT  699
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGGTATTTTCCTCATTTACATTTTCCAATGCTATCCCAAAAGTCCCCCAT  700

seq1  ACCCACCCCCTCACTCCACTACCCATCCAGTCCCCCTTTTTGGTCCTGGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACCCCCTCACTCCACTACCCATCCAGTCCCCCTTTTTGGTCCTGGC  750

seq1  GTTCCCCTGTACT-GGGGCATATAAAGTTTGCAAGTCCAATGGGTCTCTC  798
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTTCCCCTGTACTGGGGGCATATAAAGTTTGCAAGTCCAATGGGTCTCTC  800

seq1  -TTTCCAGTGATGGCTGAC-TAGGTCATCTTTTGATACATATGCAGCTAG  846
       |||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTTTCCAGTGATGGCTGACTTAGGTCATCTTTTGATACATATGCAGCTAG  850

seq1  AGACAAGAGCTACAGGGTACTGGTTAGTTCATATTGTT  884
      ||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGAGCTACAGGGTACTGGTTAGTTCATATTGTT  888