BAC Information

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BAC

Clone NameB6Ng01-232D16
Chromosome5 (Build37)
Map Location 50,535,495 - 50,536,613
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041659, EG433885, LOC666223, Gpr125
Downstream geneEG637307, LOC100041015, LOC242987, EG624734, LOC666265
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232D16.bB6Ng01-232D16.g
ACCGA044619GA044620
length1,1281,179
definitionB6Ng01-232D16.b B6Ng01-232D16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaacaaatgtagtcttaagagggttagcagtgcagttctttttt
tttttttttgctttcaatttaatttaattattattatttttcttttgcac
tgtagggaggtgaaacccagggtgtcaaataaactaaacatgcattcaag
cattcagccatactcacccccagcccttgttttctggtgtttctaacagt
aagctcatgtgtgtggataggcctttgtgttaatagattgacgtttaaat
gagcccagtttgtcatgtttgccaatctctagagtttgacaccattgaat
gtgaagatgtgaggagaagtggaccatttctgcagctttcaagcaaggaa
actcaggtaaacgtcactgcagcatgcacattatctttctgtgtatcagt
ttcactatgggggttttgagagtctgctcataggacagattttcctttgt
ttttcaccagaacctggaactaatcctaaggtcaggccactttttggtaa
cctcttagtgttggaatatttatactgttttaaaattaaaatttatttga
agattacttctttttgttgttgctatattttcattttttaaaaatgtgtc
aggttatttttgtacacacttactggaaacattggggatttttgtttttt
gtttttgttttttgttttttgtgtgtctgtatatatctgagtatatgtat
gtacatttgcatgtgggtgttgtgtgcatacatatgtccatgcttataga
gagacaaaaggttggaaagtgaggtttgctctgacctttagtcaggacag
gtttattcattgtcagtgggtactttttcatccatgtatgcagatgccag
aatgcttacagaagaagatgggaatggtcccttatagaggtgaaatgatg
tctgcttttttctctgaaaacacactgctttccatgccactaaacctact
ggttcaaaatgggggcctaaagactgggaccaaaaaattcagctacaggc
actggtgtatgggccttctgtagactattgttggactatatttgcatata
ttaccattttatggaatgtgggaagagtctttaaaattatttctatcttg
gtggtaggttggttaatggtagaagaag
gaattctcacctgaggaatactgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaattaaaacaaccctgagat
cccacttcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaagaacactcctccattgttggtc
ggattgcaggcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaagaatggatacagaaaatggggtacatttacagaatg
gagtacccctcagctattaaaaagattgaatttatgaaattactagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccggggatccaccccataatc
agcatccaaatgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggagagctagagaaagaaccaagagctaaaggatctgcacctatcgtg
atacatatgactaaccagtaccctgaggcttcttgactctagctgcatat
gtatcaaagatggcctagtcagcattcactgaaagaaagaacattggaca
gtacctttaattgcctcagttaagatcctagcctaacggccgactcgcgt
cggctacgggtagtgcttccaatctgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_50535495_50536613
seq2: B6Ng01-232D16.b_44_1171

seq1  GAATTCAAACAAATGTAGTCTTAAGAGGGTTAGCAGTGCAGTTCTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACAAATGTAGTCTTAAGAGGGTTAGCAGTGCAGTTCTTTTTT  50

seq1  TTTTTTTTTGCTTTCAATTTAATTTAATTATTATTATTTTTCTTTTGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTGCTTTCAATTTAATTTAATTATTATTATTTTTCTTTTGCAC  100

seq1  TGTAGGGAGGTGAAACCCAGGGTGTCAAATAAACTAAACATGCATTCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGGAGGTGAAACCCAGGGTGTCAAATAAACTAAACATGCATTCAAG  150

seq1  CATTCAGCCATACTCACCCCCAGCCCTTGTTTTCTGGTGTTTCTAACAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGCCATACTCACCCCCAGCCCTTGTTTTCTGGTGTTTCTAACAGT  200

seq1  AAGCTCATGTGTGTGGATAGGCCTTTGTGTTAATAGATTGACGTTTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCATGTGTGTGGATAGGCCTTTGTGTTAATAGATTGACGTTTAAAT  250

seq1  GAGCCCAGTTTGTCATGTTTGCCAATCTCTAGAGTTTGACACCATTGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCAGTTTGTCATGTTTGCCAATCTCTAGAGTTTGACACCATTGAAT  300

seq1  GTGAAGATGTGAGGAGAAGTGGACCATTTCTGCAGCTTTCAAGCAAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGATGTGAGGAGAAGTGGACCATTTCTGCAGCTTTCAAGCAAGGAA  350

seq1  ACTCAGGTAAACGTCACTGCAGCATGCACATTATCTTTCTGTGTATCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGTAAACGTCACTGCAGCATGCACATTATCTTTCTGTGTATCAGT  400

seq1  TTCACTATGGGGGTTTTGAGAGTCTGCTCATAGGACAGATTTTCCTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTATGGGGGTTTTGAGAGTCTGCTCATAGGACAGATTTTCCTTTGT  450

seq1  TTTTCACCAGAACCTGGAACTAATCCTAAGGTCAGGCCACTTTTTGGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACCAGAACCTGGAACTAATCCTAAGGTCAGGCCACTTTTTGGTAA  500

seq1  CCTCTTAGTGTTGGAATATTTATACTGTTTTAAAATTAAAATTTATTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTAGTGTTGGAATATTTATACTGTTTTAAAATTAAAATTTATTTGA  550

seq1  AGATTACTTCTTTTTGTTGTTGCTATATTTTCATTTTTTAAAAATGTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTACTTCTTTTTGTTGTTGCTATATTTTCATTTTTTAAAAATGTGTC  600

seq1  AGGTTATTTTTGTACACACTTACTGGAAACATTGGGGATTTTTGTTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTATTTTTGTACACACTTACTGGAAACATTGGGGATTTTTGTTTTTT  650

seq1  GTTTTTGTTTTTTGTTTTTTGTGTGTCTGTATATATCTGAGTATATGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGTTTTTTGTTTTTTGTGTGTCTGTATATATCTGAGTATATGTAT  700

seq1  GTACATTTGCATGTGGGTGTTGTGTGCATACATATGTCCATGCTTATAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTTGCATGTGGGTGTTGTGTGCATACATATGTCCATGCTTATAGA  750

seq1  GAGACAAAAGGTTGGAAAGTGAGGTTTGCTCTGACCTTTAGTCAGGACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAAAAGGTTGGAAAGTGAGGTTTGCTCTGACCTTTAGTCAGGACAG  800

seq1  GTTTATTCATTGTCAGTGGGTACTTTTTCATCCATGTATGCAGATGCCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTCATTGTCAGTGGGTACTTTTTCATCCATGTATGCAGATGCCAG  850

seq1  AATGCTTACAGAAGAAGAT-GGAATGGTCCCTTATAGAGGTGAAATGATG  899
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AATGCTTACAGAAGAAGATGGGAATGGTCCCTTATAGAGGTGAAATGATG  900

seq1  TCTGC--TTTTCTCTGAAAACACACTGC-TTCCATGCCACTAAACCTAAC  946
      |||||  ||||||||||||||||||||| |||||||||||||||||| ||
seq2  TCTGCTTTTTTCTCTGAAAACACACTGCTTTCCATGCCACTAAACCT-AC  949

seq1  TGGTTCAAAAT-GGGGCCTAGAGACTGGGACCAAAAAAATTCAGCTACAA  995
      ||||||||||| |||||||| ||||||||||| ||||||||||||||| |
seq2  TGGTTCAAAATGGGGGCCTAAAGACTGGGACC-AAAAAATTCAGCTAC-A  997

seq1  GGCACTGGTGTATGGG-CTTCTGTTAGACTATTGTTTGACTATA-TTGCA  1043
      |||||||||||||||| |||||| |||||||||||| ||||||| |||||
seq2  GGCACTGGTGTATGGGCCTTCTG-TAGACTATTGTTGGACTATATTTGCA  1046

seq1  TATA-TACCA-TTTATTGAAAATGTG-AGAGTC-TTAAAATTATTTCTA-  1088
      |||| ||||| ||||| |||  || | |||||| ||||||||||||||| 
seq2  TATATTACCATTTTATGGAATGTGGGAAGAGTCTTTAAAATTATTTCTAT  1096

seq1  CTGTGT-GTAGGTT-GTTAATGTTAGAGAGAAG  1119
      ||  || ||||||| ||||||| |||| |||||
seq2  CTTGGTGGTAGGTTGGTTAATGGTAGA-AGAAG  1128