MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-233K21
Chromosome	5 (Build37)
Map Location	78,050,235 - 78,155,375
singlet/doublet	doublet
Overlap gene	LOC669227
Upstream gene	Cep135, LOC100039117, A730089K16Rik, LOC665107, LOC100039299, C530008M17Rik, A230062G08Rik, Ppat, LOC664998, Paics, Srp72, Arl9, 1700023E05Rik, Hod, Spink2, Rest, 2610024G14Rik, Polr2b, Igfbp7, Pea15b
Downstream gene	LOC100039398, Mthfr-ps1, EG384187
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cep135 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381644 MGI:2681869
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039117 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039117
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	A730089K16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320411 MGI:2443970
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs

name	LOC665107 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665107
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100039299 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039299
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	C530008M17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320827 MGI:2444817
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 92 ESTs, 2 Proteins

name	A230062G08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231326 MGI:2442517
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppat (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231327 MGI:2387203
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 253 ESTs, 4 Proteins

name	LOC664998 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664998
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Paics (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67054 MGI:1914304
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Srp72 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66661 MGI:1333795
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arl9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384185 MGI:1915496
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700023E05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71868 MGI:1919118
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hod (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74318 MGI:1916782
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spink2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69982 MGI:1917232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rest (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19712 MGI:104897
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2610024G14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56412 MGI:1914306
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Polr2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231329 MGI:2388280
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Igfbp7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:29817 MGI:1352480
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pea15b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231332 MGI:3525016
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 1 Protein

name	LOC669227 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:669227
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100039398 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039398
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Mthfr-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:387594 MGI:2384077
definition	note : 5,10-methylenetetrahydrofolate reductase, pseudogene 1 pseudo : _no_value

name	EG384187 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384187 MGI:3643571
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	Cep135 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373055 GeneID:381644 MGI:2681869
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centrosomal protein 135 transcript_id : NM_199032.2

name	LOC100039117 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253972 GeneID:100039117
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100039117 transcript_id : XM_001472400.1

name	LOC100039299 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253980 GeneID:100039299
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to reproductive homeobox on X chromosome 8 transcript_id : XM_001472627.1

name	C530008M17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374875 GeneID:320827 MGI:2444817
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 92 ESTs, 2 Proteins product : RIKEN cDNA C530008M17 gene, transcript variant 1 transcript_id : XM_287460.6

name	A230062G08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351537 GeneID:231326 MGI:2442517
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A230062G08 gene transcript_id : NM_173765.2

name	Ppat (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253975 GeneID:231327 MGI:2387203
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 253 ESTs, 3 Proteins product : phosphoribosyl pyrophosphate amidotransferase, transcript variant 5 transcript_id : XM_973973.2

name	Ppat (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253976 GeneID:231327 MGI:2387203
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 233 ESTs, 2 Proteins product : phosphoribosyl pyrophosphate amidotransferase, transcript variant 4 transcript_id : XM_973937.2

name	Ppat (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253977 GeneID:231327 MGI:2387203
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 164 ESTs, 1 Protein product : phosphoribosyl pyrophosphate amidotransferase, transcript variant 3 transcript_id : XM_896000.3

name	LOC664998 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94374858 GeneID:664998
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical LOC664998 transcript_id : XM_974119.1

name	Paics (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981122 GeneID:67054 MGI:1914304
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase transcript_id : NM_025939.2

name	Srp72 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118344451 GeneID:66661 MGI:1333795
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : signal recognition particle 72 transcript_id : NM_025691.1

name	Arl9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46049038 GeneID:384185 MGI:1915496
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor-like 9 transcript_id : NM_206935.1

name	1700023E05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037270 GeneID:71868 MGI:1919118
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700023E05 gene transcript_id : NM_027970.1

name	Hod (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31559868 GeneID:74318 MGI:1916782
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeobox only domain transcript_id : NM_175606.2

name	Spink2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366833 GeneID:69982 MGI:1917232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine peptidase inhibitor, Kazal type 2 transcript_id : NM_183284.2

name	Rest (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859605 GeneID:19712 MGI:104897
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RE1-silencing transcription factor transcript_id : NM_011263.1

name	2610024G14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130590 GeneID:56412 MGI:1914306
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2610024G14 gene transcript_id : NM_019836.2

name	Polr2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24418910 GeneID:231329 MGI:2388280
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polymerase (RNA) II (DNA directed) polypeptide B transcript_id : NM_153798.1

name	Igfbp7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62990156 GeneID:29817 MGI:1352480
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin-like growth factor binding protein 7 transcript_id : NM_008048.2

name	EG384187 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51711147 GeneID:384187 MGI:3643571
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : predicted gene, EG384187 transcript_id : XM_357475.2

name	Cep135 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39841057 CCDS:CCDS19365.1 GeneID:381644 MGI:2681869
definition	codon_start : 1 product : centrosomal protein 4 protein_id : NP_950197.1

name	LOC100039117 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253973 GeneID:100039117
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472450.1

name	LOC100039299 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253981 GeneID:100039299
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472677.1

name	C530008M17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374876 GeneID:320827 MGI:2444817
definition	codon_start : 1 product : hypothetical protein LOC320827 isoform 1 protein_id : XP_287460.5

name	A230062G08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30348962 CCDS:CCDS19366.1 GeneID:231326 MGI:2442517
definition	EC_number : 1.2.1.31 GO_function : GO:0048037 - cofactor binding [Evidence IEA]; GO:0004043 - L-aminoadipate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : 2-aminoadipic 6-semialdehyde dehydrogenase product : RIKEN cDNA A230062G08 protein_id : NP_776126.1

name	Ppat (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374854 GeneID:231327 MGI:2387203
definition	codon_start : 1 product : phosphoribosyl pyrophosphate amidotransferase isoform 5 protein_id : XP_979067.1

name	Ppat (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374856 GeneID:231327 MGI:2387203
definition	codon_start : 1 product : phosphoribosyl pyrophosphate amidotransferase isoform 4 protein_id : XP_979031.1

name	Ppat (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82897714 GeneID:231327 MGI:2387203
definition	codon_start : 1 product : phosphoribosyl pyrophosphate amidotransferase isoform 3 protein_id : XP_901093.1

name	LOC664998 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94374859 GeneID:664998
definition	codon_start : 1 product : hypothetical protein protein_id : XP_979213.1

name	Paics (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385434 CCDS:CCDS19367.1 GeneID:67054 MGI:1914304
definition	GO_component : GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]; GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA] GO_process : GO:0006189 - 'de novo' IMP biosynthesis [Evidence IEA]; GO:0006164 - purine nucleotide biosynthesis [Evidence IEA] codon_start : 1 product : phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase protein_id : NP_080215.1

name	Srp72 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118344452 GeneID:66661 MGI:1333795
definition	GO_component : GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005786 - signal recognition particle (sensu Eukaryota) [Evidence ISS] [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0006614 - SRP-dependent cotranslational protein targeting to membrane [Evidence ISS] codon_start : 1 note : signal recognition particle 72 kDa product : signal recognition particle 72 protein_id : NP_079967.1

name	Arl9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46049039 CCDS:CCDS19368.1 GeneID:384185 MGI:1915496
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 product : ADP-ribosylation factor-like 9 protein_id : NP_996818.1

name	1700023E05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037271 CCDS:CCDS19369.1 GeneID:71868 MGI:1919118
definition	codon_start : 1 product : hypothetical protein LOC71868 protein_id : NP_082246.1

name	Hod (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28269685 GeneID:74318 MGI:1916782
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0007507 - heart development [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : odd homeobox 1; homeodomain only protein product : homeobox only domain protein_id : NP_783199.1

name	Spink2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34304087 GeneID:69982 MGI:1917232
definition	GO_function : GO:0004866 - endopeptidase inhibitor activity [Evidence IEA] codon_start : 1 note : acrosin-trypsin inhibitor product : serine protease inhibitor, Kazal type 2 protein_id : NP_899107.1

name	Rest (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859606 CCDS:CCDS19372.1 GeneID:19712 MGI:104897
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0017053 - transcriptional repressor complex [Evidence IC] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0016564 - transcriptional repressor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence IDA] codon_start : 1 exception : mismatches in translation product : RE1-silencing transcription factor protein_id : NP_035393.1

name	2610024G14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790049 CCDS:CCDS19373.1 GeneID:56412 MGI:1914306
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : hypothetical protein LOC56412 protein_id : NP_062810.1

name	Polr2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24418911 GeneID:231329 MGI:2388280
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed RNA polymerase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : polymerase (RNA) II (DNA directed) polypeptide B protein_id : NP_722493.1

name	Igfbp7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62990157 GeneID:29817 MGI:1352480
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0019838 - growth factor binding [Evidence IEA]; GO:0005520 - insulin-like growth factor binding [Evidence IEA] GO_process : GO:0001558 - regulation of cell growth [Evidence IEA] codon_start : 1 exception : mismatches in translation product : insulin-like growth factor binding protein 7 protein_id : NP_032074.2

name	EG384187 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51711148 GeneID:384187 MGI:3643571
definition	codon_start : 1 product : similar to Pdap1 protein protein_id : XP_357475.2

name	LOC665107 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665107
definition	number : 1 pseudo : _no_value

name	LOC669227 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669227
definition	number : 1 pseudo : _no_value

name	LOC669227 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669227
definition	number : 2 pseudo : _no_value

name	LOC669227 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669227
definition	number : 3 pseudo : _no_value

name	LOC100039398 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039398
definition	number : 3 pseudo : _no_value

name	LOC100039398 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039398
definition	number : 2 pseudo : _no_value

name	LOC100039398 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039398
definition	number : 1 pseudo : _no_value

name	A730089K16Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149253974 GeneID:320411 MGI:2443970
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs product : RIKEN cDNA A730089K16 gene transcript_id : XR_035181.1

name	Pea15b (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149253982 GeneID:231332 MGI:3525016
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 1 Protein product : phosphoprotein enriched in astrocytes 15B transcript_id : XR_035192.1

clone name	MSMg01-332I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313N19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-189K14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-299M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330G11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-501L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062B09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-076C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173D21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-496B05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-322N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369K12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-180I06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-168I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011D20
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-233K21.b	B6Ng01-233K21.g
ACC	GA045666	GA045667
length	1,101	1,169
definition	B6Ng01-233K21.b	B6Ng01-233K21.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(78,050,235 - 78,051,340)	(78,154,196 - 78,155,375)
sequence	gaattctttgcaagcagccactgtgttctgagccctcattttaacccctt tcaaagcaggtgaccaagacacgacattccagtctgctttacgaagtgaa gtttggcgtttaccacaagacatgcttgcttggttgctaatttttttaaa aaattgatttttgacatcatttcatgtggccagcacttggcagggggtag ccaatgggatttttgaagagcgtttgctcatagaaaattccagaaagcat gctctgtgccatgagtatttttccggggaaactggaaccatgtagggtac cactccccttgtcaattgtaattttctttcttacataattaattgtatct gaccatggtgaattccagacctgaaggaaaaaagtgaagatatcaaatta cttaccaacgggcaatgctaataaggtattttgaaaagtaagaattgagt ttgaattattttaaaagtcatttgaaagatgagttattcaaatgatcacc cttcctccctcctttggcttcttctttccttctttagactctctttaaag tgttctattttatttgatttggcgactgctaaatatcaaatccatcttcc tgggcttgacaaattggcagcctctcctggcagggctgatatgcagtggt tccttctgagccacttaacagatgactgccattctgagttatcagtctct accaatcatgagagatgttgcctatcacccacctcttgccatctgtgcct gggcaggccatggttggttctcttctgtctatggacttttgtagaaactg tctttgtcatgtattttgggctttcagagttggtgatgatcagctgtggt gggctattactatgttttgccttttcactgtcttttgagctgacctctgg ggtgggggcagccctatgttttgtttgagattgttcttatccatcttagc ccagggggttccagcagagctgactccatttctaacttgtgaatcagaca tgattcggcatcatgtgatctcataatctcgatatgctctgatgttttct gggtatcgtttctctggtcttgagatgtgaatgggtggagggtgaggggc t	gaattctttttaggggtcagaattcaaaggagaaaaacagttctgaataa acacaagcctttcccaccaggatttcttaacctagaaactagtgacagta agtcttcctcaaagttttgttgagagaatggaatgaggtagcttcagtac gcatacctggccaagaattgtcagtaggaggtgttttctttaatcctctc cctgccctgactaattcagtagatccatttgctatttgtagaacagtact ccactggcatttagcttttgtcatttgaagtacaatttagctaatgcaaa actccttcaaagtcacataacaaagccattaccactcattttgcatgatg cttataaaaaaaaacaaaaaacactctcattgttgacttaagactttgga ggactcaagatgtcaatagcctagtgagtcctgccctttctccaccagcc gccttttacaatagaatgcattctagttcatttcagaaaccactcagatg tctgactttcataaatttagttaacaggcttcatttataaattccaatag aatcatttcctttgaagtgtcacatatagaaatttctagaacaacagtaa taacaatataatcagcgtaacctactcagtaagacttggcttcagaccta actctttcgagttgttttgttgtttgttatttacttctattttctgtaca ttactaccaagaaccacaatgattgaaaatgagaataacatccacacctt gcaaatatggacaataacaaagaaaaactgataaagaagagaaagaagta atgttaacaccagcataaatcataaaaagtcaaagacagaaaattgaaac tctccttaaatccccctatagcctaaccttgtcctattaagaaaatgaga ttccagaggacataatttctccagctttattacacatagtcaatcaactg aaatgtatattatttgtagtatgcatgtgacacttcagtatatgtgccca tgcaaaatgttcaacagcaaataacatgacatcacctacattatgttctg tagtgagaatctaagatgctgcttcagcaattgtttaaaatacacactgc ctggtacttgcaactatgaacagcgtcgtgaatttgctgtcctaacaaat cttgggtaactttggccag
quality values	Open. Hide. 47 31 27 22 58 54 58 62 62 62 42 35 41 62 54 47 62 62 47 33 47 62 62 62 62 62 62 62 54 54 62 62 56 59 59 46 34 32 43 59 62 59 62 62 62 62 62 62 62 62 62 49 51 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 59 62 62 62 62 59 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 49 42 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 49 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 41 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 54 58 58 54 58 58 54 54 58 58 52 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 52 58 58 58 54 58 54 58 58 58 58 54 58 58 58 54 58 58 58 58 58 54 54 58 58 58 58 58 54 54 52 58 58 58 54 58 58 58 58 54 54 58 58 58 49 58 40 58 58 51 51 49 58 58 58 53 53 58 58 58 42 41 58 58 58 37 45 51 54 40 54 58 58 42 39 58 49 53 52 58 51 50 58 58 54 50 44 33 54 52 58 58 58 51 51 58 58 58 50 58 50 58 41 40 41 58 51 39 58 48 49 50 53 34 49 41 43 50 50 50 51 49 51 51 50 41 29 58 51 50 51 49 46 29 53 51 51 52 52 40 50 58 41 52 40 39 51 41 53 52 50 50 51 39 51 40 41 39 51 49 29 37 38 34 39 53 36 52 46 30 42 49 40 49 32 52 49 40 44 44 53 31 42 39 42 39 42 37 39 52 53 39 39 35 34 45 45 33 33 39 40 39 42 53 54 40 53 54 37 33 53 37 53 37 35 33 46 41 47 42 52 54 54 49 32 40 54 53 37 44 34 44 33 49 33 37 32 42 45 38 42 33 52 38 53 51 36 31 32 21 29 21 32 32 32 51 26 20 37 34 41 23 37 31 31 34 42 34 31 30 47 28 31 35 31 32 32 32 31 26 34 47 51 31 32 21 32 33 45 51 31 31 30 45 31 43 31 51 31 42 31 36 32 31 42 26 31 31 51 51 31 31 51 37 31 33 48 38 33 32 17 41 13 31 37 31 41 25 31 34 27 32 31 33 32 29 31 32 31 30 31 31 46 28 33 46 31 24 32 34 25 25 31 35 32 31 32 28 29 46 46 28 32 33 33 21 46 46 31 31 23 29 31 37 18 26 32 46 46 28 34 32 25 31 31 28 33 18 26 29 22 30 37 48 36 31 31 38 41 41 41 28 21 26 20 27 36 33 32 25 30 33 29 44 44 25 26 17 41 25 10 27 9 20 9 19 22 13 19 34 26 9 18 32 17 23 21 26 17 14 30 32 15 22 11 7 8 15 43 47 43 30 14 19 19 26 19 23 28 22 10 33 13 27 34 22 34 13 10 10 33 27 25 43 21 27 16 24 20 19 28 27 28 19 23 20 19 26 24 13 12 18 18 8 18 17 13 8 21 14 8 21 20 30 8 18 16 20 24 20 27 28 24 15 5 3 3 5 10 25 14 17 16 27 9 8 5 13 13 26 19 10 11 7 18 10 7 28 10 21 15 8 16 4 14 25 15 3 4 20 11 4 13 12 5 6 6 22 4 10 17 3 7 21 18 4 8 4 20 6 11 7 9 10 8 6 12 19 7 4 20 6 8 8 22 11 6 11 9 4 20 17 6 2 3	Open. Hide. 62 47 33 41 62 62 62 46 62 62 47 39 28 32 37 32 51 40 18 32 62 62 54 62 54 62 62 62 62 62 54 62 43 49 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 43 62 62 59 59 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 59 59 59 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 38 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 49 62 54 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 49 43 62 62 62 62 62 62 62 62 62 62 52 52 54 62 62 62 62 62 58 48 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 52 54 54 58 58 58 58 58 52 58 58 58 54 52 58 54 58 58 58 58 58 58 52 58 58 58 54 49 54 48 58 58 54 58 49 42 51 58 54 58 58 54 54 58 58 58 58 58 58 53 51 58 49 53 53 42 58 54 58 54 51 38 41 58 58 58 53 58 51 38 58 49 46 58 54 54 58 58 58 54 58 58 54 48 49 58 50 54 50 51 51 54 58 51 58 51 58 58 40 37 58 58 54 48 50 50 58 54 50 49 51 58 53 54 53 46 48 42 51 58 50 53 58 58 53 53 51 49 51 58 52 53 53 58 39 51 39 46 58 47 51 49 53 53 38 53 41 49 42 50 53 32 49 50 58 47 50 50 50 46 30 49 47 30 50 38 35 52 45 54 54 40 54 53 53 31 52 38 51 37 54 37 54 54 42 54 39 53 54 42 54 42 54 28 39 45 39 36 32 42 52 44 52 54 37 51 31 36 54 37 54 45 54 39 31 41 29 54 52 38 52 45 40 54 45 38 41 52 54 37 37 33 20 22 15 33 32 53 40 31 46 53 40 53 51 45 32 52 53 32 46 45 37 31 53 52 31 40 31 41 36 45 32 45 39 42 32 42 53 36 52 32 31 31 31 34 51 34 33 31 33 40 31 30 51 26 51 45 42 46 51 51 46 31 26 23 42 37 31 33 51 35 30 40 33 24 46 24 46 51 33 27 42 32 29 35 31 31 33 46 22 18 18 27 35 31 46 42 26 31 31 21 31 37 46 33 31 31 31 43 38 46 48 46 33 31 32 31 29 46 33 36 25 27 30 36 42 48 46 31 28 36 21 23 48 25 31 38 34 31 22 22 12 16 31 46 30 31 36 48 48 48 41 26 29 27 31 30 23 31 26 27 28 8 21 21 22 38 27 26 24 32 38 22 32 25 30 25 36 48 44 31 26 31 31 18 31 18 25 18 37 27 27 36 21 26 32 18 16 21 26 9 9 32 21 29 15 20 34 28 32 33 33 48 31 23 16 17 13 4 18 22 10 21 27 20 23 34 17 20 27 34 16 20 20 24 23 23 47 31 12 9 8 17 14 9 9 8 12 26 47 14 32 11 21 15 27 13 16 28 24 11 28 8 8 18 19 21 8 28 13 15 13 18 16 27 16 16 24 16 16 15 25 11 40 15 9 20 7 9 9 34 38 15 7 28 13 27 13 14 11 5 3 5 14 11 29 13 6 3 4 10 15 24 16 16 20 7 21 16 9 4 14 15 5 6 4 17 9 12 6 16 6 4 6 4 12 7 21 20 5 17 13 5 6 14 13 13 6 10 11 9 18 10 3 3 3 15 15 4 7 6 12 10 12 8 15 8 5 11 5 25 17 5 29 17 7 18 9 15 8 8 9 7 4 6 5 5 7 8 6 10 3 5 6 7 2 2 2 6 6 3 5 6 6 6 4 4 7 3 5 3 3 2 1 3 2 3 3 3 3 5 6 4 4 6 5 8 14 7 17 7 5 19 30 17 4 11 4 2 3 7 7 5 6 10 6 7 25 11 6 7 2 2 4 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_78050235_78051340
seq2: B6Ng01-233K21.b_47_1147

seq1  GAATTCTTTGCAAGCAGCCACTGTGTTCTGAGCCCTCATTTTAACCCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCAAGCAGCCACTGTGTTCTGAGCCCTCATTTTAACCCCTT  50

seq1  TCAAAGCAGGTGACCAAGACACGACATTCCAGTCTGCTTTACGAAGTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGCAGGTGACCAAGACACGACATTCCAGTCTGCTTTACGAAGTGAA  100

seq1  GTTTGGCGTTTACCACAAGACATGCTTGCTTGGTTGCTAATTTTTTTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGCGTTTACCACAAGACATGCTTGCTTGGTTGCTAATTTTTTTAAA  150

seq1  AAATTGATTTTTGACATCATTTCATGTGGCCAGCACTTGGCAGGGGGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGATTTTTGACATCATTTCATGTGGCCAGCACTTGGCAGGGGGTAG  200

seq1  CCAATGGGATTTTTGAAGAGCGTTTGCTCATAGAAAATTCCAGAAAGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGGGATTTTTGAAGAGCGTTTGCTCATAGAAAATTCCAGAAAGCAT  250

seq1  GCTCTGTGCCATGAGTATTTTTCCGGGGAAACTGGAACCATGTAGGGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGTGCCATGAGTATTTTTCCGGGGAAACTGGAACCATGTAGGGTAC  300

seq1  CACTCCCCTTGTCAATTGTAATTTTCTTTCTTACATAATTAATTGTATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCCTTGTCAATTGTAATTTTCTTTCTTACATAATTAATTGTATCT  350

seq1  GACCATGGTGAATTCCAGACCTGAAGGAAAAAAGTGAAGATATCAAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATGGTGAATTCCAGACCTGAAGGAAAAAAGTGAAGATATCAAATTA  400

seq1  CTTACCAACGGGCAATGCTAATAAGGTATTTTGAAAAGTAAGAATTGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCAACGGGCAATGCTAATAAGGTATTTTGAAAAGTAAGAATTGAGT  450

seq1  TTGAATTATTTTAAAAGTCATTTGAAAGATGAGTTATTCAAATGATCACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTATTTTAAAAGTCATTTGAAAGATGAGTTATTCAAATGATCACC  500

seq1  CTTCCTCCCTCCTTTGGCTTCTTCTTTCCTTCTTTAGACTCTCTTTAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCCCTCCTTTGGCTTCTTCTTTCCTTCTTTAGACTCTCTTTAAAG  550

seq1  TGTTCTATTTTATTTGATTTGGCGACTGCTAAATATCAAATCCATCTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTATTTTATTTGATTTGGCGACTGCTAAATATCAAATCCATCTTCC  600

seq1  TGGGCTTGACAAATTGGCAGCCTCTCCTGGCAGGGCTGATATGCAGTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTTGACAAATTGGCAGCCTCTCCTGGCAGGGCTGATATGCAGTGGT  650

seq1  TCCTTCTGAGCCACTTAACAGATGACTGCCATTCTGAGTTATCAGTCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTGAGCCACTTAACAGATGACTGCCATTCTGAGTTATCAGTCTCT  700

seq1  ACCAATCATGAGAGATGTTGCCTATCACCCACCTCTTGCCATCTGTGCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATCATGAGAGATGTTGCCTATCACCCACCTCTTGCCATCTGTGCCT  750

seq1  GGGCAGGCCATGGTTGGTTCTCTTCTGTCTATGGACTTTTGTAGAAACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGGCCATGGTTGGTTCTCTTCTGTCTATGGACTTTTGTAGAAACTG  800

seq1  TCTTTGTCATGTATTTTGGGCTTTCAGAGTTGGTGATGATCAGCTGTGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTCATGTATTTTGGGCTTTCAGAGTTGGTGATGATCAGCTGTGGT  850

seq1  GGGCTATTACTATGTTTTGCCTTTTCACTGTCTTTTGAGCTGACCTCTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTATTACTATGTTTTGCCTTTTCACTGTCTTTTGAGCTGACCTCTGG  900

seq1  GGTGGGGGCAGCCCTATGTTTTGTTTGAGAATTGTTCTTATCCATCTTAG  950
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGTGGGGGCAGCCCTATGTTTTGTTTGAG-ATTGTTCTTATCCATCTTAG  949

seq1  CCCAGGGGGTTCCAGCAGAGCTGACTCCATTTCTAACTTGTGAATCAGAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCCAGGGGGTTCCAGCAGAGCTGACTCCATTTCTAACTTGTGAATCAGA-  998

seq1  CATGATTCGGCAATCATGTGATCTCATAATCTCGATATGCTCTGATGTTT  1050
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CATGATTCGGC-ATCATGTGATCTCATAATCTCGATATGCTCTGATGTTT  1047

seq1  TCTGGGGTATTCGTTTCTCCTGGTCTTTGAGATGTGA--TGGTGGAGGGT  1098
      ||| ||||| |||||||| |||||| |||||||||||   ||||||||||
seq2  TCT-GGGTA-TCGTTTCT-CTGGTC-TTGAGATGTGAATGGGTGGAGGGT  1093

seq1  GAGGGGCT  1106
      ||||||||
seq2  GAGGGGCT  1101

seq1: chr5_78154196_78155375
seq2: B6Ng01-233K21.g_69_1237 (reverse)

seq1  CTGGCCAAAGTTA-CAAAGATTTTGTTAGGACAGACAAATTCTAGAGAAC  49
      ||||||||||||| | |||| ||||||||||||| |||||||   |  ||
seq2  CTGGCCAAAGTTACCCAAGA-TTTGTTAGGACAG-CAAATTC---ACGAC  45

seq1  GCTTGTCATAGTGGCCAAGTTAACA-GCAGTGTGTA-TTTAAAC-ATTGC  96
      |||  ||||||| | |||| || || |||||||||| ||||||| |||||
seq2  GCTGTTCATAGTTG-CAAG-TACCAGGCAGTGTGTATTTTAAACAATTGC  93

seq1  TGAGGCAACCAATCTTAGA-TCTCACTACAG-ACATAATGTAAGGTGATG  144
      ||| ||| |  |||||||| ||||||||||| ||||||||| ||||||| 
seq2  TGAAGCAGC--ATCTTAGATTCTCACTACAGAACATAATGT-AGGTGAT-  139

seq1  GTCATGTTAATTTGCTTGGTTGAACATTTTGCAATGGGCACATATACTGA  194
      |||||||| |||||||  |||||||||||||| |||||||||||||||||
seq2  GTCATGTT-ATTTGCT--GTTGAACATTTTGC-ATGGGCACATATACTGA  185

seq1  AGTGTCACAATGCATACTACAAAT-ATATACATTTCAGTTGATTGACTAT  243
      |||||||| ||||||||||||||| |||||||||||||||||||||||||
seq2  AGTGTCAC-ATGCATACTACAAATAATATACATTTCAGTTGATTGACTAT  234

seq1  GTGTTAATAAAGCTGGAGAAATTTATGTCCTCTGGAATCTCATTTTCTTA  293
      ||| ||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GTG-TAATAAAGCTGGAGAAA-TTATGTCCTCTGGAATCTCATTTTCTTA  282

seq1  ATAGGACAAGGTTAGGCTATAGGGGGATTTAAGGAGAGTTTCAATTTTCT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGACAAGGTTAGGCTATAGGGGGATTTAAGGAGAGTTTCAATTTTCT  332

seq1  GTCTTTGACTTTTTATGATTTATGCTGGTGTTAACATTACTTCTTTCTCT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTGACTTTTTATGATTTATGCTGGTGTTAACATTACTTCTTTCTCT  382

seq1  TCTTTATCAGTTTTTCTTTGTTATTGTCCATATTTGCAAGGTGTGGATGT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATCAGTTTTTCTTTGTTATTGTCCATATTTGCAAGGTGTGGATGT  432

seq1  TATTCTCATTTTCAATCATTGTGGTTCTTGGTAGTAATGTACAGAAAATA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCATTTTCAATCATTGTGGTTCTTGGTAGTAATGTACAGAAAATA  482

seq1  GAAGTAAATAACAAACAACAAAACAACTCGAAAGAGTTAGGTCTGAAGCC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAAATAACAAACAACAAAACAACTCGAAAGAGTTAGGTCTGAAGCC  532

seq1  AAGTCTTACTGAGTAGGTTACGCTGATTATATTGTTATTACTGTTGTTCT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTTACTGAGTAGGTTACGCTGATTATATTGTTATTACTGTTGTTCT  582

seq1  AGAAATTTCTATATGTGACACTTCAAAGGAAATGATTCTATTGGAATTTA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTCTATATGTGACACTTCAAAGGAAATGATTCTATTGGAATTTA  632

seq1  TAAATGAAGCCTGTTAACTAAATTTATGAAAGTCAGACATCTGAGTGGTT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAAGCCTGTTAACTAAATTTATGAAAGTCAGACATCTGAGTGGTT  682

seq1  TCTGAAATGAACTAGAATGCATTCTATTGTAAAAGGCGGCTGGTGGAGAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAATGAACTAGAATGCATTCTATTGTAAAAGGCGGCTGGTGGAGAA  732

seq1  AGGGCAGGACTCACTAGGCTATTGACATCTTGAGTCCTCCAAAGTCTTAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAGGACTCACTAGGCTATTGACATCTTGAGTCCTCCAAAGTCTTAA  782

seq1  GTCAACAATGAGAGTGTTTTTTGTTTTTTTTTATAAGCATCATGCAAAAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACAATGAGAGTGTTTTTTGTTTTTTTTTATAAGCATCATGCAAAAT  832

seq1  GAGTGGTAATGGCTTTGTTATGTGACTTTGAAGGAGTTTTGCATTAGCTA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGTAATGGCTTTGTTATGTGACTTTGAAGGAGTTTTGCATTAGCTA  882

seq1  AATTGTACTTCAAATGACAAAAGCTAAATGCCAGTGGAGTACTGTTCTAC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTACTTCAAATGACAAAAGCTAAATGCCAGTGGAGTACTGTTCTAC  932

seq1  AAATAGCAAATGGATCTACTGAATTAGTCAGGGCAGGGAGAGGATTAAAG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCAAATGGATCTACTGAATTAGTCAGGGCAGGGAGAGGATTAAAG  982

seq1  AAAACACCTCCTACTGACAATTCTTGGCCAGGTATGCGTACTGAAGCTAC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACCTCCTACTGACAATTCTTGGCCAGGTATGCGTACTGAAGCTAC  1032

seq1  CTCATTCCATTCTCTCAACAAAACTTTGAGGAAGACTTACTGTCACTAGT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTCCATTCTCTCAACAAAACTTTGAGGAAGACTTACTGTCACTAGT  1082

seq1  TTCTAGGTTAAGAAATCCTGGTGGGAAAGGCTTGTGTTTATTCAGAACTG  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGGTTAAGAAATCCTGGTGGGAAAGGCTTGTGTTTATTCAGAACTG  1132

seq1  TTTTTCTCCTTTGAATTCTGACCCCTAAAAAGAATTC  1180
      |||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTCCTTTGAATTCTGACCCCTAAAAAGAATTC  1169

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information