BAC Information

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BAC

Clone NameB6Ng01-235B13
Chromosome5 (Build37)
Map Location 61,023,226 - 61,024,367
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546866, Cbfa2t2-ps1
Downstream geneLOC100041498, LOC666597, EG666610
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-235B13.bB6Ng01-235B13.g
ACCGA046666GA046667
length1,1341,168
definitionB6Ng01-235B13.b B6Ng01-235B13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacctgcctgaaaatagatcacagtatattaaattaaccttgcta
ttttatttctacttgctctaggaaataaatattaaagctgaagtaaattt
atctacttcccttgctttctttcatgactccaagtcaaggcttctcgtca
tactgctctgtttgagcaaattttgtacattatcatttaatttaacattt
atgatttatattacatatataattttttgtatattgtatatgtcaatttc
tcttaaattacatatactttataaaacattatgaaatgagttataagtac
catgggaaattagtagatttgtttgcccttcacatttcaaatatatgtaa
tcaacataagacttgatatatactaggcacttattactgaatgcaatctt
tagagatgtatcgatacaagtacacctcttaatttaattacaatgcttta
tgaaatatttttgttcttaaaatattttactaacaggataaatggagaat
tataactggtatgtgtgagaaaataaagaaaagtgaaatactacatctaa
tgacagtttgatcgtaagtgaagttcttatcattacagaatttcaaaaca
aaacagaccttataaggtgaaatgagactataaaaagctgtaatgattta
caagtttgtcccttacctgctcagataacaaattttttattaatgtcaat
ttctgtagctattatgtcccctctcatcatgatgtatatctttctgctat
cactcatctcttaggctgttggaatctttaataatttagtactagagaga
atgtaccttttattatggagttttcagtatggtgaggaagactaacaaag
ttagtgaactaattgcaaatcacaaagctgtgaaccatggagcatacaga
gcctatccttcagtctactgcattatctgaacacttccattttccacgtg
ctatgacataataataaacctgtgttaattctgtacttcaaaattctgac
tcatcttaattatccttttcttctctagaatcatttcactgaagcagtgt
ttgttcactcagattgctgacttggggaaaaactggtgacattctattac
atacaactggatccaactgtatatctgaatgtaa

gaattcagaacttttcagctggggaacgagagtaccagtgagtacagctt
tacgaggtaagcctggccttgaactttctaacgaaattcaagacagtcta
tcagaagtaaagtggaatatgtttggccttgaattttttctggtgttagg
agcccttttgttccttttcacatgttatcaagtgattaagatagggctga
aaattctagaggaaattcaggacaagctatcagaagtaaagcggggggag
agagagtaggaacaaagagaaaatatggtacacaaaataagtatacaggc
ctttccaagggtcttgaacccgaggaaaagtttaggtcaggtaagaatac
ctggagagagattagaagaaaaagaggaaaaagggaaaagaagaaagatc
aattagcggaggtctctaggaaaaggagcctgtgctcatcgctggatggg
ctcggggagccagctcttagtagctctgaagcaggtgaagaattctcctc
tgaggaaacagactgggaggaagaagcagcccattaccagccagctaatt
ggtcaagaaaaaagccaaaagcggctggcgaaggccagtttgctaattgg
cctcagggcaatcggctaccaggtgcactcccgccctatgcggagtcccc
gccctgcgtagtgcgtcagcccgtagtgcgtcagcaatgcgcagagaggc
agtgcgcagagaggcagtgcgcagactcattcattccccgagaggaacaa
aggaaaatacaacaggcatttccagtctttgaaggagccgagggtgggcg
tgtccacgctccggtagaatacttacaaattaaagaaattgctgagtcgg
tccgtaaatacggaaccaatgctaattttaccttggtgcagttagacagg
ctcgctggcatggcactaactcctgctgactggcaaatgattgcaaaagc
cgctctccctaatatgggcaaatattttggaaatggagatctctgtggcg
agagctgcacaggcgcagaccgagcaaacgctgctgcttactcagagcaa
gaagattgacttttgacttgttacggtcagaagagctaatctgctaagct
gatagaggtatcataatgtctacccacagatgtccattagttcttaacat
gtttgcccaagcctttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_61023226_61024367
seq2: B6Ng01-235B13.b_46_1179

seq1  GAATTCACCTGCCTGAAAATAGATCACAGTATATTAAATTAACCTTGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTGCCTGAAAATAGATCACAGTATATTAAATTAACCTTGCTA  50

seq1  TTTTATTTCTACTTGCTCTAGGAAATAAATATTAAAGCTGAAGTAAATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTCTACTTGCTCTAGGAAATAAATATTAAAGCTGAAGTAAATTT  100

seq1  ATCTACTTCCCTTGCTTTCTTTCATGACTCCAAGTCAAGGCTTCTCGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTTCCCTTGCTTTCTTTCATGACTCCAAGTCAAGGCTTCTCGTCA  150

seq1  TACTGCTCTGTTTGAGCAAATTTTGTACATTATCATTTAATTTAACATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTCTGTTTGAGCAAATTTTGTACATTATCATTTAATTTAACATTT  200

seq1  ATGATTTATATTACATATATAATTTTTTGTATATTGTATATGTCAATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTATATTACATATATAATTTTTTGTATATTGTATATGTCAATTTC  250

seq1  TCTTAAATTACATATACTTTATAAAACATTATGAAATGAGTTATAAGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAATTACATATACTTTATAAAACATTATGAAATGAGTTATAAGTAC  300

seq1  CATGGGAAATTAGTAGATTTGTTTGCCCTTCACATTTCAAATATATGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGAAATTAGTAGATTTGTTTGCCCTTCACATTTCAAATATATGTAA  350

seq1  TCAACATAAGACTTGATATATACTAGGCACTTATTACTGAATGCAATCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATAAGACTTGATATATACTAGGCACTTATTACTGAATGCAATCTT  400

seq1  TAGAGATGTATCGATACAAGTACACCTCTTAATTTAATTACAATGCTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATGTATCGATACAAGTACACCTCTTAATTTAATTACAATGCTTTA  450

seq1  TGAAATATTTTTGTTCTTAAAATATTTTACTAACAGGATAAATGGAGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATATTTTTGTTCTTAAAATATTTTACTAACAGGATAAATGGAGAAT  500

seq1  TATAACTGGTATGTGTGAGAAAATAAAGAAAAGTGAAATACTACATCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTGGTATGTGTGAGAAAATAAAGAAAAGTGAAATACTACATCTAA  550

seq1  TGACAGTTTGATCGTAAGTGAAGTTCTTATCATTACAGAATTTCAAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGTTTGATCGTAAGTGAAGTTCTTATCATTACAGAATTTCAAAACA  600

seq1  AAACAGACCTTATAAGGTGAAATGAGACTATAAAAAGCTGTAATGATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGACCTTATAAGGTGAAATGAGACTATAAAAAGCTGTAATGATTTA  650

seq1  CAAGTTTGTCCCTTACCTGCTCAGATAACAAATTTTTTATTAATGTCAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTGTCCCTTACCTGCTCAGATAACAAATTTTTTATTAATGTCAAT  700

seq1  TTCTGTAGCTATTATGTCCCCTCTCATCATGATGTATATCTTTCTGCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTAGCTATTATGTCCCCTCTCATCATGATGTATATCTTTCTGCTAT  750

seq1  CACTCATCTCTTAGGCTGTTGGAATCTTTAATAATTTAGTACTAGAGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCATCTCTTAGGCTGTTGGAATCTTTAATAATTTAGTACTAGAGAGA  800

seq1  ATGTACCTTTTATTATGGAGTTTTCAGTATGGTGAGGAAGACTAACAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACCTTTTATTATGGAGTTTTCAGTATGGTGAGGAAGACTAACAAAG  850

seq1  TTAGTGAACTAATTGCAAATCACAAAGCTGTGAACCATGGAGCATACAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGAACTAATTGCAAATCACAAAGCTGTGAACCATGGAGCATACAGA  900

seq1  GCCTATCCTTCAGTCTACTGCATTATCTGAACACTTCCATTTTCCACGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATCCTTCAGTCTACTGCATTATCTGAACACTTCCATTTTCCACGTG  950

seq1  CTATGACAATAATAATAAA-CTGTGTTAATTCTGTACTTCAAAATTCTGA  999
      ||||||| ||||||||||| ||||||||||||||||||||||||||||||
seq2  CTATGAC-ATAATAATAAACCTGTGTTAATTCTGTACTTCAAAATTCTGA  999

seq1  CTCATCTTAATTATCCTTTTCTTCTCTAGAATCATTTTCACTGAAGCAGG  1049
      |||||||||||||||||||||||||||||||||| ||||||||||||| |
seq2  CTCATCTTAATTATCCTTTTCTTCTCTAGAATCA-TTTCACTGAAGCA-G  1047

seq1  TGTTTGTTCAACTCAAGAATTGCTGACTTGGGGAAAAACTGGTGACATTC  1099
      ||||||||| |||||   ||||||||||||||||||||||||||||||||
seq2  TGTTTGTTC-ACTCA--GATTGCTGACTTGGGGAAAAACTGGTGACATTC  1094

seq1  TATTACCAATACAAACTGATCAAACTGTATATCCAGGATGTAA  1142
      ||||||  ||||||   |||| |||||||||| | | ||||||
seq2  TATTAC--ATACAACTGGATCCAACTGTATAT-CTGAATGTAA  1134


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