BAC Information

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BAC

Clone NameB6Ng01-236K06
Chromosome5 (Build37)
Map Location 11,014,050 - 11,014,470
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC625446, LOC435832, LOC100041395, LOC381612, EG625586, LOC242809, LOC623849, LOC100041408, LOC667880, EG667888
Downstream geneEG667901, EG667907, LOC667916, LOC100041472, EG545728, LOC100042819, LOC667942, LOC667948, EG667949, Speer1-ps1, EG667956, LOC667961, EG667967, LOC100042858, LOC667974, EG667986, EG623898, EG668001, LOC668008, EG668011, LOC668017, EG668021, LOC623998, EG668043, LOC545732, LOC384144
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-236K06.bB6Ng01-236K06.g
ACCGA047810GA047811
length415806
definitionB6Ng01-236K06.b B6Ng01-236K06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
agcttattttctaatgatattttaaattaagatacatatttcaaaaatca
aattgctaatggctggttaaatgaatatatattctgcattttcttttcct
taatcttactgtctttatgtttaattccaataaaattaaatgaatattga
ttttgctactgtataattgtaacattatataattatataaaaagtttcta
accagtaccgtcagagttccttggaactataccaccaatcaaagaaaaca
catggtggatcttgtggctctagctatattcatagcagaggatggcctag
tcagtcatcaatggaaggagaagcccttggtcctgtgaaggctctatgcc
ccaggataggggaatgccagggccaggaatgggagtggtgggttggggag
cagggggaaagggga
gaattccacatccttaagacccttaacccataaaaactcctagcctcgtg
gccatcatccattatctcctgtgtgggatgcatgtcagcccggagctcca
taattaaatgacctcatgtaattacatcaagatggtccttcacgattttt
tgggtgcacgccgaaaaggtattgagttggggtttccccactaggttcta
tcactagcaactaaccattgagagtagttccaccaagaagggacatggca
tgaagaacacccttattttctatgctcagattaggcttgctgtgttttca
acaagtcttgtgcaagtagcaacacatgagctcctctcagttcatgagtg
taatagttatgtcatcctcaggagacagaatttcctagcactcttcttca
cccttaagacctcccattctttctacttcctcttcaacagggtttccaca
gctttgggccaagcttggagggggcacaagtgttaacttctatgctccat
tcaggcctgagtcctcagtctgtgattctctgcactttgaccagaagcat
ctcatctttcattattacttcacatggaaagaaaagttgatctgacaaag
ttaagaaccgtctgtttctatgagtttattagaaggaattttttggggga
agggtttcaagacaggtttcctttggaaccctggggtgctctaaaatccc
ctgtaaacggcccaaactaaaaatttctcgcctcgtgccctcaatgtggg
ataaagagtgttgctcacacgcccctctctaaaagggattttttctcagg
aggcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_11014050_11014470
seq2: B6Ng01-236K06.b_41_461

seq1  GAATTCAGCTTATTTTCTAATGATATTTTAAATTAAGATACATATTTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTTATTTTCTAATGATATTTTAAATTAAGATACATATTTCAA  50

seq1  AAATCAAATTGCTAATGGCTGGTTAAATGAATATATATTCTGCATTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAAATTGCTAATGGCTGGTTAAATGAATATATATTCTGCATTTTCT  100

seq1  TTTCCTTAATCTTACTGTCTTTATGTTTAATTCCAATAAAATTAAATGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTAATCTTACTGTCTTTATGTTTAATTCCAATAAAATTAAATGAA  150

seq1  TATTGATTTTGCTACTGTATAATTGTAACATTATATAATTATATAAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATTTTGCTACTGTATAATTGTAACATTATATAATTATATAAAAAG  200

seq1  TTTCTAACCAGTACCGTCAGAGTTCCTTGGAACTATACCACCAATCAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAACCAGTACCGTCAGAGTTCCTTGGAACTATACCACCAATCAAAG  250

seq1  AAAACACATGGTGGATCTTGTGGCTCTAGCTATATTCATAGCAGAGGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACATGGTGGATCTTGTGGCTCTAGCTATATTCATAGCAGAGGATG  300

seq1  GCCTAGTCAGTCATCAATGGAAGGAGAAGCCCTTGGTCCTGTGAAGGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGTCAGTCATCAATGGAAGGAGAAGCCCTTGGTCCTGTGAAGGCTC  350

seq1  TATGCCCCAGGATAGGGGAATGCCAGGGCCAGGAATGGGAGTGGTGGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCCCAGGATAGGGGAATGCCAGGGCCAGGAATGGGAGTGGTGGGTT  400

seq1  GGGGAGCAGGGGGAAAGGGGA  421
      |||||||||||||||||||||
seq2  GGGGAGCAGGGGGAAAGGGGA  421