MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-237A06
Chromosome	5 (Build37)
Map Location	86,338,474 - 86,503,175
singlet/doublet	doublet
Overlap gene	Cenpc1, LOC100039521, AI586015
Upstream gene	none
Downstream gene	Ube1l2, Gnrhr, Tmprss11c, Tmprss11d, Tmprss11a, 9930032O22Rik, Tmprss11f, Tmprss11b, Tmprss11e, A730098D12Rik, LOC622056, Ugt2b34, Ugt2b1, LOC665424, LOC545767, Ugt2b35, Ugt2b36
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cenpc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12617 MGI:99700
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039521 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039521
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs pseudo : _no_value

name	AI586015 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56792 MGI:1926193
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ube1l2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231380 MGI:1913894
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gnrhr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14715 MGI:95790
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmprss11c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435845 MGI:3521861
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmprss11d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231382 MGI:2385221
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmprss11a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:194597 MGI:2684853
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9930032O22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320454 MGI:2444058
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmprss11f (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243083 MGI:2442348
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmprss11b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319875 MGI:2442893
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmprss11e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243084 MGI:3513175
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A730098D12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231386 MGI:2443713
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC622056 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622056
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ugt2b34 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100727 MGI:2140962
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ugt2b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71773 MGI:1919023
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665424 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665424
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	LOC545767 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545767
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 112 ESTs, 32 Proteins pseudo : _no_value

name	Ugt2b35 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243085 MGI:3576100
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ugt2b36 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231396 MGI:3576103
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cenpc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802028 GeneID:12617 MGI:99700
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centromere protein C1 transcript_id : NM_007683.2

name	AI586015 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385057 GeneID:56792 MGI:1926193
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI586015 transcript_id : NM_019992.3

name	Ube1l2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254245 GeneID:231380 MGI:1913894
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin-activating enzyme E1-like 2 transcript_id : NM_172712.2

name	Gnrhr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754031 GeneID:14715 MGI:95790
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gonadotropin releasing hormone receptor transcript_id : NM_010323.1

name	Tmprss11c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:100815530 GeneID:435845 MGI:3521861
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protease, serine 11c transcript_id : NM_001030297.2

name	Tmprss11d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130165 GeneID:231382 MGI:2385221
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protease, serine 11d transcript_id : NM_145561.2

name	Tmprss11a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366997 GeneID:194597 MGI:2684853
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protease, serine 11a transcript_id : NM_001033233.2

name	9930032O22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803131 GeneID:320454 MGI:2444058
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9930032O22 gene transcript_id : NM_177162.3

name	Tmprss11f (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134053910 GeneID:243083 MGI:2442348
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protease, serine 11f transcript_id : NM_178730.3

name	Tmprss11b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803132 GeneID:319875 MGI:2442893
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protease, serine 11b transcript_id : NM_177024.3

name	Tmprss11e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802965 GeneID:243084 MGI:3513175
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protease, serine 11e transcript_id : NM_172880.2

name	A730098D12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124430548 GeneID:231386 MGI:2443713
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A730098D12 gene transcript_id : NM_177680.3

name	Ugt2b34 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130096 GeneID:100727 MGI:2140962
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP glucuronosyltransferase 2 family, polypeptide B34 transcript_id : NM_153598.2

name	Ugt2b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22779900 GeneID:71773 MGI:1919023
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP glucuronosyltransferase 2 family, polypeptide B1 transcript_id : NM_152811.1

name	Ugt2b35 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347504 GeneID:243085 MGI:3576100
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP glucuronosyltransferase 2 family, polypeptide B35 transcript_id : NM_172881.2

name	Ugt2b36 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71274183 GeneID:231396 MGI:3576103
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP glucuronosyltransferase 2 family, polypeptide B36 transcript_id : NM_001029867.1

name	Cenpc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671740 GeneID:12617 MGI:99700
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0000775 - chromosome, pericentric region [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] codon_start : 1 exception : mismatches in translation function : centromeric protein product : centromere autoantigen C1 protein_id : NP_031709.1

name	AI586015 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910568 CCDS:CCDS19377.1 GeneID:56792 MGI:1926193
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0005070 - SH3/SH2 adaptor activity [Evidence IDA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0030099 - myeloid cell differentiation [Evidence TAS]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IDA] codon_start : 1 note : stem cell adaptor protein STAP-1 product : BCR downstream signaling 1 protein_id : NP_064376.1

name	Ube1l2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370032 CCDS:CCDS19378.1 GeneID:231380 MGI:1913894
definition	codon_start : 1 product : ubiquitin-activating enzyme E1-like 2 protein_id : NP_766300.1

name	Gnrhr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754032 CCDS:CCDS19379.1 GeneID:14715 MGI:95790
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : gonadotropin releasing hormone receptor protein_id : NP_034453.1

name	Tmprss11c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71892422 CCDS:CCDS19380.1 GeneID:435845 MGI:3521861
definition	GO_function : GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : neurobin product : transmembrane protease, serine 11c protein_id : NP_001025468.1

name	Tmprss11d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704106 GeneID:231382 MGI:2385221
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : airway spesific trypsin-like protease; airway trypsin-like protease product : transmembrane protease, serine 11d precursor protein_id : NP_663536.1

name	Tmprss11a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84794609 GeneID:194597 MGI:2684853
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : airway trypsin-like protease 1 product : transmembrane protease, serine 11a protein_id : NP_001028405.1

name	9930032O22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893147 GeneID:320454 MGI:2444058
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : serine protease Desc4 protein_id : NP_796136.1

name	Tmprss11f (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32189423 GeneID:243083 MGI:2442348
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : transmembrane protease, serine 11f protein_id : NP_848845.1

name	Tmprss11b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28892897 GeneID:319875 MGI:2442893
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : transmembrane protease, serine 11b protein_id : NP_795998.1

name	Tmprss11e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370340 GeneID:243084 MGI:3513175
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]; GO:0008236 - serine-type peptidase activity [Evidence IDA] GO_process : GO:0006508 - proteolysis [Evidence IEA] [Evidence IDA] codon_start : 1 product : type II transmembrane serine protease protein_id : NP_766468.1

name	A730098D12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124430549 GeneID:231386 MGI:2443713
definition	codon_start : 1 product : hypothetical protein LOC231386 protein_id : NP_808348.2

name	Ugt2b34 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956406 CCDS:CCDS19381.1 GeneID:100727 MGI:2140962
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] codon_start : 1 product : UDP glucuronosyltransferase 2 family, polypeptide B34 protein_id : NP_705826.1

name	Ugt2b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22779901 CCDS:CCDS19382.1 GeneID:71773 MGI:1919023
definition	codon_start : 1 product : UDP glucuronosyltransferase 2 family, polypeptide B1 protein_id : NP_690024.1

name	Ugt2b35 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370342 GeneID:243085 MGI:3576100
definition	GO_function : GO:0015020 - glucuronosyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]; GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : UDP glucuronosyltransferase 2 family, polypeptide B35 protein_id : NP_766469.1

name	Ugt2b36 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71274184 CCDS:CCDS19384.1 GeneID:231396 MGI:3576103
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]; GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : UDP glucuronosyltransferase 2 family, polypeptide B36 protein_id : NP_001025038.1

name	LOC622056 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622056
definition	number : 3 pseudo : _no_value

name	LOC622056 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622056
definition	number : 2 pseudo : _no_value

name	LOC622056 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622056
definition	number : 1 pseudo : _no_value

name	LOC665424 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665424
definition	number : 1 pseudo : _no_value

name	LOC665424 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665424
definition	number : 2 pseudo : _no_value

name	LOC665424 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665424
definition	number : 3 pseudo : _no_value

name	LOC665424 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665424
definition	number : 4 pseudo : _no_value

name	LOC665424 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665424
definition	number : 5 pseudo : _no_value

name	LOC665424 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665424
definition	number : 6 pseudo : _no_value

name	LOC665424 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665424
definition	number : 7 pseudo : _no_value

name	LOC100039521 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253987 GeneID:100039521
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : similar to RNA polymerase I associated factor (Paf53) pseudo : _no_value transcript_id : XR_031063.1

name	LOC545767 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253988 GeneID:545767
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 112 ESTs, 32 Proteins product : similar to elongation factor 1 alpha pseudo : _no_value transcript_id : XR_031253.1

clone name	MSMg01-491L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484O04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-189M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386J07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-330N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473J11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-304D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068N18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-454J02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-068E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186D02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-411B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092C12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-399B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524G09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-425O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273G09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-274I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405H08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-071B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386O14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-146N13
singlet/doublet	doublet
plural/unique	plural

clone name	B6Ng01-108O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165N20
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-237A06.b	B6Ng01-237A06.g
ACC	GA048087	GA048088
length	775	1,077
definition	B6Ng01-237A06.b	B6Ng01-237A06.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(86,338,474 - 86,339,248)	(86,502,100 - 86,503,175)
sequence	gaattcttcctgatgctctgtggaattgctgaagctgagtaaacaatgta tgttcttcctcttcagggagaacaatattgtactgatttagatggatgcc caaccaactcaattaatacctgggggcaagaatatgatttgtttccaaat tgcgcccatcctaaatcgaggaggtgaacatggaaatgacatatttattt taggactggttctcatctttacacacacacacacacacagcaccctttat ctcagtaccaaaaaagaagtttctacatagggaagattttagtgatgtct aaaactggtccattacataaagccacaactggtcacaatgctgaggtcaa ctgctcatggagtaccctgccctgacagattcatctacagcacagttcct gcatctgggcctcaggaaatatcacagaaaggggggtggggagaaattgt aagaaccagaagaccaagaggtctactgttaaattgtgtaacctaggggg tgccaaggaggctacacccatgatgcctcaatgaattaggtacatagaaa agaccagaacagtgacaataacaatgcacatgctgtggcagaagaagatg tctcacaggatccgacctccaaagaactacacagaacatgactactgaca gaagaactggtctcttatacagacagataagcccccagttggctatctaa tacagaatagttagccctgaaactgtgtacacacaagccacaccaatgga cataggggagtgtgtgtgtgtgtgt	gaattcttttcagcaggagctcagcatcctgcctagcctcctatcctcct gtatcccatcgcacaacagatccttggtgatagctctcgcagctcacctt gctctcaatgcaccctggaattggctgccaattgtatagaaactccactt atttcccttagcgtttttctcattgcttctctatttaaatctttgagccc tgtggtgttcctttgagcaattttacttgtagacctcaacctgactttag gacactagcaaacatctatgtaaaccagaagaaaatgactctgaagtgcg aatgaagcctgtagttacggttttcatctttccagccaccctttatgttg tcattgtcaccctctggttcctctttgattgacacatgagagaaagaaac ttggaaataaattcaaatgggaaaagaaactggctttctcatatacacgc gtttcaccattatttacattacctcggtcgggctgaactcaggacctaat gcctcttcgagaatgtgttacctttagctatatatccctaatcctcataa ttcatcctattttaaaacatgctttctaagcaaaaccagaagaggagtta gataaaaagagcaaagtcataactcccaccgagctaagcctcttttaacg tttgttgagtgcaacgtgtaagatcaatgttgcttgaaacacaacttgat tcagcactgcatttgcttatcccagacataatgaagagtacaacataaat aataatatattacatcacagcaagtagtatcctttggctacttttttttt tttaacagttgaataaactgagttcagggggtggaagaattttcctaagg tcatgagttgtatgtagaagaactatcaagtgaagacatggtttactggt attctaaaattgtggatttttttttttttcctgctaagcgtgcaccacat gggattttttttttctcctgctaagcgtgccaccacatgcttctttaaac agctgaggatcttggtatagaccagttactattaaacactttggggaagg agaatcagagaaagacccaatctaaat
quality values	Open. Hide. 62 41 28 31 62 62 62 62 62 62 62 62 41 39 49 62 62 62 62 62 62 62 54 62 45 59 62 59 62 62 59 59 51 38 59 56 38 37 34 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 49 49 54 62 62 62 62 59 59 62 62 59 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 62 62 62 62 62 54 42 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 46 62 62 62 62 62 62 62 62 62 58 58 58 58 58 54 52 58 58 49 49 42 58 52 58 54 54 58 58 58 58 58 58 58 58 58 58 54 54 58 58 54 58 58 54 58 54 58 52 58 58 58 58 58 58 58 58 58 52 58 54 58 54 58 58 58 42 39 58 58 58 54 58 54 58 58 58 47 58 58 54 48 58 58 58 58 53 54 58 58 58 58 51 47 58 58 42 51 54 58 58 53 58 58 53 58 58 58 58 50 58 37 45 51 50 58 46 52 52 58 58 58 39 49 41 58 58 58 58 49 50 58 58 58 58 51 53 53 58 58 58 58 58 53 58 58 50 51 50 58 49 29 58 58 52 54 39 58 50 50 58 53 53 50 50 33 58 46 50 50 58 50 51 30 54 53 52 51 31 54 58 50 58 50 37 52 50 50 50 51 42 52 58 50 40 50 54 53 46 49 51 52 53 54 54 47 41 49 49 54 52 39 54 37 41 53 53 51 49 52 53 52 50 50 53 53 39 51 37 51 53 54 37 54 54 40 52 54 37 52 54 54 54 41 35 52 53 43 45 52 40 52 53 53 53 42 33 52 53 47 52 37 52 51 51 37 52 29 35 44 39 40 42 33 35 39 46 46 54 41 40 53 53 45 53 53 32 45 32 52 32 42 32 37 32 40 40 31 34 34 42 47 25 47 52 51 46 27 31 33 53 32 30 49 51 41 33 13 53 52 53 53 51 45 51 31 46 31 51 21 20 31 27	Open. Hide. 62 47 31 39 62 62 62 62 62 62 39 29 51 56 44 50 49 28 38 56 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 49 47 58 58 46 46 54 58 52 47 46 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 54 58 58 58 58 58 58 58 54 52 54 58 54 58 58 54 54 58 54 58 54 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 52 54 58 58 52 54 58 54 37 58 51 53 58 58 58 58 58 58 53 58 51 51 52 52 53 58 51 38 58 49 58 54 58 52 49 58 58 58 58 53 53 58 54 53 54 52 51 51 58 58 58 58 58 58 58 58 58 58 49 50 51 51 51 51 51 58 51 52 49 54 58 51 58 53 58 58 52 53 51 54 44 50 50 49 54 48 49 48 58 51 53 52 58 50 54 50 53 58 51 46 54 49 50 58 50 50 54 26 58 51 37 51 49 54 49 39 32 50 49 58 58 58 49 54 40 50 44 43 49 52 51 50 34 54 52 50 51 54 42 54 44 40 39 39 44 53 42 50 47 47 51 40 44 44 52 45 42 25 49 50 29 35 38 37 41 54 51 54 40 44 50 52 37 50 51 37 42 52 50 51 40 54 41 31 47 40 39 30 40 32 38 38 54 35 41 49 37 42 39 52 32 54 37 52 34 53 31 38 47 51 54 52 31 40 51 45 37 35 42 37 42 53 53 53 32 41 54 51 42 45 45 53 40 42 33 52 38 31 39 39 26 31 45 29 31 45 53 26 47 35 53 29 40 35 32 32 53 38 31 53 35 52 32 34 32 45 40 33 34 33 31 36 37 31 32 31 45 29 45 41 31 30 31 31 51 31 31 51 36 39 35 31 31 31 34 33 26 47 31 36 32 28 30 28 31 31 51 51 51 48 48 48 48 48 48 48 36 30 30 31 30 31 33 32 31 21 14 28 32 48 35 30 31 43 31 23 38 34 36 6 10 32 48 48 31 28 42 31 26 32 30 27 24 26 48 48 37 33 37 31 22 20 7 18 28 31 25 31 35 46 31 48 41 42 35 31 30 39 38 30 32 35 24 8 39 32 20 30 32 31 31 27 22 33 31 42 22 32 23 32 21 9 23 31 38 25 47 25 31 31 21 31 31 11 27 21 30 34 32 32 44 41 21 11 22 42 23 24 24 21 28 48 44 48 48 48 48 48 48 48 48 43 31 9 22 24 34 28 32 20 21 27 32 32 28 26 34 12 19 25 19 23 19 32 30 47 19 30 22 39 48 48 48 48 48 48 39 11 19 16 10 30 12 30 22 32 23 25 16 28 21 16 14 19 5 9 4 13 5 8 11 17 16 3 8 5 11 15 30 8 10 26 7 14 27 28 24 20 11 3 3 3 3 13 16 11 20 9 21 17 30 4 3 8 22 10 27 8 17 25 26 24 27 10 15 9 4 12 26 7 18 13 17 21 38 21 10 25 30 17 16 8 5 5 11 5 8 20 8 11 6 5 22 5 22 30 8 14 9 7 22 9 22 22 15 18 20 9 20 17 21

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_86338474_86339248
seq2: B6Ng01-237A06.b_46_820

seq1  GAATTCTTCCTGATGCTCTGTGGAATTGCTGAAGCTGAGTAAACAATGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCTGATGCTCTGTGGAATTGCTGAAGCTGAGTAAACAATGTA  50

seq1  TGTTCTTCCTCTTCAGGGAGAACAATATTGTACTGATTTAGATGGATGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTCCTCTTCAGGGAGAACAATATTGTACTGATTTAGATGGATGCC  100

seq1  CAACCAACTCAATTAATACCTGGGGGCAAGAATATGATTTGTTTCCAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAACTCAATTAATACCTGGGGGCAAGAATATGATTTGTTTCCAAAT  150

seq1  TGCGCCCATCCTAAATCGAGGAGGTGAACATGGAAATGACATATTTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCCCATCCTAAATCGAGGAGGTGAACATGGAAATGACATATTTATTT  200

seq1  TAGGACTGGTTCTCATCTTTACACACACACACACACACAGCACCCTTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACTGGTTCTCATCTTTACACACACACACACACACAGCACCCTTTAT  250

seq1  CTCAGTACCAAAAAAGAAGTTTCTACATAGGGAAGATTTTAGTGATGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTACCAAAAAAGAAGTTTCTACATAGGGAAGATTTTAGTGATGTCT  300

seq1  AAAACTGGTCCATTACATAAAGCCACAACTGGTCACAATGCTGAGGTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGGTCCATTACATAAAGCCACAACTGGTCACAATGCTGAGGTCAA  350

seq1  CTGCTCATGGAGTACCCTGCCCTGACAGATTCATCTACAGCACAGTTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCATGGAGTACCCTGCCCTGACAGATTCATCTACAGCACAGTTCCT  400

seq1  GCATCTGGGCCTCAGGAAATATCACAGAAAGGGGGGTGGGGAGAAATTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTGGGCCTCAGGAAATATCACAGAAAGGGGGGTGGGGAGAAATTGT  450

seq1  AAGAACCAGAAGACCAAGAGGTCTACTGTTAAATTGTGTAACCTAGGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACCAGAAGACCAAGAGGTCTACTGTTAAATTGTGTAACCTAGGGGG  500

seq1  TGCCAAGGAGGCTACACCCATGATGCCTCAATGAATTAGGTACATAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGGAGGCTACACCCATGATGCCTCAATGAATTAGGTACATAGAAA  550

seq1  AGACCAGAACAGTGACAATAACAATGCACATGCTGTGGCAGAAGAAGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGAACAGTGACAATAACAATGCACATGCTGTGGCAGAAGAAGATG  600

seq1  TCTCACAGGATCCGACCTCCAAAGAACTACACAGAACATGACTACTGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACAGGATCCGACCTCCAAAGAACTACACAGAACATGACTACTGACA  650

seq1  GAAGAACTGGTCTCTTATACAGACAGATAAGCCCCCAGTTGGCTATCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAACTGGTCTCTTATACAGACAGATAAGCCCCCAGTTGGCTATCTAA  700

seq1  TACAGAATAGTTAGCCCTGAAACTGTGTACACACAAGCCACACCAATGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAATAGTTAGCCCTGAAACTGTGTACACACAAGCCACACCAATGGA  750

seq1  CATAGGGGAGTGTGTGTGTGTGTGT  775
      |||||||||||||||||||||||||
seq2  CATAGGGGAGTGTGTGTGTGTGTGT  775

seq1: chr5_86502100_86503175
seq2: B6Ng01-237A06.g_63_1139 (reverse)

seq1  ATTTAGATTTGGTCTTTCTCTGATTCTC--TTCCCAAAGTGTTT-ATAGT  47
      ||||||||| ||||||||||||||||||  | |||||||||||| |||||
seq2  ATTTAGATTGGGTCTTTCTCTGATTCTCCTTCCCCAAAGTGTTTAATAGT  50

seq1  AACTGGGTCTATTACCAAGATCCTTCAGCTGTTTAAAGAAGCCATGTGGT  97
      |||| |||||| ||||||||||| ||||||||||||||||| ||||||||
seq2  AACT-GGTCTA-TACCAAGATCC-TCAGCTGTTTAAAGAAG-CATGTGGT  96

seq1  GGCACGCTTAGCAGGAG-AAAAAAAAATCCCATGTGGTGGCACGCTTAGC  146
      ||||||||||||||||| |||||||||||||||||||| |||||||||||
seq2  GGCACGCTTAGCAGGAGAAAAAAAAAATCCCATGTGGT-GCACGCTTAGC  145

seq1  AGG-AAAAAAAAAAAATCCACAATTTTAGAATACCAGTAAACCATGTCTT  195
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAAAAAAAAAATCCACAATTTTAGAATACCAGTAAACCATGTCTT  195

seq1  CACTTGATAGTTCTTCTACATACAACTCATGACCTTAGGAAAATTCTTCC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGATAGTTCTTCTACATACAACTCATGACCTTAGGAAAATTCTTCC  245

seq1  ACCCCCTGAACTCAGTTTATTCAACTGTT-AAAAAAAAAAAGTAGCCAAA  294
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ACCCCCTGAACTCAGTTTATTCAACTGTTAAAAAAAAAAAAGTAGCCAAA  295

seq1  GGATACTACTTGCTGTGATGTAATATATTATTATTTATGTTGTACTCTTC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACTACTTGCTGTGATGTAATATATTATTATTTATGTTGTACTCTTC  345

seq1  ATTATGTCTGGGATAAGCAAATGCAGTGCTGAATCAAGTTGTGTTTCAAG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTCTGGGATAAGCAAATGCAGTGCTGAATCAAGTTGTGTTTCAAG  395

seq1  CAACATTGATCTTACACGTTGCACTCAACAAACGTTAAAAGAGGCTTAGC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTGATCTTACACGTTGCACTCAACAAACGTTAAAAGAGGCTTAGC  445

seq1  TCGGTGGGAGTTATGACTTTGCTCTTTTTATCTAACTCCTCTTCTGGTTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTGGGAGTTATGACTTTGCTCTTTTTATCTAACTCCTCTTCTGGTTT  495

seq1  TGCTTAGAAAGCATGTTTTAAAATAGGATGAATTATGAGGATTAGGGATA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAGAAAGCATGTTTTAAAATAGGATGAATTATGAGGATTAGGGATA  545

seq1  TATAGCTAAAGGTAACACATTCTCGAAGAGGCATTAGGTCCTGAGTTCAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCTAAAGGTAACACATTCTCGAAGAGGCATTAGGTCCTGAGTTCAG  595

seq1  CCCGACCGAGGTAATGTAAATAATGGTGAAACGCGTGTATATGAGAAAGC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGACCGAGGTAATGTAAATAATGGTGAAACGCGTGTATATGAGAAAGC  645

seq1  CAGTTTCTTTTCCCATTTGAATTTATTTCCAAGTTTCTTTCTCTCATGTG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCTTTTCCCATTTGAATTTATTTCCAAGTTTCTTTCTCTCATGTG  695

seq1  TCAATCAAAGAGGAACCAGAGGGTGACAATGACAACATAAAGGGTGGCTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCAAAGAGGAACCAGAGGGTGACAATGACAACATAAAGGGTGGCTG  745

seq1  GAAAGATGAAAACCGTAACTACAGGCTTCATTCGCACTTCAGAGTCATTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATGAAAACCGTAACTACAGGCTTCATTCGCACTTCAGAGTCATTT  795

seq1  TCTTCTGGTTTACATAGATGTTTGCTAGTGTCCTAAAGTCAGGTTGAGGT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGGTTTACATAGATGTTTGCTAGTGTCCTAAAGTCAGGTTGAGGT  845

seq1  CTACAAGTAAAATTGCTCAAAGGAACACCACAGGGCTCAAAGATTTAAAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAGTAAAATTGCTCAAAGGAACACCACAGGGCTCAAAGATTTAAAT  895

seq1  AGAGAAGCAATGAGAAAAACGCTAAGGGAAATAAGTGGAGTTTCTATACA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGCAATGAGAAAAACGCTAAGGGAAATAAGTGGAGTTTCTATACA  945

seq1  ATTGGCAGCCAATTCCAGGGTGCATTGAGAGCAAGGTGAGCTGCGAGAGC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCAGCCAATTCCAGGGTGCATTGAGAGCAAGGTGAGCTGCGAGAGC  995

seq1  TATCACCAAGGATCTGTTGTGCGATGGGATACAGGAGGATAGGAGGCTAG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACCAAGGATCTGTTGTGCGATGGGATACAGGAGGATAGGAGGCTAG  1045

seq1  GCAGGATGCTGAGCTCCTGCTGAAAAGAATTC  1076
      ||||||||||||||||||||||||||||||||
seq2  GCAGGATGCTGAGCTCCTGCTGAAAAGAATTC  1077

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BAC

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Alignment Information