BAC Information

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BAC

Clone NameB6Ng01-238G02
Chromosome5 (Build37)
Map Location 11,207,382 - 11,207,853
singlet/doubletsinglet
Overlap geneLOC100042819
Upstream geneLOC100041395, LOC381612, EG625586, LOC242809, LOC623849, LOC100041408, LOC667880, EG667888, EG667901, EG667907, LOC667916, LOC100041472, EG545728, LOC667942
Downstream geneLOC667948, EG667949, Speer1-ps1, EG667956, LOC667961, EG667967, LOC100042858, LOC667974, EG667986, EG623898, EG668001, LOC668008, EG668011, LOC668017, EG668021, LOC623998, EG668043, LOC545732, LOC384144
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238G02.bB6Ng01-238G02.g
ACCGA049091GA049092
length4661,211
definitionB6Ng01-238G02.b B6Ng01-238G02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
agcatagcgacacactattggcttattcaaacatcagcagaaaaattaca
tgtacgtgcagggtgtcagagttctgtgaattgttgactcagtttagata
gccctgttatgtcctcacattcctctttatctttaaggttaagctgttcc
caggaatatttaactacggggcatacccaggtttgcttttcttttttctc
agccccaggcagcctctagactcacaaacaaccagcaatttctgagtact
ttatatgacttacaggtcttgaaatttcatctttctttcactaggaaagg
gaatataattctcttttgagcatgtgtccactgttaattttccatggtgc
acttcacacagaaaatcagaataatcagaatgtgatgaggatgaatcatt
ccatagcagctacgtcagtattgaagcagttgacaaaattctcctggggg
gggggggtatttgtag
gaattccatgtgaaaatgtcttccctactggctatatttcttagtgccag
aaggtaatacgcaggctgataggggagaagagacatcagtggtcttaccc
agtactacaaatacccctcccccccaaggagaagtttgtcaactgcttca
atactgacgtagctgctatggaatgattcatcctcatcacattttgatta
ttcttattttctgtgtgaagtgcaccatggaaaattaaaagtggacacat
gctcaaaagagaattatattccctttcctagtgaaagaaatatgaaattt
caagacctgtaagtcatataaagtcctcagaaattgctggttgtttgtga
gtctagaggctgcctggggctgagaaaaaagaaaagcaaacctggatatg
ccccgtagttaaaatattcctgggaacagcttaaccttaaagataaagag
gaatgtgaggacataacagggctatctaaactgagtcaacaattcacaga
actctgacaccctgcacgtacatgtaatttttctgctgatgtttgaataa
gccaatagtgtgttgatatgctgaattccacatccttaagacccttaacc
cataaaaactcctagcttcctagcctcgtggccatcatccgttatctcct
gtgtgggatgcatgtcagcctggagctccataattaaatgacctcatgta
attacatcaagatggtccttcacgattttttgggtgcacaacgaatcggg
tattgagttggggtttccccactaggttctatcactagcaactaccattg
agagtagtttccaccaataagggacatggcatgaagaacacccttattat
ctatgctcagattaggcttgctgtgttttcagcaagtcttgtgcaagtag
caacacatgagcttcctctcagttcatgagtgtaataattatgtcatcct
ttaggagacagaatttcctagcactcttcttcaccctttaagacctttcc
attctttctacttctcttcaacagggttttccacagctttgggccaagct
tggaggggcaacaagtgttaacctctatgcttcaatcagccctgaagtct
tcagtctgtgaaatcttctgcaccttggccagaagcaacttccattcctt
tcaattaaattaacttcaacttggaaagaaaagattgagatattcgtgag
caccagatagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_11207382_11207853
seq2: B6Ng01-238G02.b_41_512

seq1  GAATTCAGCATAGCGACACACTATTGGCTTATTCAAACATCAGCAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATAGCGACACACTATTGGCTTATTCAAACATCAGCAGAAAA  50

seq1  ATTACATGTACGTGCAGGGTGTCAGAGTTCTGTGAATTGTTGACTCAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATGTACGTGCAGGGTGTCAGAGTTCTGTGAATTGTTGACTCAGTT  100

seq1  TAGATAGCCCTGTTATGTCCTCACATTCCTCTTTATCTTTAAGGTTAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGCCCTGTTATGTCCTCACATTCCTCTTTATCTTTAAGGTTAAGC  150

seq1  TGTTCCCAGGAATATTTAACTACGGGGCATACCCAGGTTTGCTTTTCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCAGGAATATTTAACTACGGGGCATACCCAGGTTTGCTTTTCTTT  200

seq1  TTTCTCAGCCCCAGGCAGCCTCTAGACTCACAAACAACCAGCAATTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAGCCCCAGGCAGCCTCTAGACTCACAAACAACCAGCAATTTCTG  250

seq1  AGTACTTTATATGACTTACAGGTCTTGAAATTTCATCTTTCTTTCACTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTTTATATGACTTACAGGTCTTGAAATTTCATCTTTCTTTCACTAG  300

seq1  GAAAGGGAATATAATTCTCTTTTGAGCATGTGTCCACTGTTAATTTTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGAATATAATTCTCTTTTGAGCATGTGTCCACTGTTAATTTTCCA  350

seq1  TGGTGCACTTCACACAGAAAATCAGAATAATCAGAATGTGATGAGGATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCACTTCACACAGAAAATCAGAATAATCAGAATGTGATGAGGATGA  400

seq1  ATCATTCCATAGCAGCTACGTCAGTATTGAAGCAGTTGACAAAATTCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCCATAGCAGCTACGTCAGTATTGAAGCAGTTGACAAAATTCTCC  450

seq1  TGGGGGGGGGGGTTATTTGTAG  472
      |||||||||||| |||||||||
seq2  TGGGGGGGGGGGGTATTTGTAG  472