BAC Information

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BAC

Clone NameB6Ng01-240F01
Chromosome5 (Build37)
Map Location 9,146,447 - 9,147,167
singlet/doubletsinglet
Overlap geneDmtf1
Upstream geneAdam22, Dbf4, Slc25a40, Gm440, Abcb1a, EG330031, Abcb1b, Abcb4, Crot, 4930420K17Rik
Downstream geneLOC654361, 9330182L06Rik, Grm3, LOC100042768, LOC625446, LOC435832
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240F01.bB6Ng01-240F01.g
ACCGA050516GA050517
length913901
definitionB6Ng01-240F01.b B6Ng01-240F01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattctttttaatagctgagtagtactccattgtgtaaatgtacc
acatttttgtatccattcctctgttgagggatatctgggttctttccagc
ttctggctattataaataaggctgctatgaacatagtggagcatgtgtcc
ttcttacccgttggggcatcttcgggatatatgcccaggagaggtattgc
gggatcttccggtagtactatgtccaattttctgaggaaccgccagactg
atttccagagtggttgtacaagcctgcaatcccaccaacaatggaggagt
gttcctctttctccacatccacgccagcatctgctgtcacctgaattttt
gatcttagccattctgactggtgtgaggtggaatctcagggttgttttga
tttgcatttccctgatgattaaggatgttgaacattttttcaggtgtttc
tcagcctttcggtattcctcgggtgagaattctttgttcagctctgagcc
ccaccttttaagggggctatttgattttctggagtccaccttcttgagtt
ctttatatatattggatattactcccctatctgatttaagataggtaaag
atcctttcccaatctgttggtggtctttttgtcttattgacggtgtcttt
tgccttgcagaaagctttgcagtttcatgaggtcccatttgtcaatcctc
gatcttaaagcacaagccattgctgttctattcaggaattttttccctgt
gcccatatcttcgagactttttccccactttctcctctataagtttcagt
gtctctgggtttatgtggaagttcccttgatccacttagatttgacctta
gtacaaggagagaggtttgtatccatggccaacttgtcaggcagtaatca
cccaatcactgca
gaattcattttgatatgatcctttcctttctattataaaatatttgtaac
aatcatttccttaaagttaagtcttatttgtatgtcttggatcttttttt
ttcttttaatctgagttacttctaaacacctactacaacttcaagctcaa
gaaatttagaatcaagaggttcttgctctgcttgatctagtttgttaaag
ctcgattttaaacttgcatttaccaagttctttagctctaaactttgtgt
atttttataatgtgtgagtatatatatatactctctctgggttctttact
tagaacagaaggtatttttctaatttcactgaactgtttgcattttctta
attacagttattatttaaactactaaacttttaaaaaggcaactgatgta
tttccttttccttgaacttgccacctttggctgtgttcttttggcagtaa
tgaccttctttttcatatctttgtccgtatatgtattaaaatatataacc
ctgtacattggcttctaccaattttagaagtagcagaagtactttctcct
agagatgtgccttggatttgctgggcaggctactctggcttggattccag
gtagacacagtacttaagtgtttatgttaatcagcacctggaatacctat
gggcgactcaatgggcctagaccagagtatgagtgggattgtcctacctg
taagatggagatggtttgcaagtggttctatgcattacttgctcactttc
agtatctatggctgatatagtccattatggtgaaccactatggttccttc
taagcagatgtagtcagtgtgctatgagataaagtacctgctaacttata
aagctatgtgcaaaaccatctactcgtgaggttcacatacacgaggtggt
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_9146447_9147167
seq2: B6Ng01-240F01.g_252_966

seq1  CTAGTTTGTTAAAGCTCGATTTTAAACTTGCATTTACCAAGTTCTTTAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTGTTAAAGCTCGATTTTAAACTTGCATTTACCAAGTTCTTTAGC  50

seq1  TCTAAACTTTGTGTATTTTTATAATGTGTGAGTATATATATATACTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACTTTGTGTATTTTTATAATGTGTGAGTATATATATATACTCTCT  100

seq1  CTGGGTTCTTTACTTAGAACAGAAGGTATTTTTCTAATTTCACTGAACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTCTTTACTTAGAACAGAAGGTATTTTTCTAATTTCACTGAACTG  150

seq1  TTTGCATTTTCTTAATTACAGTTATTATTTAAACTACTAAACTTTTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATTTTCTTAATTACAGTTATTATTTAAACTACTAAACTTTTAAAA  200

seq1  AGGCAACTGATGTATTTCCTTTTCCTTGAACTTGCCACCTTTGGCTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACTGATGTATTTCCTTTTCCTTGAACTTGCCACCTTTGGCTGTGT  250

seq1  TCTTTTGGCAGTAATGACCTTCTTTTTCATATCTTTGTCCGTATATGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGGCAGTAATGACCTTCTTTTTCATATCTTTGTCCGTATATGTAT  300

seq1  TAAAATATATAACCCTGTACATTGGCTTCTACCAATTTTAGAAGTAGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATATAACCCTGTACATTGGCTTCTACCAATTTTAGAAGTAGCAG  350

seq1  AAGTACTTTCTCCTAGAGATGTGCCTTGGATTTGCTGGGCAGGCTACTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACTTTCTCCTAGAGATGTGCCTTGGATTTGCTGGGCAGGCTACTCT  400

seq1  GGCTTGGATTCCAGGTAGACACAGTACTTAAGTGTTTATGTTAATCAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGGATTCCAGGTAGACACAGTACTTAAGTGTTTATGTTAATCAGCA  450

seq1  CCTGGAATACCTATGGGCGACTCAAT-GGCCTAGACCAGAGTATGAGTGG  499
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCTGGAATACCTATGGGCGACTCAATGGGCCTAGACCAGAGTATGAGTGG  500

seq1  GATTGTCCTACCTGTTAAGATGGAGATGGTTTGCAAGTGGTTCTATGCAT  549
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GATTGTCCTACCTG-TAAGATGGAGATGGTTTGCAAGTGGTTCTATGCAT  549

seq1  TACTTGCTCACTTTCAGTATCTATGGCTGATATAGTCAATTATGGTGAAA  599
      ||||||||||||||||||||||||||||||||||||| ||||||||| ||
seq2  TACTTGCTCACTTTCAGTATCTATGGCTGATATAGTCCATTATGGTG-AA  598

seq1  CCACTATGGTTCCTTCTAGGCAAGATGTAGTCAGTGTGGCTATGGAGATA  649
      |||||||||||||||||| || ||||||||||||||| ||||| ||||||
seq2  CCACTATGGTTCCTTCTAAGC-AGATGTAGTCAGTGT-GCTAT-GAGATA  645

seq1  AAGTACCTGCTAACTTATAAAAGCTATGTGCAAACACATCTACTCTGTAG  699
      |||||||||||||||||| |||||||||||||||  |||||||||   ||
seq2  AAGTACCTGCTAACTTAT-AAAGCTATGTGCAAAACCATCTACTCGTGAG  694

seq1  GTTCAACATACAACGA-GTGGTG  721
      |||| |||||| |||| ||||||
seq2  GTTC-ACATAC-ACGAGGTGGTG  715