BAC Information

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BAC

Clone NameB6Ng01-240J15
Chromosome5 (Build37)
Map Location 7,486,338 - 7,487,391
singlet/doubletsinglet
Overlap genenone
Upstream geneEG435830, LOC100042651, 4921511H03Rik, LOC242823
Downstream geneLOC667767, EG546855, Steap4, Sri, LOC433840, Adam22, Dbf4, Slc25a40
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240J15.bB6Ng01-240J15.g
ACCGA050730GA050731
length1,0441,157
definitionB6Ng01-240J15.b B6Ng01-240J15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacaggaaccctccacccatgcctacaagagaggcaagtaggca
attgaagcaggtaggccagcttcagatcattactctctccctcctctcct
ccaaatccaatagcccagtcccatcccaagctctgtagcagacaacctgt
tgtggcccctccttaatctctgttccagttcccaggggactaaggagagt
aaaacaccctccttccttccatcctgaggaaaattctcagcatgccccac
actcctagtccatccctatttttaattgtcagctagcaatatctagaaaa
caaacacccacccaacaaagacaagatcagaaatcagcaatatttatata
aaaatccacataatatgataactctataaaacagcaaatacttgtgaaat
tttccatatgtgaaaatcacttattttaccaggttttaagataacttgca
aaggaataatgataaaatgaattttcaaatgatcctgtttccaagctact
atcaatacaaactgctaacagatgtggaagaaacatttataaacaaagca
ttttaatattttcttgataagtatatggatttattatcaatagatacatc
aagtaaaatttttatagtgaaggtggttcacgtgaagcatttaggtgata
gcacttatagagacttgcataggagttatacagtgctattaattcctgct
attctctggtgcagtgcagaactgtcacttagggccaggtagttaaatac
ttgagagaggataccaggctttgacatcagtcatttgcaaactgcaagat
tcaaaaggtactaatcttgcctgcagcataatcagcagcacagaccttta
atcccatggttcaggagatgatccaggaagatcagtgccaaactaggcta
tctagttgacagagggaaagggagaattggtaggagaaaaggagatgagg
gagggaatgacaaaagagaaaggcaggagagaggtgggatgcagaaaaga
tgatgatgagagaagaagaaaggggaagaaaaagagagtgcacg

gaattctcacctgaggaatacagaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctaagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcttgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagcattatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtagacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatta
aagggtggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgcccacagtcagctaatgacgatcacagggctcccaat
ggaggagctagagaaagtaccaagagctaaagggatctgcaccctatagt
gatcacatatgactacagtaccccgagctctgactctagctgcatatgta
tcaaagatgacttagtccgcaatcacttgaaagaagagtcatggaccaca
actttaatggcctgacggacgcaggctaagggatggccgcttaggggatg
tagcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_7486338_7487391
seq2: B6Ng01-240J15.b_42_1085

seq1  GAATTCCACAGGAACCCTCCACCCATGCCTACAAGAGAGGCAAGTAGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGGAACCCTCCACCCATGCCTACAAGAGAGGCAAGTAGGCA  50

seq1  ATTGAAGCAGGTAGGCCAGCTTCAGATCATTACTCTCTCCCTCCTCTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGCAGGTAGGCCAGCTTCAGATCATTACTCTCTCCCTCCTCTCCT  100

seq1  CCAAATCCAATAGCCCAGTCCCATCCCAAGCTCTGTAGCAGACAACCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATCCAATAGCCCAGTCCCATCCCAAGCTCTGTAGCAGACAACCTGT  150

seq1  TGTGGCCCCTCCTTAATCTCTGTTCCAGTTCCCAGGGGACTAAGGAGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCCCCTCCTTAATCTCTGTTCCAGTTCCCAGGGGACTAAGGAGAGT  200

seq1  AAAACACCCTCCTTCCTTCCATCCTGAGGAAAATTCTCAGCATGCCCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACCCTCCTTCCTTCCATCCTGAGGAAAATTCTCAGCATGCCCCAC  250

seq1  ACTCCTAGTCCATCCCTATTTTTAATTGTCAGCTAGCAATATCTAGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTAGTCCATCCCTATTTTTAATTGTCAGCTAGCAATATCTAGAAAA  300

seq1  CAAACACCCACCCAACAAAGACAAGATCAGAAATCAGCAATATTTATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACCCACCCAACAAAGACAAGATCAGAAATCAGCAATATTTATATA  350

seq1  AAAATCCACATAATATGATAACTCTATAAAACAGCAAATACTTGTGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCACATAATATGATAACTCTATAAAACAGCAAATACTTGTGAAAT  400

seq1  TTTCCATATGTGAAAATCACTTATTTTACCAGGTTTTAAGATAACTTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATATGTGAAAATCACTTATTTTACCAGGTTTTAAGATAACTTGCA  450

seq1  AAGGAATAATGATAAAATGAATTTTCAAATGATCCTGTTTCCAAGCTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATAATGATAAAATGAATTTTCAAATGATCCTGTTTCCAAGCTACT  500

seq1  ATCAATACAAACTGCTAACAGATGTGGAAGAAACATTTATAAACAAAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATACAAACTGCTAACAGATGTGGAAGAAACATTTATAAACAAAGCA  550

seq1  TTTTAATATTTTCTTGATAAGTATATGGATTTATTATCAATAGATACATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATATTTTCTTGATAAGTATATGGATTTATTATCAATAGATACATC  600

seq1  AAGTAAAATTTTTATAGTGAAGGTGGTTCACGTGAAGCATTTAGGTGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAATTTTTATAGTGAAGGTGGTTCACGTGAAGCATTTAGGTGATA  650

seq1  GCACTTATAGAGACTTGCATAGGAGTTATACAGTGCTATTAATTCCTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTATAGAGACTTGCATAGGAGTTATACAGTGCTATTAATTCCTGCT  700

seq1  ATTCTCTGGTGCAGTGCAGAACTGTCACTTAGGGCCAGGTAGTTAAATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTGGTGCAGTGCAGAACTGTCACTTAGGGCCAGGTAGTTAAATAC  750

seq1  TTGAGAGAGGATACCAGGCTTTGACATCAGTCATTTGCAAACTGCAAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAGAGGATACCAGGCTTTGACATCAGTCATTTGCAAACTGCAAGAT  800

seq1  TCAAAAGGTACTAATCTTGCCTGCAGCATAATCAGCAGCACAGACCTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGGTACTAATCTTGCCTGCAGCATAATCAGCAGCACAGACCTTTA  850

seq1  ATCCCATGGTTCAGGAGATGATCCAGGAAGATCAGTGCCAAACTAGGCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCATGGTTCAGGAGATGATCCAGGAAGATCAGTGCCAAACTAGGCTA  900

seq1  TCTAGTTGACAGAGGGAAAGGGAGAATTGGTAGGAGAAAAGGAGATGAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCTAGTTGACAGAGGGAAAGGGAGAATTGGTAGGAGAAAAGGAGATG-AG  949

seq1  GGAGGGAATGACAAAAAGAGAAAGGCAGGAAGAGAGTGGGAATGCAGAAA  1000
      |||||||||||| |||||||||||||||| ||||||  || |||||||||
seq2  GGAGGGAATGAC-AAAAGAGAAAGGCAGG-AGAGAGGTGGGATGCAGAAA  997

seq1  AAGAAGGATGGAATGA--AGAGAAGAAAGAAAAGGGGAAGAAAAAGAGAG  1048
      |     ||||  ||||  |||||||||   ||||||||||||||||||||
seq2  A-----GATG--ATGATGAGAGAAGAA--GAAAGGGGAAGAAAAAGAGAG  1038

seq1  TGCACG  1054
      ||||||
seq2  TGCACG  1044


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