BAC Information

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BAC

Clone NameB6Ng01-242G07
Chromosome5 (Build37)
Map Location 59,596,176 - 59,596,940
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041385, LOC100041396, LOC666499, EG625870
Downstream geneLOC100041425, LOC546866
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242G07.bB6Ng01-242G07.g
ACCGA052050GA052051
length1,1831,157
definitionB6Ng01-242G07.b B6Ng01-242G07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatggcagagaagcagctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgatat
tccacttcactccagtcagaatggctaagatcaaaaactcaggttacagc
agatgctggtgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcccacaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagatgaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctatttaaaaaaatgaatttatgaaattcctaggcaa
atggatgtacctggagggtatcatcctgagtgaagtaacccaatcacaaa
ggaactcgcacaatatgtactaactgataagtggatattagcccagaaac
ttaggataccctagatataagatacaacttgccaaacacatgaaattcaa
gaagaactaagaccaaagttggacactttaccctttcttagaaatgggaa
caaaacacctatagaaggagttacagagacaaaatttggagctgtgacga
aaggatggaccatctagtgattgccatatgcagggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttgctgaaa
ggacccatatatagctctctcttgtgagactatgccagggcctagcaaac
acagaagtggatgatcacagtggatgggtcacacgggccccaatggagga
gctagagaaattacccaaggagctaaagggaactgcaccctatagatgaa
cacatttgaactaaccagtaccgggagctcttgtcttcagctgcatatgt
atcaaaagatgcctagtcagcatcactgcaagaagaggtcatggactgca
atttatatggctcagttacagggaacaccaggccaaggattggctggatt
aggcttacttagtccgtcgtcagtatacgacta
gaattcagaggcattcttttcaagcagagcaattcagtcagaagccaaga
gaaaaccatgtaaaccagtgatcttggagtggagtttgagccagaacagc
tgagttgaaccagcctgccagagttctaaatgagctagaaagggtgagtt
tttttcagcagaaaacctccaagctaactgcatctggcgaataaaatata
taattatatctgacattttacatgatcaaagaaggagagagcccaccaat
attgcagaaagcaatggataggagacatctgacaaaaagctgcagaaaaa
taattcacctgggattgtctccagatgaaacttcaatttttggattctac
tggatacctagagagactcaggagattccaaagcaaccagagcctcaacc
acagagtaaagaatgacacagcatcttctaagaaacatcatacaataagc
caaccccaaagacaattttaattatatggttagacttttgtttcattgga
aaattggaaactttatttcagcttcccaaagatgagctataggagttgag
gggaaagctgaatcacagtatttattgcaattgtgaccaccagaacaaaa
accctccctacttttacttgcaatctttatatattttctctccaaagaag
ttaaaataatatctatacaacaagaaaaaaagtttcaaagaaggttgaaa
aataactgtacaacaacaaaaatagctgtagaaaaagttatctgtgatag
ttcaaaggcttgagagaaaaatcaataaagaagataaaacaagaaattcc
taatttcaactctatggtatataataaaattgaggatcaagatagacagc
ccactgaatttatattgccatctgttaatgaaattaagtaataatatata
tatatatataaatgggaacaaaacaccccatggaaaggagttacagagtc
aaaatttgggagcagtgacgaaaagatgggaccatctagtgattgccata
tccagggatccatcccatatcagcttccaaatgctgacaccattgcataa
cactagggaggatttggctgaagaccagatatagctgtctcttgtgagac
tatgccggcctagcaaacacgagtgcatgctcacagtcaggcatcccgat
tggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_59596176_59596940
seq2: B6Ng01-242G07.g_459_1221

seq1  TCAACCACAGAGTAAAGAATGACACAGCATCTTCTAAGAAACATCATACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCACAGAGTAAAGAATGACACAGCATCTTCTAAGAAACATCATACA  50

seq1  ATAAGCCAACCCCAAAGACAATTTTAATTATATGGTTAGACTTTTGTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCCAACCCCAAAGACAATTTTAATTATATGGTTAGACTTTTGTTTC  100

seq1  ATTGGAAAATTGGAAACTTTATTTCAGCTTCCCAAAGATGAGCTATAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAAAATTGGAAACTTTATTTCAGCTTCCCAAAGATGAGCTATAGGA  150

seq1  GTTGAGGGGAAAGCTGAATCACAGTATTTATTGCAATTGTGACCACCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGGGGAAAGCTGAATCACAGTATTTATTGCAATTGTGACCACCAGA  200

seq1  ACAAAAACCCTCCCTACTTTTACTTGCAATCTTTATATATTTTCTCTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACCCTCCCTACTTTTACTTGCAATCTTTATATATTTTCTCTCCA  250

seq1  AAGAAGTTAAAATAATATCTATACAACAAGAAAAAAAGTTTCAAAGAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTTAAAATAATATCTATACAACAAGAAAAAAAGTTTCAAAGAAGG  300

seq1  TTGAAAAATAACTGTACAACAACAAAAATAGCTGTAGAAAAAGTTATCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAATAACTGTACAACAACAAAAATAGCTGTAGAAAAAGTTATCTG  350

seq1  TGATAGTTCAAAGGCTTGAGAGAAAAATCAATAAAGAAGATAAAACAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGTTCAAAGGCTTGAGAGAAAAATCAATAAAGAAGATAAAACAAGA  400

seq1  AATTCCTAATTTCAACTCTATGGTATATAATAAAATTGAGGATCAAGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTAATTTCAACTCTATGGTATATAATAAAATTGAGGATCAAGATA  450

seq1  GACAGCCCACTGAATTTATATTGCCATCTGTTAATGAAATTAAGGTAATA  500
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GACAGCCCACTGAATTTATATTGCCATCTGTTAATGAAATTAA-GTAATA  499

seq1  ATATATATATATATATAAATGGGAACAAAACA-CCCATGG-AAGGAGTTA  548
      |||||||||||||||||||||||||||||||| ||||||| |||||||||
seq2  ATATATATATATATATAAATGGGAACAAAACACCCCATGGAAAGGAGTTA  549

seq1  CAGAGTCAAAATTT-GGAGCAGTGACGAAAAGAT-GGACCATCTAGTGAT  596
      |||||||||||||| ||||||||||||||||||| |||||||||||||||
seq2  CAGAGTCAAAATTTGGGAGCAGTGACGAAAAGATGGGACCATCTAGTGAT  599

seq1  TGCCATATCCAGGGATCCATCCCATAATCAGCTTCCAAATGCTGACACCA  646
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGCCATATCCAGGGATCCATCCCAT-ATCAGCTTCCAAATGCTGACACCA  648

seq1  TTGCAT-ACACTA-GGAAGATTTTGCTGAAAGGACCCAGATATAGCTGTC  694
      |||||| |||||| ||| ||||| ||||||  || |||||||||||||||
seq2  TTGCATAACACTAGGGAGGATTTGGCTGAA--GA-CCAGATATAGCTGTC  695

seq1  TCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACA  744
      |||||||||||||||||  ||||||||||||||   |||| |||||||||
seq2  TCTTGTGAGACTATGCC--GGCCTAGCAAACAC--GAGTGCATGCTCACA  741

seq1  GTCA-GCATCCCCAATGGAGGA  765
      |||| ||||||| | |||||||
seq2  GTCAGGCATCCCGATTGGAGGA  763