BAC Information

Click to search

BAC

Clone NameB6Ng01-242G15
Chromosome5 (Build37)
Map Location 32,321,338 - 32,322,478
singlet/doubletsinglet
Overlap geneBre
Upstream geneSlc5a6, 0610007C21Rik, Cad, Slc30a3, Dnajc5g, Trim54, Ucn, Mpv17, Gtf3c2, Eif2b4, Snx17, Zfp513, Ppm1g, ENSMUSG00000055424, Nrbp1, Krtcap3, Ift172, Fndc4, Gckr, Zfp512, 4930548H24Rik, Xab1, Supt7l, Slc4a1ap, Mrpl33, Rbks, LOC100040000
Downstream geneFosl2, LOC672217, Plb1, EG665350, LOC545743, Ppp1cb, LOC634553, LOC675983, Yes1, LOC100039775, Pisd, C330019G07Rik, LOC100040141, Depdc5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242G15.b
ACCGA052063
length1,147
definitionB6Ng01-242G15.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgacatgctctaacttaggatgtactaaaatagcttttagaag
agacttctagactaagaatgacctttggttaaaaatttgcctttgtcctc
tgatggaagggaagtaatggggatgtcaaaacacagttcatgtcacatgt
gacaaatacagcttgatttcacctccatgagttgtcaaattcatagacat
agaaaatcagacaggttgctaggatctgggccatcaggaagctttgttta
taataggggttaaagtgatgaaaaacgttctggagatgaatggtgattat
ggttgtgctcctatgtaagcgcactccatgccactagcgaagatctgaat
ctcagtatactttaccataacttcaaaaagttgaaaagattaaaaaactc
agcttgaaatttaagtagcctttcttcagtaccagccaatgctttctcac
ccatttccattcagaggtcactggaataatagaacatggcctccggtata
ggtgatactagagttacaacatataaacactattgtttatcaagtgctca
ctatatacagagcactgtacagagtattttacacccataactcagtatca
ttttcttaacagcccgtgaggttgggtcactttcctttcctcactttcca
ggaagaggaaacggatgcaattcgcctgtcctctggcctacagttgaagg
aaatagcatgtaaaccaacacctgcttacagatcttctcttccctactcc
tcgctaaggcttcctttcttggcagtcataggaatagctggagtgcacag
tcagtggtctcactagccccactcatttttccagtatgccataagctaat
accatggtctaggcaagtgccatgatttcagagagattggcaatagcagt
acagctccactggctcttctggggcggttagagggtccccgctgggtgta
tgatcatgagaatctcagtcctgggcagaaatggtaagcaggaatcctaa
cttcttgttcttcctgaaagtgagtgcctttgtaattcttcaacattccc
tttggatacctcagcttatgaaagaaatttcctcatgctggtggtcttac
gaactttcctatatgtttaacacgtggaattaaggcctctctggtct
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_32321338_32322478
seq2: B6Ng01-242G15.b_42_1188

seq1  GAATTCTTGACATGCTCTAACTTAGGATGTACTAAAAGAGCTTTTAGAAG  50
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GAATTCTTGACATGCTCTAACTTAGGATGTACTAAAATAGCTTTTAGAAG  50

seq1  AGACTTCTAGACTAAGAATGACCTTTGGTTAAAAATTTGCCTTTGTCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTCTAGACTAAGAATGACCTTTGGTTAAAAATTTGCCTTTGTCCTC  100

seq1  TGATGGAAGGGAAGTAATGGGGATGTCAAAACACAGTTCATGTCACATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGAAGGGAAGTAATGGGGATGTCAAAACACAGTTCATGTCACATGT  150

seq1  GACAAATACAGCTTGATTTCACCTCCATGAGTTGTCAAATTCATAGACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATACAGCTTGATTTCACCTCCATGAGTTGTCAAATTCATAGACAT  200

seq1  AGAAAATCAGACAGGTTGCTAGGATCTGGGCCATCAGGAAGCTTTGTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATCAGACAGGTTGCTAGGATCTGGGCCATCAGGAAGCTTTGTTTA  250

seq1  TAATAGGGGTTAAAGTGATGAAAAACGTTCTGGAGATGAATGGTGATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGGGGTTAAAGTGATGAAAAACGTTCTGGAGATGAATGGTGATTAT  300

seq1  GGTTGTGCTCCTATGTAAGCGCACTCCATGCCACTAGCGAAGATCTGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTGCTCCTATGTAAGCGCACTCCATGCCACTAGCGAAGATCTGAAT  350

seq1  CTCAGTATACTTTACCATAACTTCAAAAAGTTGAAAAGATTAAAAAACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTATACTTTACCATAACTTCAAAAAGTTGAAAAGATTAAAAAACTC  400

seq1  AGCTTGAAATTTAAGTAGCCTTTCTTCAGTACCAGCCAATGCTTTCTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGAAATTTAAGTAGCCTTTCTTCAGTACCAGCCAATGCTTTCTCAC  450

seq1  CCATTTCCATTCAGAGGTCACTGGAATAATAGAACATGGCCTCCGGTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCCATTCAGAGGTCACTGGAATAATAGAACATGGCCTCCGGTATA  500

seq1  GGTGATACTAGAGTTACAACATATAAACACTATTGTTTATCAAGTGCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATACTAGAGTTACAACATATAAACACTATTGTTTATCAAGTGCTCA  550

seq1  CTATATACAGAGCACTGTACAGAGTATTTTACACCCATAACTCAGTATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATACAGAGCACTGTACAGAGTATTTTACACCCATAACTCAGTATCA  600

seq1  TTTTCTTAACAGCCCGTGAGGTTGGGTCACTTTCCTTTCCTCACTTTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTAACAGCCCGTGAGGTTGGGTCACTTTCCTTTCCTCACTTTCCA  650

seq1  GGAAGAGGAAACGGATGCAATTCGCCTGTCCTCTGGCCTACAGTTGAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGGAAACGGATGCAATTCGCCTGTCCTCTGGCCTACAGTTGAAGG  700

seq1  AAATAGCATGTAAACCAACACCTGCTTACAGATCTTCTCTTCCCTACTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCATGTAAACCAACACCTGCTTACAGATCTTCTCTTCCCTACTCC  750

seq1  TCGCTAAGGCTTCCTTTCTTGGCAGTCATAGGAATAGCTGGAGTGCACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTAAGGCTTCCTTTCTTGGCAGTCATAGGAATAGCTGGAGTGCACAG  800

seq1  TCAGTGGTCTCACTAGCCCCACTCATTTTTCCAGTATGCCATAAGCTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGTCTCACTAGCCCCACTCATTTTTCCAGTATGCCATAAGCTAAT  850

seq1  ACCATGGTCTAGGCAAGTGCCATGATTTCAGAGAGATTGGCAATAGCAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGTCTAGGCAAGTGCCATGATTTCAGAGAGATTGGCAATAGCAGT  900

seq1  ACAGCTCCACTGGCTCTTCTGGGGCGGTTAGAGGGCCCCCGCTGGGTGTA  950
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACAGCTCCACTGGCTCTTCTGGGGCGGTTAGAGGGTCCCCGCTGGGTGTA  950

seq1  TGATCATGAGAATCTCAGT-CTGGGCAGAAATGGTAGGCAGGGATCCTAA  999
      ||||||||||||||||||| |||||||||||||||| ||||| |||||||
seq2  TGATCATGAGAATCTCAGTCCTGGGCAGAAATGGTAAGCAGGAATCCTAA  1000

seq1  CTTCTTGTTTCTTCCTGAAAGTGAGGTGCTTTGTAATTCTTCAACATTCC  1049
      ||||||| |||||||||||||||||   ||||||||||||||||||||||
seq2  CTTCTTG-TTCTTCCTGAAAGTGAGTGCCTTTGTAATTCTTCAACATTCC  1049

seq1  CTTT-GATACCTCAGC-TATGAGAG-AATTCCTTCATGCTGTGGGTCTTT  1096
      |||| ||||||||||| ||||| || |||| | ||||||||  |||||| 
seq2  CTTTGGATACCTCAGCTTATGAAAGAAATTTCCTCATGCTGGTGGTCTTA  1099

seq1  TGAACTTTCCTA-ATGTTGAAAAGGTGG-ATTAAGGCCT-TCTGGTCT  1141
       ||||||||||| ||||| || | |||| |||||||||| ||||||||
seq2  CGAACTTTCCTATATGTTTAACACGTGGAATTAAGGCCTCTCTGGTCT  1147