BAC Information

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BAC

Clone NameB6Ng01-243P07
Chromosome5 (Build37)
Map Location 39,928,515 - 39,929,670
singlet/doubletsinglet
Overlap genenone
Upstream geneWdr1, 4930421P07Rik, 6820424L24Rik, Clnk, LOC384174
Downstream geneHs3st1, EG665839, LOC100040502
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243P07.g
ACCGA053208
length1,136
definitionB6Ng01-243P07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcttttaagctatctggaagaaataatagtttcagtgttctca
tcttgatatatgttttctattcgggtcattcgagtgttagtttagatttc
tcaatatatgttgaggttttcacacaactcgcctaacacatttcttgttg
gaaatatatccaaataatttagtcttaagttgtaattaaaaggatatttc
ctaaataaaaaaaagtatctactttcttcactatgtaaatatatagtctg
ttcagtttaccaaactctcattgtttgttttggttgatatctccatgttc
ccatggtcaccattgagtaccaggcaaattatctccaaactaagtggatt
tagggaacaatatcttagagtgtgtgtggatcaagaatcaaaccccgctt
agctagtatctacattcagaacctcagcagctataatcgggctgtcattc
aggggagcatctttaaagatgagtcgtctttaagctcagcaggatgagcc
tcttccaagctcacccatgtggctttgggctagatttttcttccttatgc
tccgatggactgaaaaccttggctctttgctctcgaatgaataggagcca
tactttgcttcttgccgcacacattagctagtgggaggttgattcatgat
gatgaggggaaagagtacatacatgcaagacacatgaggagacggacaga
tcatgtgacaataaaatcatatacactctgactctagtattgacatcccg
tcttccttgccacgggctgtagattggaagtgagtccctttgactttcat
tggtaaagtgcttgctatacaactatgaagacaaattttaaatcccagaa
gtgacaaaaattcaagtgtagtaacatgcacctgtaatccaaatgcgggg
aaaatagagagaggcagacccctagaactcactggctgctcagtataggg
acattcatttagatctcattcagtgagagaccttgctcataaaataagtg
agaaaaacttggggacgcaatcacactgactacatctcaacaaccattga
ctgcacttgataaccaatgtgcaccatatgaagggcaacaaaatgccata
taccacatagagagtgtatctctgcggcaagggctt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_39928515_39929670
seq2: B6Ng01-243P07.g_68_1203 (reverse)

seq1  AAGCCC-TGCCGCAGAGATTCACTTCTCTATGTGTGGTGTATATGGGCTA  49
      |||||| |||||||||||| ||| ||||||||||    |||||| |||  
seq2  AAGCCCTTGCCGCAGAGATACAC-TCTCTATGTG----GTATAT-GGCAT  44

seq1  TTTGTGTGCACCTTCATATGTGTTTGCACATGTGTATCCAGGTGCAAGTC  99
      ||||| ||| ||||||||||    |||||||  ||   || |||| ||||
seq2  TTTGT-TGC-CCTTCATATG---GTGCACATTGGTTATCAAGTGC-AGTC  88

seq1  CAAATGTGTGTTGAGATGTAAGGTCAGTGTTGAATGCCTTCCCCAGTTTT  149
        ||||  ||||||||||||  ||||||| ||| ||| | ||| ||||||
seq2  --AATGGTTGTTGAGATGTA--GTCAGTG-TGATTGCGTCCCCAAGTTTT  133

seq1  TCTCCACTTTATTTTATGAAGCAAGGTCTCTCACTGAATGGAGATCT-AA  198
      ||| ||| |||||||||| |||||||||||||||||||| ||||||| ||
seq2  TCT-CAC-TTATTTTATG-AGCAAGGTCTCTCACTGAAT-GAGATCTAAA  179

seq1  TGAATGTCCCTATACTGAGCAGCCAGTGAGTTCTAGGGGTCTGCCTCTCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTCCCTATACTGAGCAGCCAGTGAGTTCTAGGGGTCTGCCTCTCT  229

seq1  CTATTTTCCCCGCATTTGGATTACAGGTGCATGTTACTACACTTGAATTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTCCCCGCATTTGGATTACAGGTGCATGTTACTACACTTGAATTT  279

seq1  TTGTCACTTCTGGGATTTAAAATTTGTCTTCATAGTTGTATAGCAAGCAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACTTCTGGGATTTAAAATTTGTCTTCATAGTTGTATAGCAAGCAC  329

seq1  TTTACCAATGAAAGTCAAAGGGACTCACTTCCAATCTACAGCCCGTGGCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCAATGAAAGTCAAAGGGACTCACTTCCAATCTACAGCCCGTGGCA  379

seq1  AGGAAGACGGGATGTCAATACTAGAGTCAGAGTGTATATGATTTTATTGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGACGGGATGTCAATACTAGAGTCAGAGTGTATATGATTTTATTGT  429

seq1  CACATGATCTCTTTGTCTCCTCATGTGTCTTGCATGTATGTACTCTTTCC  498
      |||||||||| |  ||||||||||||||||||||||||||||||||||||
seq2  CACATGATCTGTCCGTCTCCTCATGTGTCTTGCATGTATGTACTCTTTCC  479

seq1  CCTCATCCTCATGAATCAAACTCCCAGTAGCTACTGTGTGTGGCAAGAAG  548
      ||||||| ||||||||||| |||||| |||||| |||||| |||||||||
seq2  CCTCATCATCATGAATCAACCTCCCACTAGCTAATGTGTGCGGCAAGAAG  529

seq1  CAAAGTATGGCTCCTATTCATTAGAGAGCAAAGAGCCAAGGTTTTCAGTC  598
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CAAAGTATGGCTCCTATTCATTCGAGAGCAAAGAGCCAAGGTTTTCAGTC  579

seq1  CATCGGAGCATAAGGAAGAAAAATCTAGCCCAAAGCCACATGGGTGAGCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGGAGCATAAGGAAGAAAAATCTAGCCCAAAGCCACATGGGTGAGCT  629

seq1  TGGAAGAGGCTCATCCTGCTGAGCTTAAAGACGACTCATCTTTAAAGATG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAGGCTCATCCTGCTGAGCTTAAAGACGACTCATCTTTAAAGATG  679

seq1  CTCCCCTGAATGACAGCCCGATTATAGCTGCTGAGGTTCTGAATGTAGAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTGAATGACAGCCCGATTATAGCTGCTGAGGTTCTGAATGTAGAT  729

seq1  ACTAGCTAAGCTGCGTTTGATTCTTGATCCACACACACTCTAAGATATTG  798
      ||||||||||| | ||||||||||||||||||||||||||||||||||||
seq2  ACTAGCTAAGCGGGGTTTGATTCTTGATCCACACACACTCTAAGATATTG  779

seq1  TTCCCTAAATCCACTTAGTTTGGAGATAATTTGCCTTGTACTCAATGGTG  848
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTCCCTAAATCCACTTAGTTTGGAGATAATTTGCCTGGTACTCAATGGTG  829

seq1  ACCATGGGAACATGGAGATATCAACCAAAACAAACAATGAGAGTTTGGTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGGAACATGGAGATATCAACCAAAACAAACAATGAGAGTTTGGTA  879

seq1  AACTGAACAGACTATATATTTACATAGTGAAGAAAGTAGATACTTTTTTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAACAGACTATATATTTACATAGTGAAGAAAGTAGATACTTTTTTT  929

seq1  TATTTAGGAAATATCCTTTTAATTACAACTTAAGACTAAATTATTTGGAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGGAAATATCCTTTTAATTACAACTTAAGACTAAATTATTTGGAT  979

seq1  ATATTTCCAACAAGAAATGTGTTAGGCGAGTTGTGTGAAAACCTCAACAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCCAACAAGAAATGTGTTAGGCGAGTTGTGTGAAAACCTCAACAT  1029

seq1  ATATTGAGAAATCTAAACTAACACTTGAATGACCAGAATAGAAAACATAT  1098
      ||||||||||||||||||||||||| |||||||| |||||||||||||||
seq2  ATATTGAGAAATCTAAACTAACACTCGAATGACCCGAATAGAAAACATAT  1079

seq1  ATCAAGATGAGAACACTGAAACTATTATTTCTTTTTAGATAGCTTAAAAG  1148
      ||||||||||||||||||||||||||||||| ||  ||||||||||||||
seq2  ATCAAGATGAGAACACTGAAACTATTATTTC-TTCCAGATAGCTTAAAAG  1128

seq1  AAGAATTC  1156
      ||||||||
seq2  AAGAATTC  1136