BAC Information

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BAC

Clone NameB6Ng01-245O13
Chromosome5 (Build37)
Map Location 99,218,433 - 99,368,900
singlet/doubletdoublet
Overlap gene1700007G11Rik, Bmp3, Prkg2
Upstream geneAntxr2, EG435856, LOC666315, LOC666320, LOC666326, Prdm8, Fgf5
Downstream geneLOC100041680, Rasgef1b, A930011G23Rik, LOC100040738, LOC666364, LOC100040763, LOC100040774
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245O13.bB6Ng01-245O13.g
ACCGA054669GA054670
length7751,064
definitionB6Ng01-245O13.b B6Ng01-245O13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,368,128 - 99,368,900)(99,218,433 - 99,219,497)
sequence
gaattcatgatctcccttgcaacaaagccatgtgctcaccattgtgaaag
caagcttccccagagggtaaattagaaagaaacagagggagggagagaga
cagcagagagggagacacaacacagactcatttggaacttcatatacatt
aaagtgtttgtaagactttattctttgtcgttctctgggctgccttcaat
taaaggtcgataaacactgcctaaaaatccagtttatcttctccttgcac
cccatacttgtgacctgcttctattcccattataaaatggcgtataagca
ccattcatattgaccagtgtccctctagttaaagtgattctgattttatt
gcccaccctccatgctgtcattaaggagttgccatgctttgctgtggggt
ggttggaaaacagaagtgaccttaagtgccgagaagctccggccttatcc
tcttcctctcccctacctgaggctcgcccaaacgcactgggcagagtgtg
gtgggatgcgcaagcaaactgatgtgacttggcctttccttccagtgagg
tggattggtccattccctgtcataaggaggcttccttctgccacacacgg
cttcaggggcagagtgcgggggacagctggcacagtacagcagatggcat
ggcgttctcggaactgagagacagaattttcatgctgatttttcctcttg
tctcagagctttttcctaagctaccaagctaagggagaagctcagtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtg
gaattcagccccaagaggtcatgacaaggttccagcgcagaggactcatg
aggaccctgctctgccctagatagaagacggagaaatacaccaaggcctg
tgcagaaacaacaggatgaaatttctgtctcagggtggatagagagtagg
gaggaaatcccagcaagtcaggcaggcgctagtacacacggagagcaaag
agggtctgagaaggggttccgttccgggcatcagttttccaactaacccg
atcttcagggaaacaatgcaacctagagaatgtgtatttacctaagcaag
ttttcagaaattcttactttgtccagtcctctgccaagaatcatgcgcat
gcgctagagcagaagctggctattgctgctcaccaagtgacaggcaacaa
aacaagctgagcaagcatcatatgcacgaattctgaggcgcgtggattct
gttcaatgctgggcactaagcacggtgtgacgtggctacccttcaaggac
ttttccaagtccagcagtccggaaggcaaaggagatataacctgtgtgtt
gatttaggcggatgcatatctcgtcttattaattgcatcagggcctggca
ctcctttgaagacgggtcacaactgtgcatccatagcaaggagctgctct
ccacatcagtgtcttactagttgctgcgtcacttacttactgggtgtgat
aaaggaatcacattcattcccatatgacagattttaagtcagcattctgg
atattacgtgttttaattcacagtttaactcttaaaaactacacaaaaag
acgattaaagatgctctcccgtgtttccaagaatcctgggaaaaccctcg
cagggacaatccccatgacacctctggatggtaaatcactacagtttttc
cttattgtttgggccattatagaaaaaggagaaagggttgccggatgtca
cctgttggagctcttcttgctgcccaggaacctctgtatgaagcatatct
gccccaagatcacatgaaacaaaacttacaattcataggtatagactgta
aagcaggactgtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_99368128_99368900
seq2: B6Ng01-245O13.b_51_825 (reverse)

seq1  CACACACACACACACACACACACACACACACTGAGCTTCTCCCTTAGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACTGAGCTTCTCCCTTAGCTT  50

seq1  GGTAGCTTAGGAAAAAGCTCTGAGACAAGAGG-AAAATCAGCATG-AAAT  98
      |||||||||||||||||||||||||||||||| |||||||||||| ||||
seq2  GGTAGCTTAGGAAAAAGCTCTGAGACAAGAGGAAAAATCAGCATGAAAAT  100

seq1  TCTGTCTCTCAGTTCCGAGAACGCCATGCCATCTGCTGTACTGTGCCAGC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCTCAGTTCCGAGAACGCCATGCCATCTGCTGTACTGTGCCAGC  150

seq1  TGTCCCCCGCACTCTGCCCCTGAAGCCGTGTGTGGCAGAAGGAAGCCTCC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCCGCACTCTGCCCCTGAAGCCGTGTGTGGCAGAAGGAAGCCTCC  200

seq1  TTATGACAGGGAATGGACCAATCCACCTCACTGGAAGGAAAGGCCAAGTC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGACAGGGAATGGACCAATCCACCTCACTGGAAGGAAAGGCCAAGTC  250

seq1  ACATCAGTTTGCTTGCGCATCCCACCACACTCTGCCCAGTGCGTTTGGGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAGTTTGCTTGCGCATCCCACCACACTCTGCCCAGTGCGTTTGGGC  300

seq1  GAGCCTCAGGTAGGGGAGAGGAAGAGGATAAGGCCGGAGCTTCTCGGCAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTCAGGTAGGGGAGAGGAAGAGGATAAGGCCGGAGCTTCTCGGCAC  350

seq1  TTAAGGTCACTTCTGTTTTCCAACCACCCCACAGCAAAGCATGGCAACTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGTCACTTCTGTTTTCCAACCACCCCACAGCAAAGCATGGCAACTC  400

seq1  CTTAATGACAGCATGGAGGGTGGGCAATAAAATCAGAATCACTTTAACTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATGACAGCATGGAGGGTGGGCAATAAAATCAGAATCACTTTAACTA  450

seq1  GAGGGACACTGGTCAATATGAATGGTGCTTATACGCCATTTTATAATGGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGACACTGGTCAATATGAATGGTGCTTATACGCCATTTTATAATGGG  500

seq1  AATAGAAGCAGGTCACAAGTATGGGGTGCAAGGAGAAGATAAACTGGATT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAAGCAGGTCACAAGTATGGGGTGCAAGGAGAAGATAAACTGGATT  550

seq1  TTTAGGCAGTGTTTATCGACCTTTAATTGAAGGCAGCCCAGAGAACGACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGCAGTGTTTATCGACCTTTAATTGAAGGCAGCCCAGAGAACGACA  600

seq1  AAGAATAAAGTCTTACAAACACTTTAATGTATATGAAGTTCCAAATGAGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAAAGTCTTACAAACACTTTAATGTATATGAAGTTCCAAATGAGT  650

seq1  CTGTGTTGTGTCTCCCTCTCTGCTGTCTCTCTCCCTCCCTCTGTTTCTTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTGTGTCTCCCTCTCTGCTGTCTCTCTCCCTCCCTCTGTTTCTTT  700

seq1  CTAATTTACCCTCTGGGGAAGCTTGCTTTCACAATGGTGAGCACATGGCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTACCCTCTGGGGAAGCTTGCTTTCACAATGGTGAGCACATGGCT  750

seq1  TTGTTGCAAGGGAGATCATGAATTC  773
      |||||||||||||||||||||||||
seq2  TTGTTGCAAGGGAGATCATGAATTC  775

seq1: chr5_99218433_99219497
seq2: B6Ng01-245O13.g_69_1132

seq1  GAATTCAGCCCCAAGAGGTCATGACAAGGTTCCAGCGCAGAGGACTCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCCCAAGAGGTCATGACAAGGTTCCAGCGCAGAGGACTCATG  50

seq1  AGGACCCTGCTCTGCCCTAGATAGAAGACGGAGAAATACACCAAGGCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCCTGCTCTGCCCTAGATAGAAGACGGAGAAATACACCAAGGCCTG  100

seq1  TGCAGAAACAACAGGATGAAATTTCTGTCTCAGGGTGGATAGAGAGTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAACAACAGGATGAAATTTCTGTCTCAGGGTGGATAGAGAGTAGG  150

seq1  GAGGAAATCCCAGCAAGTCAGGCAGGCGCTAGTACACACGGAGAGCAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAATCCCAGCAAGTCAGGCAGGCGCTAGTACACACGGAGAGCAAAG  200

seq1  AGGGTCTGAGAAGGGGTTCCGTTCCGGGCATCAGTTTTCCAACTAACCCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTGAGAAGGGGTTCCGTTCCGGGCATCAGTTTTCCAACTAACCCG  250

seq1  ATCTTCAGGGAAACAATGCAACCTAGAGAATGTGTATTTACCTAAGCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCAGGGAAACAATGCAACCTAGAGAATGTGTATTTACCTAAGCAAG  300

seq1  TTTTCAGAAATTCTTACTTTGTCCAGTCCTCTGCCAAGAATCATGCGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGAAATTCTTACTTTGTCCAGTCCTCTGCCAAGAATCATGCGCAT  350

seq1  GCGCTAGAGCAGAAGCTGGCTATTGCTGCTCACCAAGTGACAGGCAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTAGAGCAGAAGCTGGCTATTGCTGCTCACCAAGTGACAGGCAACAA  400

seq1  AACAAGCTGAGCAAGCATCATATGCACGAATTCTGAGGCGCGTGGATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCTGAGCAAGCATCATATGCACGAATTCTGAGGCGCGTGGATTCT  450

seq1  GTTCAATGCTGGGCACTAAGCACGGTGTGACGTGGCTACCCTTCAAGGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAATGCTGGGCACTAAGCACGGTGTGACGTGGCTACCCTTCAAGGAC  500

seq1  TTTTCCAAGTCCAGCAGTCCGGAAGGCAAAGGAGATATAACCTGTGTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAAGTCCAGCAGTCCGGAAGGCAAAGGAGATATAACCTGTGTGTT  550

seq1  GATTTAGGCGGATGCATATCTCGTCTTATTAATTGCATCAGGGCCTGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAGGCGGATGCATATCTCGTCTTATTAATTGCATCAGGGCCTGGCA  600

seq1  CTCCTTTGAAGACGGGTCACAACTGTGCATCCATAGCAAGGAGCTGCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTGAAGACGGGTCACAACTGTGCATCCATAGCAAGGAGCTGCTCT  650

seq1  CCACATCAGTGTCTTACTAGTTGCTGCGTCACTTACTTACTGGGTGTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATCAGTGTCTTACTAGTTGCTGCGTCACTTACTTACTGGGTGTGAT  700

seq1  AAAGGAATCACATTCATTCCCATATGACAGATTTTAAGTCAGCATTCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAATCACATTCATTCCCATATGACAGATTTTAAGTCAGCATTCTGG  750

seq1  ATATTACGTGTTTTAATTCACAGTTTAACTCTT-AAAACTACACAAAAAG  799
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATATTACGTGTTTTAATTCACAGTTTAACTCTTAAAAACTACACAAAAAG  800

seq1  ACGATTAAAGATGCTCT-CCGTG-TTCCAAGAATCCT-GGAAAACCCTCG  846
      ||||||||||||||||| ||||| ||||||||||||| ||||||||||||
seq2  ACGATTAAAGATGCTCTCCCGTGTTTCCAAGAATCCTGGGAAAACCCTCG  850

seq1  CAGGGACAATCCCCATGACACCTCTGGATGGTAAATCACTACAGTTTTTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGACAATCCCCATGACACCTCTGGATGGTAAATCACTACAGTTTTTC  900

seq1  CTTATTTGTTTGGGCCATTATAGAAAAAAGGAGAAAGGGTTGCCGGATGT  946
      |||| |||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTTA-TTGTTTGGGCCATTATAG-AAAAAGGAGAAAGGGTTGCCGGATGT  948

seq1  CACCTGTTGGAGCTCTTCTTGCTGCCCCAGGAACCTCTGTATGAAGCATA  996
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CACCTGTTGGAGCTCTTCTTGCTG-CCCAGGAACCTCTGTATGAAGCATA  997

seq1  TCTGCCCCAAGGATCACATGAAACAAAACCTACAAATCATAGGGTATAGA  1046
      |||||||||| |||||||||||||||||| ||||| ||||| ||||||||
seq2  TCTGCCCCAA-GATCACATGAAACAAAACTTACAATTCATA-GGTATAGA  1045

seq1  CTGTAAAGCAGGACTGTTA  1065
      |||||||||||||||||||
seq2  CTGTAAAGCAGGACTGTTA  1064