BAC Information

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BAC

Clone NameB6Ng01-246D13
Chromosome5 (Build37)
Map Location 9,166,626 - 9,167,607
singlet/doubletsinglet
Overlap genenone
Upstream geneAdam22, Dbf4, Slc25a40, Gm440, Abcb1a, EG330031, Abcb1b, Abcb4, Crot, 4930420K17Rik, Dmtf1
Downstream geneLOC654361, 9330182L06Rik, Grm3, LOC100042768, LOC625446, LOC435832
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246D13.bB6Ng01-246D13.g
ACCGA054897GA054898
length1,1571,124
definitionB6Ng01-246D13.b B6Ng01-246D13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagagaactgcttacctttgtaagcacagacaataaacttatctg
ggtggcatcccatccagagattaccattctgaccctgcctggacctaaat
tcactgagcccctgaccgaccttgaactcaggaatccgcccacctttgta
tctgccggctctttttaactttctgaagagctggcacgtagtgcagctgc
ctcggttctttaaggtccatgaagcccttcctatgattcatattgcatcc
ttatattttgcacagtcgataaattatatatttttgaactcatgttttca
gagttcattcccatagcctgaaggactgtcctgaaggtcacatgtttact
tttttttttttggctaaggacatagacctaccctcacctctcagactcgt
gctgtttctgattattatggagtcattaaccttggtagagaggacattcc
cctttaatcatgtcagggaaaatttttcccaataactttggctgggagac
tatttcctgaaggagaaacatgaactaatatatctacatatttttataca
aacaagcctcgtgcccaacaatcctcaacactcatggagacccacaccct
cctggatctgctccagggtcgagaaaacatgtcacactgtctcttccatg
caggaccgtgcaggactcaacatcacctgatattgggaagacaaattcta
gtttttaccaactgccttggattggagttttgactaaggaagcataacaa
aacatgataagtcataataatgatatttaaaatgtaaatctagcattaca
gtaatacctctagacttttaacctgaataattattataaagattttctag
aatgtgatttgaattccagaatacctgtctgtagttacacctacttttct
tcttagtcagagtgcagtgagattatgcataagattttaaatatacttga
atttaagtagggttttaggtgttcttatagaaaaataaagatgagaaatt
attgccgtccaagcagaaattatggcataaaacatttacagcttactaaa
tggctttgcttctgtgtgatttccttgtgtccctgtgttgggaataagat
tcatgaaacgtcatgtgattcagtgctgaatggcgttctcccttactgtt
ttccttc
gaattctcacctgaggaaatccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggattcagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccaaat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggttggacctggagggcatcattctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagacacaatttgctaaacacatgaaactcaag
aagaacgaagactgaattgtggacactatgcccctccttagaattgggaa
taaaacacccatggaaggagttacagagacaaagtttggagctgagacga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctattggatgggtcacagggccccca
atggaggagctagagaaagtacctcatgagctaaaggatcttgcaaccct
atagtggaacaacattatgactaacagtaccccgagctcttgactctagc
ttgcatatgttaatcaaaagaatgggcttagctggccatcattggaagag
agagccaatggaccacgcaaaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_9166626_9167607
seq2: B6Ng01-246D13.b_225_1205

seq1  AGAGCTGGCACGTAGTGCAGCTGCCTCGGTTCTTTAAGGTCCATGAAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGGCACGTAGTGCAGCTGCCTCGGTTCTTTAAGGTCCATGAAGCC  50

seq1  CTTCCTATGATTCATATTGCATCCTTATATTTTGCACAGTCGATAAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTATGATTCATATTGCATCCTTATATTTTGCACAGTCGATAAATTA  100

seq1  TATATTTTTGAACTCATGTTTTCAGAGTTCATTCCCATAGCCTGAAGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTTGAACTCATGTTTTCAGAGTTCATTCCCATAGCCTGAAGGAC  150

seq1  TGTCCTGAAGGTCACATGTTTACTTTTTTTTTTTTGGCTAAGGACATAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGAAGGTCACATGTTTACTTTTTTTTTTTTGGCTAAGGACATAGA  200

seq1  CCTACCCTCACCTCTCAGACTCGTGCTGTTTCTGATTATTATGGAGTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCCTCACCTCTCAGACTCGTGCTGTTTCTGATTATTATGGAGTCAT  250

seq1  TAACCTTGGTAGAGAGGACATTCCCCTTTAATCATGTCAGGGAAAATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTGGTAGAGAGGACATTCCCCTTTAATCATGTCAGGGAAAATTTT  300

seq1  TCCCAATAACTTTGGCTGGGAGACTATTTCCTGAAGGAGAAACATGAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATAACTTTGGCTGGGAGACTATTTCCTGAAGGAGAAACATGAACT  350

seq1  AATATATCTACATATTTTTATACAAACAAGCCTCGTGCCCAACAATCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATCTACATATTTTTATACAAACAAGCCTCGTGCCCAACAATCCTC  400

seq1  AACACTCATGGAGACCCACACCCTCCTGGATCTGCTCCAGGGTCGAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTCATGGAGACCCACACCCTCCTGGATCTGCTCCAGGGTCGAGAAA  450

seq1  ACATGTCACACTGTCTCTTCCATGCAGGACCGTGCAGGACTCAACATCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTCACACTGTCTCTTCCATGCAGGACCGTGCAGGACTCAACATCAC  500

seq1  CTGATATTGGGAAGACAAATTCTAGTTTTTACCAACTGCCTTGGATTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTGATATTGGGAAGACAAATTCTAGTTTTTACCAACTGCCTTGGATT-GG  549

seq1  AGTTTTGACTAAGGAAGCATAACAAAACATGATAAGTCATAATAATGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGACTAAGGAAGCATAACAAAACATGATAAGTCATAATAATGATA  599

seq1  TTTAAAATGTAAATCTAGCATTACAGTAATACCTCTAGACTTTTAACCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATGTAAATCTAGCATTACAGTAATACCTCTAGACTTTTAACCTG  649

seq1  AATAATTATTATAAAGATTTTCTAGAATGTGATTTGAATTCCAGAATACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTATTATAAAGATTTTCTAGAATGTGATTTGAATTCCAGAATACC  699

seq1  TGTCTGTAGTTACACCTACTTTTCTTCTTAGTCAGAGTGCAGTGAGATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTAGTTACACCTACTTTTCTTCTTAGTCAGAGTGCAGTGAGATTA  749

seq1  TGCATAAGATTTTAAATATACTTGAATTTAAGTAGGG-TTTAGGTG-TCT  798
      ||||||||||||||||||||||||||||||||||||| |||||||| |||
seq2  TGCATAAGATTTTAAATATACTTGAATTTAAGTAGGGTTTTAGGTGTTCT  799

seq1  TATAGAAAAAATAAAGATGAGAAA-TATTGCCGTCCCAAGCAGAAATTAT  847
      ||||| |||||||||||||||||| ||||||||| |||||||||||||||
seq2  TATAG-AAAAATAAAGATGAGAAATTATTGCCGT-CCAAGCAGAAATTAT  847

seq1  GGCATAAAAACATTTACAGCTTACT-AATGGCTTTTGCTCTGTGTGATTT  896
      ||||| ||||||||||||||||||| |||||||||   ||||||||||||
seq2  GGCAT-AAAACATTTACAGCTTACTAAATGGCTTTGCTTCTGTGTGATTT  896

seq1  CCTGTGT-TCCCTGTGTTGG--ATAAGATTCATG-AACGTCATTGTGGAT  942
      ||| ||| ||||||||||||  |||||||||||| ||||||| ||| |||
seq2  CCT-TGTGTCCCTGTGTTGGGAATAAGATTCATGAAACGTCA-TGT-GAT  943

seq1  TCAGTGCTG-ATGGCGTTTCCTCCCTTACTGTTTTCTCTTC  982
      ||||||||| ||||||||  |||||||||||||||| ||||
seq2  TCAGTGCTGAATGGCGTT--CTCCCTTACTGTTTTC-CTTC  981