MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-246E09
Chromosome	5 (Build37)
Map Location	54,228,886 - 54,412,454
singlet/doublet	doublet
Overlap gene	Tbc1d19, Stim2
Upstream gene	Anapc4, Slc34a2, 2310045A20Rik, 1810013D10Rik, LOC100041198, LOC100041911, Rbpj, Cckar
Downstream gene	EG666377, LOC666380
Link	Open Mouse BAC browser

Click to get alignment info.

name	Anapc4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52206 MGI:1098673
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc34a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20531 MGI:1342284
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310045A20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231238 MGI:1916941
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1810013D10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66278 MGI:1913528
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 107 ESTs

name	LOC100041198 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041198
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC100041911 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041911
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Rbpj (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19664 MGI:96522
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Cckar (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12425 MGI:99478
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tbc1d19 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67249 MGI:1914499
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stim2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:116873 MGI:2151156
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666377 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666377 MGI:3645115
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 157 ESTs

name	LOC666380 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666380
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Anapc4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892784 GeneID:52206 MGI:1098673
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : anaphase promoting complex subunit 4 transcript_id : NM_024213.2

name	Slc34a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:66793410 GeneID:20531 MGI:1342284
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 34 (sodium phosphate), member 2 transcript_id : NM_011402.2

name	2310045A20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129972 GeneID:231238 MGI:1916941
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310045A20 gene transcript_id : NM_172710.2

name	1810013D10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374764 GeneID:66278 MGI:1913528
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 107 ESTs product : RIKEN cDNA 1810013D10 gene transcript_id : XM_983179.1

name	LOC100041198 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253883 GeneID:100041198
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : hypothetical protein LOC100041198 transcript_id : XM_001475948.1

name	LOC100041911 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253922 GeneID:100041911
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041911 transcript_id : XM_001478001.1

name	Rbpj (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286784 GeneID:19664 MGI:96522
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : recombination signal binding protein for immunoglobulin kappa J region transcript_id : NM_001080928.1

name	Rbpj (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124301228 GeneID:19664 MGI:96522
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : recombination signal binding protein for immunoglobulin kappa J region transcript_id : NM_009035.4

name	Rbpj (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286786 GeneID:19664 MGI:96522
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : recombination signal binding protein for immunoglobulin kappa J region transcript_id : NM_001080927.1

name	Cckar (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753305 GeneID:12425 MGI:99478
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cholecystokinin A receptor transcript_id : NM_009827.1

name	Tbc1d19 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801409 GeneID:67249 MGI:1914499
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TBC1 domain family, member 19 transcript_id : NM_144517.3

name	Stim2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487384 GeneID:116873 MGI:2151156
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stromal interaction molecule 2 transcript_id : NM_001081103.1

name	EG666377 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374769 GeneID:666377 MGI:3645115
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 157 ESTs product : predicted gene, EG666377 transcript_id : XM_983460.1

name	Anapc4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956182 CCDS:CCDS19290.1 GeneID:52206 MGI:1098673
definition	GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : anaphase-promoting complex subunit 4 protein_id : NP_077175.1

name	Slc34a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66793411 CCDS:CCDS19291.1 GeneID:20531 MGI:1342284
definition	GO_component : GO:0016324 - apical plasma membrane [Evidence IDA]; GO:0005887 - integral to plasma membrane [Evidence IEA] GO_function : GO:0005386 - carrier activity [Evidence IEA]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : type IIb Na/Picotransporter product : solute carrier family 34 (sodium phosphate), member 2 protein_id : NP_035532.2

name	2310045A20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370028 GeneID:231238 MGI:1916941
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005529 - sugar binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC231238 protein_id : NP_766298.1

name	1810013D10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374765 GeneID:66278 MGI:1913528
definition	codon_start : 1 product : hypothetical protein LOC66278 protein_id : XP_988273.1

name	LOC100041198 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253884 GeneID:100041198
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475998.1

name	LOC100041911 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253923 GeneID:100041911
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478051.1

name	Rbpj (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124286785 GeneID:19664 MGI:96522
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0016563 - transcriptional activator activity [Evidence ISS] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0030183 - B cell differentiation [Evidence IMP]; GO:0042742 - defense response to bacterium [Evidence IMP]; GO:0001837 - epithelial to mesenchymal transition [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0030097 - hemopoiesis [Evidence IMP]; GO:0007219 - Notch signaling pathway [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IGI]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; RBP-J kappa; recombining binding protein suppressor of hairless product : recombining binding protein suppressor of hairless isoform 3 protein_id : NP_001074397.1

name	Rbpj (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94400775 CCDS:CCDS19292.1 GeneID:19664 MGI:96522
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0016563 - transcriptional activator activity [Evidence ISS] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0030183 - B cell differentiation [Evidence IMP]; GO:0042742 - defense response to bacterium [Evidence IMP]; GO:0001837 - epithelial to mesenchymal transition [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0030097 - hemopoiesis [Evidence IMP]; GO:0007219 - Notch signaling pathway [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IGI]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; RBP-J kappa; recombining binding protein suppressor of hairless product : recombining binding protein suppressor of hairless isoform 1 protein_id : NP_033061.3

name	Rbpj (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124286787 GeneID:19664 MGI:96522
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0016563 - transcriptional activator activity [Evidence ISS] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0030183 - B cell differentiation [Evidence IMP]; GO:0042742 - defense response to bacterium [Evidence IMP]; GO:0001837 - epithelial to mesenchymal transition [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0030097 - hemopoiesis [Evidence IMP]; GO:0007219 - Notch signaling pathway [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IGI]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; RBP-J kappa; recombining binding protein suppressor of hairless product : recombining binding protein suppressor of hairless isoform 2 protein_id : NP_001074396.1

name	Cckar (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753306 CCDS:CCDS19293.1 GeneID:12425 MGI:99478
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004951 - cholecystokinin receptor activity [Evidence IEA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007409 - axonogenesis [Evidence IMP]; GO:0030900 - forebrain development [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0001764 - neuron migration [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : cholecystokinin A receptor protein_id : NP_033957.1

name	Tbc1d19 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21362289 CCDS:CCDS19294.1 GeneID:67249 MGI:1914499
definition	codon_start : 1 product : TBC1 domain family, member 19 protein_id : NP_653100.1

name	Stim2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487385 GeneID:116873 MGI:2151156
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006816 - calcium ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0051924 - regulation of calcium ion transport [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : stromal interaction molecule 2 protein_id : NP_001074572.1

name	EG666377 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374770 GeneID:666377 MGI:3645115
definition	codon_start : 1 product : hypothetical protein protein_id : XP_988554.1

name	LOC666380 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666380
definition	number : 3 pseudo : _no_value

name	LOC666380 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666380
definition	number : 2 pseudo : _no_value

name	LOC666380 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666380
definition	number : 1 pseudo : _no_value

clone name	MSMg01-195J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291L17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-486M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457A03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-156P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482D21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-154J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445A07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-151B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118B12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-382G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211H03
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-246E09.b	B6Ng01-246E09.g
ACC	GA054931	GA054932
length	1,208	881
definition	B6Ng01-246E09.b	B6Ng01-246E09.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(54,411,267 - 54,412,454)	(54,228,886 - 54,229,766)
sequence	gaattccagagagattgaagttggggaaaacaagaggtgttggaggtgag agggtggaaattatgtaaatacagtgtactcctgtttgaaagtctcaaaa actaaaaataaacttaaagcccagaactccaaaagtacacatttgctcaa agcaatatcataaaagaaaaactgggggaaaaaattatccaataggactc tatccaataaaaatgaataagtaatttatatcttcaatttcatttaataa ttaaggaaaaactcaagatatgctagattttagaaagcaagatgcaaaag agcaactatgacaattcctatttcatattcattcattcagatcctatgac agaaatacctttgagttgcttcacaacagaaattactggtcacaattcta aaggccaaaatcctcaacacgtggggccacctatggtgagggcactcttt tgttacgtcctcccataacagaagagcaaaggggtctgattagccttcag aatcatcttctatagagtacctattccctgtaggggaggatgctgtgtcc tggtcccctcccagaggagcaaccctaaccctcccccgagaagctaaggt cccctctgtgtaagctggggacagggattcattcacaccataacacattt acataaaacaatacatgctgcacataaaaataatcctaaaatggttattc tggtaagagaaatttgttttactgtttgccatactttccatttctaagtt cagagaaagaaagactatctgattaaaaaatggaaattgaaacaacatat catttattttcaaaaccataagatatgttttaaatcagttaaaaacatgc atgggtaaaaaatattcttttgtactataactttcatggatactcagaga gaaaaaataaaatacagtaaaaagtttatgcacataatgtgtgaaaataa gatgtttattatccaaaaagttttcagaagaagtacagaaagaatagtaa gcacattctccaacactgcatgatcaaggaacggcttggtcccactcctt tccacagtctccatttcaacattggctgaggaacagaccacaccaacaca gatgccaattaaacttatattctgcttggaaaacattattaaagaattaa atccgagttctatgaatacctgaagctaaacaggattgaggacctggtcc tatgtgaa	gaattccctagaatgtattatttgtattccaagtactttgaaattctcaa acagaatctttgtaaggaactctgaaaatcttctttagtttgttgtttaa gttgtcaaatacagggtttttatttctgtgtttccggtgtctcagataat gcacaacaaataatcaatcactataattatgtggttcttctctgtagaaa cacaggaaagtgacattaatatctactggtcatttcatagattatctgaa attttgttttactttaactcattctagatttaagcctttttcgacccgtt tatgcacctaaggactttcttgaggtatgttctatcaggtatatatgcag atatgatgggtgtaattgaagagccatgcatgaccctgaatggcttttta acctgaggtgatacaagaattatgtttggcaagggaaagcatataaagaa actaaccaggcttgttgtttatttttaaaggtattaattaatctccgcaa cccaaattatgaaaatggtgattctcttagttttaggactcatttgggtt taatccaagttcctctgaaagtaaaagacatccctgaattggtaagtata cacattgaagactaaattagtggatattagaagataaccactagaaaaat attttagtgcagcatgtatatattataatcagagtcatagacatgttaga caaattactaaactgacatcctttttgttggaaatatgtatgtagaaaga gcaagtttatgtgtgtgcaagtcaaatatgcttacattggcttataactg ttttgtcctttctaataacaaaaaaatatttatgaggctgtttgatgtgt ggttataaatatggttttggggttgaagagg
quality values	Open. Hide. 34 31 26 28 58 58 39 14 62 62 54 49 62 31 20 62 62 54 47 47 62 62 62 62 62 62 49 62 62 62 56 44 44 32 38 32 33 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 54 54 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 54 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 43 49 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 49 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 43 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 54 62 47 62 62 62 62 33 58 54 41 58 58 58 58 54 58 54 54 52 52 58 54 54 54 52 52 52 54 49 58 54 52 41 58 52 58 58 52 58 52 54 58 58 58 52 48 44 43 52 52 54 54 47 52 52 58 48 58 37 58 52 52 58 54 52 54 35 42 42 52 58 43 58 45 49 54 58 54 54 54 47 54 52 54 49 51 58 58 58 30 35 42 45 58 51 41 33 58 53 40 45 58 46 33 51 41 29 54 50 51 50 58 49 50 49 51 58 58 58 50 49 35 52 46 58 58 58 43 46 50 50 46 50 46 58 58 58 47 39 58 49 51 53 53 54 58 58 58 40 50 38 41 35 49 49 47 49 51 49 41 40 58 39 39 53 40 39 58 53 50 58 54 34 53 53 39 58 50 50 58 36 36 58 58 46 39 58 58 53 39 35 50 58 50 54 44 51 38 42 25 39 41 49 43 58 26 39 58 35 54 49 36 30 33 19 22 29 50 49 39 31 37 51 35 54 33 32 38 54 51 54 40 41 18 40 34 53 42 53 45 39 24 39 29 50 42 42 39 35 30 54 34 33 54 35 26 52 44 36 54 40 52 30 30 31 19 53 37 31 39 25 39 54 54 37 47 54 54 47 33 31 49 44 25 7 6 12 33 28 41 28 42 24 31 32 41 28 53 52 28 32 52 32 31 31 32 32 32 33 32 49 49 40 36 31 26 37 41 33 20 26 19 49 32 31 31 47 46 46 51 31 36 34 18 29 31 31 51 51 26 31 22 31 35 36 35 38 25 18 11 5 17 22 28 8 21 42 32 29 26 18 30 34 37 21 12 29 19 41 23 30 46 46 46 46 27 31 30 46 46 32 22 16 30 22 30 30 30 46 46 46 27 26 35 48 35 27 31 36 32 15 24 19 25 24 31 32 39 21 36 21 21 30 48 46 11 20 17 33 16 27 16 31 23 46 19 27 31 24 21 21 35 32 17 44 44 44 31 17 31 48 48 21 26 21 22 34 31 9 6 31 9 31 16 11 11 13 21 48 10 7 16 8 5 20 12 33 11 26 21 30 21 14 26 11 13 9 13 19 21 8 8 10 7 16 23 34 21 15 27 24 28 27 27 9 16 7 6 14 25 11 5 18 15 24 10 5 4 5 19 24 15 21 24 16 6 27 9 36 15 24 9 11 8 6 5 6 13 9 6 18 7 3 21 22 8 9 6 7 13 7 5 7 11 10 8 9 13 9 7 31 9 23 11 14 14 5 9 27 7 5 4 20 8 13 27 10 10 4 3 9 6 7 7 21 10 9 27 18 8 18 5 7 8 19 8 3 5 12 5 7 6 3 1 2 8 7 9 22 17 28 5 15 4 12 10 8 10 8 7 13 13 8 2 8 13 11 11 25 17 10 5 6 7 7 4 6 6 6 4 6 13 11 6 6 8 4 9 7 5 5 3 6 8 8 3 10 11 6 4 6 4 3 7 5 4 3 3 1 4 12 9 6 4 5 2 2 3 3 3 6 6 6 6 14 4 7	Open. Hide. 62 47 39 44 62 62 62 62 62 43 18 38 28 28 33 28 27 38 43 43 62 54 62 62 62 62 62 62 62 59 49 62 62 59 62 59 62 62 62 62 59 62 62 62 62 62 62 59 62 54 54 59 59 56 62 62 62 62 62 54 62 62 59 59 62 62 62 62 62 59 62 62 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 59 62 62 62 62 62 62 62 59 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 54 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 59 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 54 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 56 56 38 38 27 38 24 44 62 62 54 62 62 62 56 62 62 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 37 46 62 62 62 62 42 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 56 62 62 62 62 54 47 47 47 62 62 62 62 62 62 62 62 62 62 56 62 56 62 56 56 56 46 28 43 62 62 62 62 62 47 47 62 62 62 62 62 62 62 48 62 62 62 62 62 41 62 62 62 62 49 62 62 62 62 62 39 52 36 29 48 42 52 47 47 62 47 62 47 39 58 54 58 58 58 54 54 43 54 27 30 32 34 33 35 54 54 58 58 54 58 50 39 52 58 58 58 35 42 39 31 52 54 47 46 52 58 58 42 54 58 58 58 50 54 58 54 54 39 54 39 50 27 37 35 41 54 58 58 58 52 54 46 54 47 58 58 52 58 58 37 52 58 54 54 50 50 41 48 54 32 50 47 34 41 26 46 50 42 44 37 51 58 50 41 58 51 51 49 47 48 46 46 58 58 28 29 46 40 48 50 29 20 30 22 33 50 58 46 58 35 53 36 46 46 39 50 50 37 39 36 22 16 49 23 51 52 22 51 40 39 36 35 50 51 58 36 48 41 32 58 29 18 58 37 29 37 40 51 30 21 58 50 31 51 50 50 43 12 53 53 29 32 32 36 58 54 46 26 52 51 24 29 58 32 38 39 33 42 33 39 31 31 37 37 50 39 50 22 15 50 31 31 16 6 12 24 39 33 32 41 53 39 49 21 52 24 46 32 37 32 25 54 41 28 49 35 29 32 37 39 37 42 39 29 31 31 35 33 47 27 36 54 39 32 29 37 39 37 24 54 25 51 49 49 49 19 37 51 41 54 40 37 20 19 31 25 23 23 31 23 21 26 22 51 52 31 15 26 20 46 38 32 32 24 38 13 40 27 28 27 8 40 26 31 41 28 32 31 31 17 51 21 12 25 16 29 38 47 38 29 30 30 51 51 29 46 40 18 46 30 32 19 9 13 25 18 6 5 9 10 7

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_54411267_54412454
seq2: B6Ng01-246E09.b_40_1247 (reverse)

seq1  TTCACATAGGAACA-GTCTTCATTCTTGTTT-GCTTCA-GTAATCATAGA  47
      ||||||||||| || ||| ||| || ||||| |||||| ||| |||||||
seq2  TTCACATAGGACCAGGTCCTCAATCCTGTTTAGCTTCAGGTATTCATAGA  50

seq1  ACT--GATTTAATTCCTTTATAATGTTTT-CAACCAGATATTAAGTTTTA  94
      |||  |||||||||| || |||||||||| ||| ||||   ||||||| |
seq2  ACTCGGATTTAATTCTTTAATAATGTTTTCCAAGCAGAATATAAGTTTAA  100

seq1  AT-GCATCTGTGTT-GTGTTGTCTGTT-CTCAGCC-ATG-TGAATTGGAG  139
       | ||||||||||| |||| ||||||| ||||||| ||| |||| |||||
seq2  TTGGCATCTGTGTTGGTGTGGTCTGTTCCTCAGCCAATGTTGAAATGGAG  150

seq1  -CTGTGG-AAGGAGTGGGCCCAAGCCGTT-CTTGATCATGCAGTG-TGGA  185
       |||||| |||||||||| |||||||||| ||||||||||||||| ||||
seq2  ACTGTGGAAAGGAGTGGGACCAAGCCGTTCCTTGATCATGCAGTGTTGGA  200

seq1  GATTGTGC-TACTAT--CTTCTGTAC-TCTTCTGAAAACTTTTTGGATAA  231
      || ||||| ||||||   |||||||| |||||||||||||||||||||||
seq2  GAATGTGCTTACTATTCTTTCTGTACTTCTTCTGAAAACTTTTTGGATAA  250

seq1  TAAACATCTTA-TTTCACACATTATGTGCATAAACTTTTTACTGTATTTT  280
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAAACATCTTATTTTCACACATTATGTGCATAAACTTTTTACTGTATTTT  300

seq1  ATTTTTTCTCTCTGAGTATCCATGAATGTTATAGTACAAAAGAATATTTT  330
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATTTTTTCTCTCTGAGTATCCATGAAAGTTATAGTACAAAAGAATATTTT  350

seq1  TTACCCATGCATGTTTTTAACTGATTTAAAACATATCTTATGGTTTTGAA  380
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCATGCATGTTTTTAACTGATTTAAAACATATCTTATGGTTTTGAA  400

seq1  AATAAATGATATGTTGTTTCAATTTCCATTTTTTAATCAGATAGTCTTTC  430
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATGATATGTTGTTTCAATTTCCATTTTTTAATCAGATAGTCTTTC  450

seq1  TTTCTCTGAACTTAGAAATGGAAAGTATGGCAAACAGTAAAACAAATTTC  480
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTGAACTTAGAAATGGAAAGTATGGCAAACAGTAAAACAAATTTC  500

seq1  TCTTACCAGAATAACCATTTTAGGATTATTTTTATGTGCAGCATGTATTG  530
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACCAGAATAACCATTTTAGGATTATTTTTATGTGCAGCATGTATTG  550

seq1  TTTTATGTAAATGTGTTATGGTGTGAATGAATCCCTGTCCCCAGCTTACA  580
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGTAAATGTGTTATGGTGTGAATGAATCCCTGTCCCCAGCTTACA  600

seq1  CAGAGGGGACCTTAGCTTCTCGGGGGAGGGTTAGGGTTGCTCCTCTGGGA  630
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGGACCTTAGCTTCTCGGGGGAGGGTTAGGGTTGCTCCTCTGGGA  650

seq1  GGGGACCAGGACACAGCATCCTCCCCTACAGGGAATAGGTACTCTATAGA  680
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACCAGGACACAGCATCCTCCCCTACAGGGAATAGGTACTCTATAGA  700

seq1  AGATGATTCTGAAGGCTAATCAGACCCCTTTGCTCTTCTGTTATGGGAGG  730
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATTCTGAAGGCTAATCAGACCCCTTTGCTCTTCTGTTATGGGAGG  750

seq1  ACGTAACAAAAGAGTGCCCTCACCATAGGTGGCCCCACGTGTTGAGGATT  780
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTAACAAAAGAGTGCCCTCACCATAGGTGGCCCCACGTGTTGAGGATT  800

seq1  TTGGCCTTTAGAATTGTGACCAGTAATTTCTGTTGTGAAGCAACTCAAAG  830
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCTTTAGAATTGTGACCAGTAATTTCTGTTGTGAAGCAACTCAAAG  850

seq1  GTATTTCTGTCATAGGATCTGAATGAATGAATATGAAATAGGAATTGTCA  880
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCTGTCATAGGATCTGAATGAATGAATATGAAATAGGAATTGTCA  900

seq1  TAGTTGCTCTTTTGCATCTTGCTTTCTAAAATCTAGCATATCTTGAGTTT  930
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGCTCTTTTGCATCTTGCTTTCTAAAATCTAGCATATCTTGAGTTT  950

seq1  TTCCTTAATTATTAAATGAAATTGAAGATATAAATTACTTATTCATTTTT  980
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTAATTATTAAATGAAATTGAAGATATAAATTACTTATTCATTTTT  1000

seq1  ATTGGATAGAGTCCTATTGGATAATTTTTTCCCCCAGTTTTTCTTTTATG  1030
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATAGAGTCCTATTGGATAATTTTTTCCCCCAGTTTTTCTTTTATG  1050

seq1  ATATTGCTTTGAGCAAATGTGTACTTTTGGAGTTCTGGGCTTTAAGTTTA  1080
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGCTTTGAGCAAATGTGTACTTTTGGAGTTCTGGGCTTTAAGTTTA  1100

seq1  TTTTTAGTTTTTGAGACTTTCAAACAGGAGTACACTGTATTTACATAATT  1130
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGTTTTTGAGACTTTCAAACAGGAGTACACTGTATTTACATAATT  1150

seq1  TCCACCCTCTCACCTCCAACACCTCTTGTTTTCCCCAACTTCAATCTCTC  1180
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCCTCTCACCTCCAACACCTCTTGTTTTCCCCAACTTCAATCTCTC  1200

seq1  TGGAATTC  1188
      ||||||||
seq2  TGGAATTC  1208

seq1: chr5_54228886_54229766
seq2: B6Ng01-246E09.g_67_947

seq1  GAATTCCCTAGAATGTATTATTTGTATTCCAAGTACTTTGAAATTCTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTAGAATGTATTATTTGTATTCCAAGTACTTTGAAATTCTCAA  50

seq1  ACAGAATCTTTGTAAGGAACTCTGAAAATCTTCTTTAGTTTGTTGTTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATCTTTGTAAGGAACTCTGAAAATCTTCTTTAGTTTGTTGTTTAA  100

seq1  GTTGTCAAATACAGGGTTTTTATTTCTGTGTTTCCGGTGTCTCAGATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCAAATACAGGGTTTTTATTTCTGTGTTTCCGGTGTCTCAGATAAT  150

seq1  GCACAACAAATAATCAATCACTATAATTATGTGGTTCTTCTCTGTAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAACAAATAATCAATCACTATAATTATGTGGTTCTTCTCTGTAGAAA  200

seq1  CACAGGAAAGTGACATTAATATCTACTGGTCATTTCATAGATTATCTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGAAAGTGACATTAATATCTACTGGTCATTTCATAGATTATCTGAA  250

seq1  ATTTTGTTTTACTTTAACTCATTCTAGATTTAAGCCTTTTTCGACCCGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTTTACTTTAACTCATTCTAGATTTAAGCCTTTTTCGACCCGTT  300

seq1  TATGCACCTAAGGACTTTCTTGAGGTATGTTCTATCAGGTATATATGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACCTAAGGACTTTCTTGAGGTATGTTCTATCAGGTATATATGCAG  350

seq1  ATATGATGGGTGTAATTGAAGAGCCATGCATGACCCTGAATGGCTTTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATGGGTGTAATTGAAGAGCCATGCATGACCCTGAATGGCTTTTTA  400

seq1  ACCTGAGGTGATACAAGAATTATGTTTGGCAAGGGAAAGCATATAAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAGGTGATACAAGAATTATGTTTGGCAAGGGAAAGCATATAAAGAA  450

seq1  ACTAACCAGGCTTGTTGTTTATTTTTAAAGGTATTAATTAATCTCCGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACCAGGCTTGTTGTTTATTTTTAAAGGTATTAATTAATCTCCGCAA  500

seq1  CCCAAATTATGAAAATGGTGATTCTCTTAGTTTTAGGACTCATTTGGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAATTATGAAAATGGTGATTCTCTTAGTTTTAGGACTCATTTGGGTT  550

seq1  TAATCCAAGTTCCTCTGAAAGTAAAAGACATCCCTGAATTGGTAAGTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCAAGTTCCTCTGAAAGTAAAAGACATCCCTGAATTGGTAAGTATA  600

seq1  CACATTGAAGACTAAATTAGTGGATATTAGAAGATAACCACTAGAAAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTGAAGACTAAATTAGTGGATATTAGAAGATAACCACTAGAAAAAT  650

seq1  ATTTTAGTGCAGCATGTATATATTATAATCAGAGTCATAGACATGTTAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGTGCAGCATGTATATATTATAATCAGAGTCATAGACATGTTAGA  700

seq1  CAAATTACTAAACTGACATCCTTTTTGTTGGAAATATGTATGTAGAAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTACTAAACTGACATCCTTTTTGTTGGAAATATGTATGTAGAAAGA  750

seq1  GCAAGTTTATGTGTGTGCAAGTCAAATATGCTTACATTGGCTTATAACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTTTATGTGTGTGCAAGTCAAATATGCTTACATTGGCTTATAACTG  800

seq1  TTTTGTCCTTTCTAATAACAAAAAAATATTTATGAGGCTGTTTGATGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCCTTTCTAATAACAAAAAAATATTTATGAGGCTGTTTGATGTGT  850

seq1  GGTTATAAATATGGTTTTGGGGTTGAAGAGG  881
      |||||||||||||||||||||||||||||||
seq2  GGTTATAAATATGGTTTTGGGGTTGAAGAGG  881

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BAC

BAC End Information

Alignment Information