BAC Information

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BAC

Clone NameB6Ng01-246P10
Chromosome5 (Build37)
Map Location 91,314,945 - 91,315,209
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665733, Cox18, Ankrd17, Alb1, Afp, Afm, LOC100040105, LOC622307, Rassf6, Cxcl5, Ppbp, Cxcl4, Gm1960, Cxcl15
Downstream geneCxcl1, Cxcl2, 1110019K23Rik, Epgn, Ereg, Areg, Btc, 9130213B05Rik, EG665860, LOC665864, LOC100040506, Ppia-ps5_892.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246P10.bB6Ng01-246P10.g
ACCGA055430GA055431
length1,205266
definitionB6Ng01-246P10.b B6Ng01-246P10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttaatg
ggattttctgaagtccaccttcttgagttctttatatatgttggatatta
gtcccctatctgattgaggataggtaaagatcctttcccaatctgttggt
ggtcttttcgtcttattgacagtgtcttttgccttgcagaaactttggag
tttcattaggtcccatttgtcaattctcgatcttacagcacaagctattg
ctgttctgttcaggaatttttcccctgtgcccatatcttcaaggcttttc
cccactttctcctctataagtttcagtgtctctggttttatgtgaagttc
cttgatccacttagatttgaccttagtacaaggagataagtatggatcga
ttcgcattcttctacatgataacaaccagttgtgccagcaccaattgttg
aaaatgctgtctttcttccactggatggttttagctcccttgtcgaagat
caagtgaccataggtgtgtgggttcatttctgggtcttcaattctattcc
attggtctacttgtctgtctctataccagtaccatgcagtttttatcaca
attgctctgtagtaaagctttaggtctggcatggtgattcggccagaagt
tcttttatccttgagaagactttttgctatcctaggttttttgttattcc
agacaaatttgcaaattgctccttccaattcgttgaagaattgagttgga
attttgatggggattgcattgaatctgtagattgcttttggcaagatagc
catttttacaatgtttatcctgccaatccatgagcatgggagatctttcc
atcttctgagatcttctttaatttctttcttcagagatttgaagttttta
tcatacagatctttcacctccttagttagagtcacgcccagatatttata
ttatttgtgactattgagaagggtgtgtttccttaatttctttctcagcc
tgtttattcttttgttatagaagaaagcccattggactgtttgagttatt
taatatccagctacttccaccgaagctgttttatcagttaggagtctctg
tagaattttttagggtcactataattaccttatctaatcattcttgcaaa
gtgaattcgacttccctttccaatttggtatccccctgtgacatcctcct
tatag
cagaattcaaaggggttgggaatacctgagaatttcatggtgaatttgaa
gcatttggtgttgcaaataaacaacaagagttgcctagtcttgtttctgt
tgctataacagaatgctatggattgagtagcttagagagtaaatgaattt
acctcttactgttctggacattggaggttggtgagttccagagtatggta
ctgatgagggccttgatgagcatcataacgttgtcaaggagtaagtcatc
aggtgaggcagggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_91314945_91315209
seq2: B6Ng01-246P10.g_78_343

seq1  CAGAATTC-CTGGTGTTGGGAATACCTGAGAATTTCATGGTGAATTTGAA  49
      ||||||||   || ||||||||||||||||||||||||||||||||||||
seq2  CAGAATTCAAAGGGGTTGGGAATACCTGAGAATTTCATGGTGAATTTGAA  50

seq1  GCATTTGGTGTTGCAAATAAACAACAAGAGTTGCCTAGTCTTGTTTCTGT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGGTGTTGCAAATAAACAACAAGAGTTGCCTAGTCTTGTTTCTGT  100

seq1  TGCTATAACAGAATGCTATGGATTGAGTAGCTTAGAGAGTAAATGAATTT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATAACAGAATGCTATGGATTGAGTAGCTTAGAGAGTAAATGAATTT  150

seq1  ACCTCTTACTGTTCTGGACATTGGAGGTTGGTGAGTTCCAGAGTATGGTA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTTACTGTTCTGGACATTGGAGGTTGGTGAGTTCCAGAGTATGGTA  200

seq1  CTGATGAGGGCCTTGATGAGCATCATAACGTTGTCAAGGAGTAAGTCATC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGAGGGCCTTGATGAGCATCATAACGTTGTCAAGGAGTAAGTCATC  250

seq1  AGGTGAGGCAGGGAGA  265
      ||||||||||||||||
seq2  AGGTGAGGCAGGGAGA  266