BAC Information

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BAC

Clone NameB6Ng01-249F21
Chromosome5 (Build37)
Map Location 119,213,711 - 119,423,486
singlet/doubletdoublet
Overlap genenone
Upstream geneNos1, Fbxo21, Tesc, Fbxw8, Hrk, Tmem118, 2410131K14Rik, LOC665162, Thrap2
Downstream geneLOC100039488, EG665194, LOC100039529, LOC100039542, Tbx3, EG433945, Tbx5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249F21.bB6Ng01-249F21.g
ACCGA057207GA057208
length851,092
definitionB6Ng01-249F21.b B6Ng01-249F21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,423,402 - 119,423,486)(119,213,711 - 119,214,781)
sequence
cagatgaaaatatctgctctacgaggttcatggaagaagggaggaggaga
gaggagactagaggagagaggagtgggtagaggga
gaattcttacagaaagccaggtctctcctttcattagatcaaaagggact
cgtgtacatatcacaaccaaagtgtttgctcacgaaaccagttacaaaca
cagtgaattttttctggaccataggaatattgtttcaaagaaatagtgca
actcaaccgttacatcagtacttgaagctgagcctctatgtgggacttta
aaaaaaaaaaaaaaagcctttttaaagcattcgcagctgattgaagtatt
cttgactccctgtcccagaccttagggttgactttgaaaccctgtttcta
gcccttatgtcgtatgtttctgtctgtgggtggtgggtgtagaccggctt
cccagagcctcctgacaggcccggcactgagcccggctcccgtgggagag
tcatgcaaactaagttcttccaagagactttcatgtcctggttattaaca
aagaaaaggaaaaaaatgtaataattgatatggttttgtaaaagtatttt
tcttgagataatctaacgtttaaaacattatattaacatgtggtggggat
gtgaaagcagagaaataacttgtacatgggtgactgttctctgtctcacc
aactgggggggttgctttccaatgtatagcttaaaaaatctgatatatca
aaccgtttgtatctaacgtgtacagtgtaaaattgacttaaaatatcgca
gttgctattttttttcttatcagcgaggaaatcctcaaggcctttttgaa
gagcgtaagatgacggagattgtaaactttgtataaaagtcacctcgggg
aggacgggctgtaaactagatatttgtaatcctttaccaacttgggattg
cttcctctcagagtttcaccaagaacttttgaatttcctctctctctctc
cttctttttaaattgggcctgttttttacatgcaaggggctttttgcttc
cctagaataccccatctcttcgccgaaaaggtgaaaacggaaaaaatata
cctaattaaccctgaaaaaaaagctataaaagtttcacagagggagcaaa
tggttaatctctctctggtgtctttatataagtttttctaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_119423402_119423486
seq2: B6Ng01-249F21.b_52_136 (reverse)

seq1  TCCCTCTACCCACTCCTCTCTCCTCTAGTCTCCTCTCTCCTCCTCCCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTACCCACTCCTCTCTCCTCTAGTCTCCTCTCTCCTCCTCCCTTC  50

seq1  TTCCATGAACCTCGTAGAGCAGATATTTTCATCTG  85
      |||||||||||||||||||||||||||||||||||
seq2  TTCCATGAACCTCGTAGAGCAGATATTTTCATCTG  85

seq1: chr5_119213711_119214781
seq2: B6Ng01-249F21.g_68_1159

seq1  GAATTCTTACAGAAAGCCAGGTCTCTCCTTTCATTAGATCAAAAGGGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACAGAAAGCCAGGTCTCTCCTTTCATTAGATCAAAAGGGACT  50

seq1  CGTGTACATATCACAACCAAAGTGTTTGCTCACGAAACCAGTTACAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTACATATCACAACCAAAGTGTTTGCTCACGAAACCAGTTACAAACA  100

seq1  CAGTGAATTTTTTCTGGACCATAGGAATATTGTTTCAAAGAAATAGTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAATTTTTTCTGGACCATAGGAATATTGTTTCAAAGAAATAGTGCA  150

seq1  ACTCAACCGTTACATCAGTACTTGAAGCTGAGCCTCTATGTGGGACTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAACCGTTACATCAGTACTTGAAGCTGAGCCTCTATGTGGGACTTTA  200

seq1  AAAAAAAAAAAAAAAGCCTTTTTAAAGCATTCGCAGCTGATTGAAGTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAGCCTTTTTAAAGCATTCGCAGCTGATTGAAGTATT  250

seq1  CTTGACTCCCTGTCCCAGACCTTAGGGTTGACTTTGAAACCCTGTTTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACTCCCTGTCCCAGACCTTAGGGTTGACTTTGAAACCCTGTTTCTA  300

seq1  GCCCTTATGTCGTATGTTTCTGTCTGTGGGTGGTGGGTGTAGACCGGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTATGTCGTATGTTTCTGTCTGTGGGTGGTGGGTGTAGACCGGCTT  350

seq1  CCCAGAGCCTCCTGACAGGCCCGGCACTGAGCCCGGCTCCCGTGGGAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGCCTCCTGACAGGCCCGGCACTGAGCCCGGCTCCCGTGGGAGAG  400

seq1  TCATGCAAACTAAGTTCTTCCAAGAGACTTTCATGTCCTGGTTATTAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCAAACTAAGTTCTTCCAAGAGACTTTCATGTCCTGGTTATTAACA  450

seq1  AAGAAAAGGAAAAAAATGTAATAATTGATATGGTTTTGTAAAAGTATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAGGAAAAAAATGTAATAATTGATATGGTTTTGTAAAAGTATTTT  500

seq1  TCTTGAGATAATCTAACGTTTAAAACATTATATTAACATGTGGTGGGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGATAATCTAACGTTTAAAACATTATATTAACATGTGGTGGGGAT  550

seq1  GTGAAAGCAGAGAAATAACTTGTACATGGGTGACTGTTCTCTGTCTCACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAGCAGAGAAATAACTTGTACATGGGTGACTGTTCTCTGTCTCACC  600

seq1  AACTGGGGGGGTTGCTTTCCAATGTATAGCTTAAAAAATCTGATATATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGGGGGGTTGCTTTCCAATGTATAGCTTAAAAAATCTGATATATCA  650

seq1  AACCGTTTGTATCTAACGTGTACAGTGTAAAATTGACTTAAAATATCGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGTTTGTATCTAACGTGTACAGTGTAAAATTGACTTAAAATATCGCA  700

seq1  G-TGCTA--TTTTTTCTTATCAGCGAGGAAATCCTCAAGGCC-TTTTGAA  746
      | |||||  ||||||||||||||||||||||||||||||||| |||||||
seq2  GTTGCTATTTTTTTTCTTATCAGCGAGGAAATCCTCAAGGCCTTTTTGAA  750

seq1  GAGCGTAAGATGACGGAGA-TGTAAAC-TTGTAT-AAAGTCACCTCGGGG  793
      ||||||||||||||||||| ||||||| |||||| |||||||||||||||
seq2  GAGCGTAAGATGACGGAGATTGTAAACTTTGTATAAAAGTCACCTCGGGG  800

seq1  AGGACGGGCTGTAAACTAGATATTTGTAAT-CTTTACC-ACTTGGGATTG  841
      |||||||||||||||||||||||||||||| ||||||| |||||||||||
seq2  AGGACGGGCTGTAAACTAGATATTTGTAATCCTTTACCAACTTGGGATTG  850

seq1  CTTCCTCTCAGAG-TTCACC-AGAAC-TTTGAATTT-CTCTCTCTCTCTC  887
      ||||||||||||| |||||| ||||| ||||||||| |||||||||||||
seq2  CTTCCTCTCAGAGTTTCACCAAGAACTTTTGAATTTCCTCTCTCTCTCTC  900

seq1  --TCTTTTTTAAATGGG-CTG-TTTTTAC-TGC-AGGGGCTTTT--CTTC  929
        ||||||| || |||| ||| ||||||| ||| ||||||||||  ||||
seq2  CTTCTTTTTAAATTGGGCCTGTTTTTTACATGCAAGGGGCTTTTTGCTTC  950

seq1  CCTAGA--AACCCAACTCTACGCAGAAAAAGTGAAAA-GGAAAAAAAAAA  976
      ||||||  | |||| |||| ||| ||||| ||||||| |||||||| | |
seq2  CCTAGAATACCCCATCTCTTCGCCGAAAAGGTGAAAACGGAAAAAATATA  1000

seq1  CACAAAAAAAACCAGAAAAAAAAGCTATAAAAAGTTTTAAAAGAAGGCAG  1026
      | | ||  || || |||||||||||||| |||||||| | |   ||| ||
seq2  C-CTAATTAACCCTGAAAAAAAAGCTAT-AAAAGTTTCACA--GAGGGAG  1046

seq1  CAAA-GGGTAGTTTCCATCTGGTGTCTTTTATTTAAGTTTTT-TAAG  1071
      |||| || || | ||  ||||||||| ||||| ||||||||| ||||
seq2  CAAATGGTTAATCTCTCTCTGGTGTC-TTTATATAAGTTTTTCTAAG  1092