BAC Information

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BAC

Clone NameB6Ng01-252J16
Chromosome5 (Build37)
Map Location 41,724,479 - 41,725,354
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC208522, Rab28, Bapx1, A230054D04Rik, LOC384308, LOC100040588
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252J16.bB6Ng01-252J16.g
ACCGA059554GA059555
length8621,152
definitionB6Ng01-252J16.b B6Ng01-252J16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttatctaaaataagcttgttctagcctttcttgcttttgctggg
aaattttatcttggaaacagaaatacagctatcgcacaaagatataaatc
aacaattgttttccttaaagccattttttcaattgttaatgattctttga
gaattttgacctttgtataacatttttggtcatatttaatccccctacct
atttccaaatccatcactacttctttatctctcagcattcttttccttct
aagaaccagagtttctgtccattatcatcaaggtgggagaatggcagcat
ccaggcaggcatggtgcaggaagagctgatagttctacatcctcatctga
aggctgttaggagaggattggtttctaagcagctagaataaggatcttaa
atggactgaacctctgaacctgtaagccagccccaattaaatgttatcct
tataaaattagtctcagtcatggtgtctgttcacaacactaaaaccctaa
gagaggaggtgtgggcaatttctgtcccaactcaaaatactcaaacaata
tttacatgtttaaaaagatgtttcatcagaggtttatataaactcattaa
acgacttagagtaaataattataaatgtagctaaaataagaagcacaccc
aaaagattaattctggacatatatcaatcactacaaacacagcagactga
gggggttacagaattcaaacctctatcatatccacaatatattttgactc
ccttggaacagaacatccattatatatttttttcaaatgatgtctcctga
ctagagtatgatcaagatattagtgtatccttgccaaaaaaaactgtgca
ttcatctgacat

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccggaggatcctgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagttattaaaaagaatgaatatatgaaattcctaggcaa
atggttggacctgaagggcatcatcctgagtgaggtaacccaatcacaaa
ggaactcacacaatatgtactcactaagtggatattagcccaacacctag
gatacccaagatataagatacaatttgctaaatgcatgaaactcaagaag
aacgaagaccaaagtgtggacactttgccccttcttagaattgggaacaa
aacacccatggaaggagttacagaaacaaaatttggagctgtgatgaaag
gatgcacatctagtgattgccatatccagggagccatcccataatcagct
tcgaaacgctgacaccattgcatacactagcaagattttgctgaaaggac
cctgatatagctgtctcttgtgagactattctggggcctagcaaacacag
aagtggatgctcacagtcagctattggatggatcacagggcccccaatgg
aggagctagagaaagtacccaaggagctaaaggaactgcatccctacagg
tggacacatatgaactaaccagtaccgagctctgacctctagctgcatat
tgtatcaaagatgctagtcgcatcactgcaagagagcccaatgacaggca
actttaatggcccagttcaggagcaagctaaagggatgggtgtgtttggc
ta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_41724479_41725354
seq2: B6Ng01-252J16.b_48_909

seq1  GAATTCTTATCTAAAATAAGCTTGTTCTAGCCTTTCTTGCTTTTGCTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATCTAAAATAAGCTTGTTCTAGCCTTTCTTGCTTTTGCTGGG  50

seq1  AAATTTTATCTTGGAAACAGAAATACAGCTATCGCACAAAGATATAAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTATCTTGGAAACAGAAATACAGCTATCGCACAAAGATATAAATC  100

seq1  AACAATTGTTTTCCTTAAAGCCATTTTTTCAATTGTTAATGATTCTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTGTTTTCCTTAAAGCCATTTTTTCAATTGTTAATGATTCTTTGA  150

seq1  GAATTTTGACCTTTGTATAACATTTTTGGTCATATTTAATCCCCCTACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTGACCTTTGTATAACATTTTTGGTCATATTTAATCCCCCTACCT  200

seq1  ATTTCCAAATCCATCACTACTTCTTTATCTCTCAGCATTCTTTTCCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCAAATCCATCACTACTTCTTTATCTCTCAGCATTCTTTTCCTTCT  250

seq1  AAGAACCAGAGTTTCTGTCCATTATCATCAAGGTGGGAGAATGGCAGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACCAGAGTTTCTGTCCATTATCATCAAGGTGGGAGAATGGCAGCAT  300

seq1  CCAGGCAGGCATGGTGCAGGAAGAGCTGATAGTTCTACATCCTCATCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCAGGCATGGTGCAGGAAGAGCTGATAGTTCTACATCCTCATCTGA  350

seq1  AGGCTGTTAGGAGAGGATTGGTTTCTAAGCAGCTAGAATAAGGATCTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGTTAGGAGAGGATTGGTTTCTAAGCAGCTAGAATAAGGATCTTAA  400

seq1  ATGGACTGAACCTCTGAACCTGTAAGCCAGCCCCAATTAAATGTTATCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACTGAACCTCTGAACCTGTAAGCCAGCCCCAATTAAATGTTATCCT  450

seq1  TATAAAATTAGTCTCAGTCATGGTGTCTGTTCACAACACTAAAACCCTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATTAGTCTCAGTCATGGTGTCTGTTCACAACACTAAAACCCTAA  500

seq1  GAGAGGAGGTGTGGGCAATTTCTGTCCCAACTCAAAATACTCAAACAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAGGTGTGGGCAATTTCTGTCCCAACTCAAAATACTCAAACAATA  550

seq1  TTTACATGTTTAAAAAGATGTTTCATCAGAGGTTTATATAAACTCATTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATGTTTAAAAAGATGTTTCATCAGAGGTTTATATAAACTCATTAA  600

seq1  ACGACTTAGAGTAAATAATTATAAATGTAGCTAAAATAAGAAGCACACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACTTAGAGTAAATAATTATAAATGTAGCTAAAATAAGAAGCACACCC  650

seq1  AAAAGATTAATTCTGGACATATATCAATCAACTACAAACACAGCAGACTG  700
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AAAAGATTAATTCTGGACATATATCAATC-ACTACAAACACAGCAGACTG  699

seq1  AGGGGGTTACAGAATTCAAACCTCTATCATATTCACAATATA-TTTGACT  749
      |||||||||||||||||||||||||||||||| ||||||||| |||||||
seq2  AGGGGGTTACAGAATTCAAACCTCTATCATATCCACAATATATTTTGACT  749

seq1  CCCTTGGAACAGAACATTCAATTATATATTTTTTTCAAATGATGTTCTCT  799
      |||||||||||||||| || |||||||||||||||||||||||||   ||
seq2  CCCTTGGAACAGAACA-TCCATTATATATTTTTTTCAAATGATGTCTCCT  798

seq1  GACTAGAGGTTATTGGATCAAGAATATTAAGGTGTATATCTTTGCCAAAA  849
      ||||||||  |||  ||||||| ||||||    || |||| |||||||||
seq2  GACTAGAG--TAT--GATCAAG-ATATTA----GTGTATCCTTGCCAAAA  839

seq1  AATAAACTGTGGCATTCATCATGACAT  876
      |  ||||||| ||||||||| ||||||
seq2  A--AAACTGT-GCATTCATC-TGACAT  862


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