BAC Information

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BAC

Clone NameB6Ng01-255F19
Chromosome5 (Build37)
Map Location 60,989,963 - 60,991,111
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546866, Cbfa2t2-ps1
Downstream geneLOC100041498, LOC666597, EG666610
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255F19.bB6Ng01-255F19.g
ACCGA061586GA061587
length1,1351,189
definitionB6Ng01-255F19.b B6Ng01-255F19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttaaagtttagctttttcaacttggctaaagactacctttaa
atttcaaatccattcaattttccatttgaaaactttagttgaaagcaatt
ttattagctccctgcttattcacgacagtacttgacttggtaaaataaat
ttcaggcttttgaaattgaagaagctcacaaacattcagaatatacccta
gaggtaacgtatagaaataatgggacacagatcttaaatgatcttataag
ctttgtcgaggagactttccttgtaacctcatttcccattctctacctac
ctatatatgtatatgtgtatatgtatacacacacacacacacattttata
tatatacaattcctgaaaaaatataattccagaaaaccataaattatggg
gatatttataaattatatatagaaatctttataattaatatcttatataa
agtcatatatataaattcaacaaaataaaaaatttctttcattttattct
gctactgtacaagcaaaactgggaagagcatattaaattcatgatttctg
gtttgttctgtttgcttaagaagatagtgactgaacaatactgtatgtca
gcagtttttgtaggagagctgacttttattgttgtgttatttaaagcaga
atatgtaacaaagtaccaagatgttctctcagtcattctcaatgattttt
ttacttgtgagaagattctcatttttctttcttcctctgtatttcatttc
ctattcagtgcaggtatcatatgcatgggttttccacaaaacaattgttg
aattaataaatacttaaacagcaataattatgtaactgtgatgcacaata
tttcattcagagagtatgagaaaaaagaaaacatccacagtacactaatg
agaggatccacgtggtgtagctgtttagtgcagacactgggaagaggaga
gcctttggacaggactgtgattaataactatatcattgtctgctgtagtt
ctgagcaggccttcaacatgcatgtctctgctggagtttgtatccctagg
ttctatgtgtctctgacacatctctcaaataatttgggagcacggagcat
ctggacaaaagaagtgtttgtcctcgagcctgttc
gaattctcctctgaggaaacagactgggaggaagaagcagcccattacca
gccagctaattggtcaagaaaaaagccaaaagcggctggcgaaggccagt
ttgctaattggcctcagggcaatcggctaccaggtgcactcccgccctat
gcggagtccccgccctgcgtagtgcgtcagcccgtagtgcgtcagcaatg
cgcagagaggcagtgcgcagagaggcagtgcgcagactcattcattcccc
gagaggaacaaaggaaaatacaacaggcatttccagtctttgaaggagcc
gagggtgggcgtgtccacgctccggtagaatacttacaaattaaagaaat
tgctgagtcggtccgtaaatacggaaccaatgctaattttaccttggtgc
agttagacaggctcgctggcatggcactaactcctgctgactggcaaatg
attgcaaaagccgctctccctaatatgggcaaatatttggaatggagatc
tctgtggcgagaggctgcacaggcgcaggaccgagcaaacgctgctgctt
taactccagagcagagagattggacttttgacttgttaacgggtcagaga
gcttattctgctaaacctgataagaggtatcaatggaaggtcttaccaca
gggaatgtccaatagtcctacaatgtgccagctttatatgcaagaagctc
ttttgccagtgagggaacaattcccctctttaattttgctcctttacatg
gatgacatcctcctgtgccataaagaccttaccatgctacaaaaggcata
tccttttctacttaaaactttaagtcagtggggtttacagatagccacag
aaaaggtccaaatttctgatacaggacaattcttgggctctgtggtgtcc
ccagataagattgtgccccaaaaggtagagataagaagagatcacctcca
taccttaatgattttcaaagctgttgggagatattaattggctcagacct
ttttaagattccttcgctgagtaaggcctttgtttagtatttagaggaga
tctcatatctcctccccttaggactcttactctagctgctacaggcctta
acaaaagtgaaatgcttacagaatgccaatacacgtatgagatcgcagct
cagtggtgcctagagacacgccatacaatgtgccaacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_60989963_60991111
seq2: B6Ng01-255F19.b_42_1176

seq1  GAATTCATTTAAAGTTTAGCTTTTTCAACTTGGCTAAAGACTACCTTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTAAAGTTTAGCTTTTTCAACTTGGCTAAAGACTACCTTTAA  50

seq1  ATTTCAAATCCATTCAATTTTCCATTTGAAAACTTTAGTTGAAAGCAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAATCCATTCAATTTTCCATTTGAAAACTTTAGTTGAAAGCAATT  100

seq1  TTATTAGCTCCCTGCTTATTCACGACAGTACTTGACTTGGTAAAATAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGCTCCCTGCTTATTCACGACAGTACTTGACTTGGTAAAATAAAT  150

seq1  TTCAGGCTTTTGAAATTGAAGAAGCTCACAAACATTCAGAATATACCCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGCTTTTGAAATTGAAGAAGCTCACAAACATTCAGAATATACCCTA  200

seq1  GAGGTAACGTATAGAAATAATGGGACACAGATCTTAAATGATCTTATAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAACGTATAGAAATAATGGGACACAGATCTTAAATGATCTTATAAG  250

seq1  CTTTGTCGAGGAGACTTTCCTTGTAACCTCATTTCCCATTCTCTACCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCGAGGAGACTTTCCTTGTAACCTCATTTCCCATTCTCTACCTAC  300

seq1  CTATATATGTATATGTGTATATGTATACACACACACACACACATTTTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATATGTATATGTGTATATGTATACACACACACACACACATTTTATA  350

seq1  TATATACAATTCCTGAAAAAATATAATTCCAGAAAACCATAAATTATGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACAATTCCTGAAAAAATATAATTCCAGAAAACCATAAATTATGGG  400

seq1  GATATTTATAAATTATATATAGAAATCTTTATAATTAATATCTTATATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTATAAATTATATATAGAAATCTTTATAATTAATATCTTATATAA  450

seq1  AGTCATATATATAAATTCAACAAAATAAAAAATTTCTTTCATTTTATTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATATATATAAATTCAACAAAATAAAAAATTTCTTTCATTTTATTCT  500

seq1  GCTACTGTACAAGCAAAACTGGGAAGAGCATATTAAATTCATGATTTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTGTACAAGCAAAACTGGGAAGAGCATATTAAATTCATGATTTCTG  550

seq1  GTTTGTTCTGTTTGCTTAAGAAGATAGTGACTGAACAATACTGTATGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTCTGTTTGCTTAAGAAGATAGTGACTGAACAATACTGTATGTCA  600

seq1  GCAGTTTTTGTAGGAGAGCTGACTTTTATTGTTGTGTTATTTAAAGCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTTTGTAGGAGAGCTGACTTTTATTGTTGTGTTATTTAAAGCAGA  650

seq1  ATATGTAACAAAGTACCAAGATGTTCTCTCAGTCATTCTCAATGATTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAACAAAGTACCAAGATGTTCTCTCAGTCATTCTCAATGATTTTT  700

seq1  TTACTTGTGAGAAGATTCTCATTTTTCTTTCTTCCTCTGTATTTCATTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTGTGAGAAGATTCTCATTTTTCTTTCTTCCTCTGTATTTCATTTC  750

seq1  CTATTCAGTGCAGGTATCATATGCATGGGTTTTCCACAAAACAATTGTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCAGTGCAGGTATCATATGCATGGGTTTTCCACAAAACAATTGTTG  800

seq1  AATTAATAAATACTTAAACAGCAATAATTATGTAACTGTGATGCACAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATAAATACTTAAACAGCAATAATTATGTAACTGTGATGCACAATA  850

seq1  TTTCATTCAGAGAGTATGAGAAAAAAGAAAACATCCACAGTACACTAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTCAGAGAGTATGAGAAAAAAGAAAACATCCACAGTACACTAATG  900

seq1  AGAGGATCCACGTGGTGTAGCTGTTTAGTGCAGACACTGGGAAGAGGAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGATCCACGTGGTGTAGCTGTTTAGTGCAGACACTGGGAAGAGGAGA  950

seq1  GCCTTTGGACAAGGACTGTGATTAATAACTATTATCATTGTCTGCCTGTA  1000
      |||||||||| |||||||||||||||||||| |||||||||||| |||||
seq2  GCCTTTGGAC-AGGACTGTGATTAATAACTA-TATCATTGTCTG-CTGTA  997

seq1  GTTCTTGAGCAGGCCTTCAAACATGCATGTCTCTGCCTGGAGTTTGTAAT  1050
      |||| ||||||||||||| |||||||||||||||| ||||||||||| ||
seq2  GTTC-TGAGCAGGCCTTC-AACATGCATGTCTCTG-CTGGAGTTTGT-AT  1043

seq1  CCCTAGGTTCTAATTGTGTCTTCTTGACCACATCTCTCAAATTATTTGGG  1100
      ||||||||||||  |||||||   ||| |||||||||||||| |||||||
seq2  CCCTAGGTTCTA--TGTGTCT--CTGA-CACATCTCTCAAATAATTTGGG  1088

seq1  AGCACGAAGCATCTGGACCAAAGAAGTGTTTTGTCCCTTCGAG-CTGTTC  1149
      |||||| ||||||||||| ||||||||| |||||||  ||||| ||||||
seq2  AGCACGGAGCATCTGGACAAAAGAAGTG-TTTGTCC--TCGAGCCTGTTC  1135