BAC Information

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BAC

Clone NameB6Ng01-259G16
Chromosome5 (Build37)
Map Location 4,334,685 - 4,334,908
singlet/doubletsinglet
Overlap genenone
Upstream geneCdk6, 5830415L20Rik, 1700109H08Rik, C030048B08Rik, Pex1, Gatad1, 4930511M11Rik, Ankib1, Krit1, 4932412H11Rik, LOC100041009, LOC667617, Mterf, Akap9, Cyp51, ENSMUSG00000053178, LOC100041073
Downstream geneFzd1, LOC667678, Pftk1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259G16.bB6Ng01-259G16.g
ACCGA064602GA064603
length1,061118
definitionB6Ng01-259G16.b B6Ng01-259G16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagttctgtaccccattttaaaattggattatttggtt
tttagaagtctaacttcttgagttctttacatcttttggatattagtcct
tagctggatatagggttggtgaaggtcttttcccagtctgtacgctgctg
ttttgtcctatcgacagtgttctttgccttacaaaagcttttcagttctt
tgaggtcccatttgttaattgttgatcttcagtgcctgagccattaatgt
tctgtttaggaatttttttcctgtgccaatgtattcaaaattatttacca
ctttctctttttttagattcagtgtatctggttttatgttgaggtccttg
atccacttggacttgagatttgtgcagggtgataaatatggatccatttg
cattcttctacatgcaaacagtcagtagatgagcctttgttttgttgaag
atgctgtctctccccccccacattgtatggttgtggcttctttgtcaaaa
atcaagtgtccataggtgtgtaggtttatttctgggtcttagattctatt
tcattgatcaacctgtctgcttctgtactgatacgatgtggagttttttt
ttttttcccactattgctctgtagtacagcttgaagtcaggatagtgatt
cctccagtggttcttttactgttcaggattgttttggttatcctggactt
ttgtttttccaaatgtagttgagaattgctctttcaatttatgtaaaaac
ttgtgttggaattttgatgggtattgcattgaatctgctgattgcttttg
gtaagatggccattttcacttatttgtggatattgtgaagggtgttgctc
ccctaatttctttcttagcccatttatcatttgtataaagaagggcctac
tgagttaattttttaaaaaattattttatttattttcatcccaaatgata
tccatccactttatttatcagctgaagatgttctcttgtagattttgtgg
gttgcttaggtatacatatcatatatttctaacaaatagtgatgggtcaa
ccttacttcaa
tgcatgcaagactgtgagagagagagagagagagagagagagagagagag
agagagagtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtttg
tgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_4334685_4334908
seq2: B6Ng01-259G16.g_85_190 (reverse)

seq1  CACACACACACACACTCTCTCTCTCTCTCTCTCTCACACACACACACACA  50
      ||||||||||||||                    |||||| |||||||||
seq2  CACACACACACACA--------------------CACACAAACACACACA  30

seq1  CACACAAGCTCTCTCTCTCTCATACACACACACACACACACTTTCTCACT  100
      ||||||              ||||||||||||||||||||      ||| 
seq2  CACACA--------------CATACACACACACACACACA------CACA  60

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACTCTCTCT  150
      ||||||||||||||||||||||||||||              ||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCT--------------CTCTCTCT  96

seq1  CTCTCTCACATACACACACACAAACGCTCACACACGCTCTCTCTCTCTCT  200
      ||||||||||                                        
seq2  CTCTCTCACA----------------------------------------  106

seq1  CTCTCTCTCTCTCTCTCTCTCACA  224
                              
seq2  ------------------------  106